prot_H-elongata_contig97957.17145.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97957.17145.1
Unique Nameprot_H-elongata_contig97957.17145.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length137
Homology
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BLAST of mRNA_H-elongata_contig97957.17145.1 vs. uniprot
Match: D8LJB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB6_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 7.730e-20
Identity = 70/149 (46.98%), Postives = 86/149 (57.72%), Query Frame = 0 
Query:    1 VRRDLERNGKGD-ASEGEWAEVQLELIRQERAVVADAHEMRARRARLEKTRRHIKGLERRAESVSPSIPGQNLPRRTFGE---TSPLPIVKMGDPEV----SSRFAV---ERRWST-LAEDVILRDADGGVRLMPLRKLPRKRGGSVEG 137
            VR DLE+ GK D  S+GEWAEVQLELIRQERAVVA A+EMRARRARL+  RR I  LE+ A    P  PG +   R   +     P P+ +  +         R  V   E  W+    E+ ++RDA+ GVRLMPL  LP KR    +G
Sbjct:  395 VRGDLEKEGKNDDTSDGEWAEVQLELIRQERAVVARANEMRARRARLDTLRRDIIDLEKHARLTRPLPPGNSREHRQHQDKFLVPPQPVPQEAESVALMPSGCRAGVGDEEPSWAAEFVEEEVIRDAETGVRLMPL--LPTKRDREQDG 541
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97957.17145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJB6_ECTSI7.730e-2046.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97957contigH-elongata_contig97957:1483..2115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97957.17145.1mRNA_H-elongata_contig97957.17145.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97957 1483..2115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97957.17145.1 ID=prot_H-elongata_contig97957.17145.1|Name=mRNA_H-elongata_contig97957.17145.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
VRRDLERNGKGDASEGEWAEVQLELIRQERAVVADAHEMRARRARLEKTR
RHIKGLERRAESVSPSIPGQNLPRRTFGETSPLPIVKMGDPEVSSRFAVE
RRWSTLAEDVILRDADGGVRLMPLRKLPRKRGGSVEG
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