prot_H-elongata_contig97936.17142.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97936.17142.1
Unique Nameprot_H-elongata_contig97936.17142.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length104
Homology
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BLAST of mRNA_H-elongata_contig97936.17142.1 vs. uniprot
Match: D7FQP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP3_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.990e-25
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:   49 MLQQWLRDRCVPVVATLVTEDADLACRKNNVSFEQLVSAFSRMDGLKVPFRSSSQQ 104
            MLQ+WLRDRCVPVVATLVTEDAD+ACRKN +SFEQLVSAF+RMDGLKVPFRSSSQQ
Sbjct:    1 MLQEWLRDRCVPVVATLVTEDADIACRKNGLSFEQLVSAFARMDGLKVPFRSSSQQ 56
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BLAST of mRNA_H-elongata_contig97936.17142.1 vs. uniprot
Match: A0A6H5JPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPY7_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 4.720e-25
Identity = 51/56 (91.07%), Postives = 56/56 (100.00%), Query Frame = 0 
Query:   49 MLQQWLRDRCVPVVATLVTEDADLACRKNNVSFEQLVSAFSRMDGLKVPFRSSSQQ 104
            MLQ+WLRDRCVPVVATLVTEDAD+ACRKN++SFEQLVSAF+RMDGLKVPFRSSSQQ
Sbjct:    1 MLQEWLRDRCVPVVATLVTEDADIACRKNSLSFEQLVSAFARMDGLKVPFRSSSQQ 56
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97936.17142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQP3_ECTSI1.990e-2591.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPY7_9PHAE4.720e-2591.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97936contigH-elongata_contig97936:792..1466 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97936.17142.1mRNA_H-elongata_contig97936.17142.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97936 792..1466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97936.17142.1 ID=prot_H-elongata_contig97936.17142.1|Name=mRNA_H-elongata_contig97936.17142.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp
DSRAGLIVHEETTSPAINRHQDTTTPNYDKKWKGARGRSAAAASNTTGML
QQWLRDRCVPVVATLVTEDADLACRKNNVSFEQLVSAFSRMDGLKVPFRS
SSQQ
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