prot_H-elongata_contig97973.17148.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97973.17148.1
Unique Nameprot_H-elongata_contig97973.17148.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length96
Homology
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BLAST of mRNA_H-elongata_contig97973.17148.1 vs. uniprot
Match: D7G695_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G695_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 1.330e-30
Identity = 61/96 (63.54%), Postives = 74/96 (77.08%), Query Frame = 0 
Query:    1 VVDTEEVIPGGVMVTPRPLIPKANQLEEKRARLARWQEDPSLIANDMAVQREAVSRAEEKDAMVEAEQEAWERWYFSLRAHLIARRRPTVSWSRTA 96
            V+  EEV PG V  TPRP +PKANQLE KRAR+ARW++DPS +  DMA QREA+ +AEE+D  +EAE++AWERWY  LRAHL A RRPT +WS  A
Sbjct:  120 VLQPEEVAPGAVQATPRPPMPKANQLEPKRARMARWKKDPSEMEKDMAKQREALKKAEEEDEQLEAERDAWERWYLVLRAHLTAGRRPTATWSPAA 215
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BLAST of mRNA_H-elongata_contig97973.17148.1 vs. uniprot
Match: A0A6H5KJ15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ15_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 3.390e-30
Identity = 61/96 (63.54%), Postives = 73/96 (76.04%), Query Frame = 0 
Query:    1 VVDTEEVIPGGVMVTPRPLIPKANQLEEKRARLARWQEDPSLIANDMAVQREAVSRAEEKDAMVEAEQEAWERWYFSLRAHLIARRRPTVSWSRTA 96
            V+  EEV PG V  TPRP +PKANQLE KRAR+ARW++DPS I  DMA QREA+ +AE++D  +EAE+ AWERWY  LRAHL A RRPT +WS  A
Sbjct:  103 VLQPEEVAPGAVQATPRPPMPKANQLEPKRARMARWKKDPSEIEKDMAKQREALKKAEKEDEQLEAERHAWERWYLVLRAHLTAGRRPTATWSPAA 198
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97973.17148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G695_ECTSI1.330e-3063.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJ15_9PHAE3.390e-3063.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97973contigH-elongata_contig97973:233..1121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97973.17148.1mRNA_H-elongata_contig97973.17148.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97973 233..1121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97973.17148.1 ID=prot_H-elongata_contig97973.17148.1|Name=mRNA_H-elongata_contig97973.17148.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
VVDTEEVIPGGVMVTPRPLIPKANQLEEKRARLARWQEDPSLIANDMAVQ
REAVSRAEEKDAMVEAEQEAWERWYFSLRAHLIARRRPTVSWSRTA
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