prot_H-elongata_contig97860.17128.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig97860.17128.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI) HSP 1 Score: 85.9 bits (211), Expect = 1.450e-17 Identity = 43/90 (47.78%), Postives = 60/90 (66.67%), Query Frame = 0
Query: 2 LYKRKVGQDGKVEKYKYRLVAQGFWQVEGVNYTGKYSPTPSTAAIQMLLATAVAKDGELRHFDAENAFLTADIDEELYIEIPEEYHKFTG 91
+YK K DG +E+YK RLVAQGF Q+EG++Y +SP +++ LA AVAK EL D NAFL D++EE+Y+++PE + K TG
Sbjct: 130 IYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGF-KATG 218
BLAST of mRNA_H-elongata_contig97860.17128.1 vs. uniprot
Match: A0A2I0J196_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0J196_PUNGR) HSP 1 Score: 81.6 bits (200), Expect = 1.700e-17 Identity = 41/86 (47.67%), Postives = 55/86 (63.95%), Query Frame = 0
Query: 1 MLYKRKVGQDGKVEKYKYRLVAQGFWQVEGVNYTGKYSPTPSTAAIQMLLATAVAKDGELRHFDAENAFLTADIDEELYIEIPEEY 86
M+YK K DG VE+YK RLVA+GF QVEGV++ ++P ++ LLA AV K E+ D NAFL D+DEE+Y+ +P Y
Sbjct: 1 MVYKIKRWADGSVERYKARLVAKGFTQVEGVDFNETFAPVAKLVTVRCLLAVAVVKGWEIHQMDVNNAFLHGDLDEEVYMRLPPGY 86
BLAST of mRNA_H-elongata_contig97860.17128.1 vs. uniprot
Match: A0A438E4T4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4T4_VITVI) HSP 1 Score: 84.7 bits (208), Expect = 3.820e-17 Identity = 42/90 (46.67%), Postives = 59/90 (65.56%), Query Frame = 0
Query: 2 LYKRKVGQDGKVEKYKYRLVAQGFWQVEGVNYTGKYSPTPSTAAIQMLLATAVAKDGELRHFDAENAFLTADIDEELYIEIPEEYHKFTG 91
+YK K DG +E+YK RLVAQGF Q+EG++Y +SP +++ LA VAK EL D NAFL D++EE+Y+++PE + K TG
Sbjct: 599 IYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEMFSPVAKMTSVRWFLAVVVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGF-KATG 687
BLAST of mRNA_H-elongata_contig97860.17128.1 vs. uniprot
Match: A5BCC7_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BCC7_VITVI) HSP 1 Score: 84.3 bits (207), Expect = 5.250e-17 Identity = 42/90 (46.67%), Postives = 59/90 (65.56%), Query Frame = 0
Query: 2 LYKRKVGQDGKVEKYKYRLVAQGFWQVEGVNYTGKYSPTPSTAAIQMLLATAVAKDGELRHFDAENAFLTADIDEELYIEIPEEYHKFTG 91
+YK K DG +E+YK RLVAQGF Q+EG++Y +SP +++ LA VAK EL D NAFL D++EE+Y+++PE + K TG
Sbjct: 853 IYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGF-KATG 941
BLAST of mRNA_H-elongata_contig97860.17128.1 vs. uniprot
Match: A0A2K3JLR7_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3JLR7_TRIPR) HSP 1 Score: 79.0 bits (193), Expect = 8.960e-17 Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 0
Query: 2 LYKRKVGQDGKVEKYKYRLVAQGFWQVEGVNYTGKYSPTPSTAAIQMLLATAVAKDGELRHFDAENAFLTADIDEELYIEIPEEY 86
+YK K G+VEKYK RLVA+GF Q+EG ++ ++P ++ LL+ AVAK EL D NAFL D++EE+Y+++P+ Y
Sbjct: 31 VYKVKYKASGEVEKYKARLVAKGFTQIEGEDFNETFAPVAKMTTVRCLLSVAVAKGWELHQMDVSNAFLHGDLEEEVYMQVPDGY 115
BLAST of mRNA_H-elongata_contig97860.17128.1 vs. uniprot
Match: A0A2I0I0U1_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I0U1_PUNGR) HSP 1 Score: 81.3 bits (199), Expect = 9.480e-17 Identity = 41/85 (48.24%), Postives = 55/85 (64.71%), Query Frame = 0
Query: 2 LYKRKVGQDGKVEKYKYRLVAQGFWQVEGVNYTGKYSPTPSTAAIQMLLATAVAKDGELRHFDAENAFLTADIDEELYIEIPEEY 86
+YK K DG VE+YK RLVA+GF QVEGV++ ++P ++ LLA AVAK E+ D NAFL D+DEE+Y+ +P Y
Sbjct: 31 VYKIKRRADGSVERYKARLVAKGFTQVEGVDFNETFAPVAKLVTVRCLLAVAVAKGWEIHQMDVNNAFLHGDLDEEVYMRLPPGY 115
BLAST of mRNA_H-elongata_contig97860.17128.1 vs. uniprot
Match: UPI0006A6DEFC (uncharacterized protein LOC106336398 n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A6DEFC) HSP 1 Score: 83.6 bits (205), Expect = 9.760e-17 Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 0
Query: 6 KVGQDGKVEKYKYRLVAQGFWQVEGVNYTGKYSPTPSTAAIQMLLATAVAKDGELRHFDAENAFLTADIDEELYIEIPEEYHKFTG 91
K DG VE++K R+VA+G+ Q+EG++Y +SP +++LLA A AK + H D NAFL D+DEE+Y+++P+ Y + TG
Sbjct: 751 KYNPDGTVERHKSRVVAKGYTQLEGLDYLDTFSPVAKIGTLRLLLAVAAAKQWSITHLDVSNAFLNGDLDEEIYMKLPQGYEELTG 836
BLAST of mRNA_H-elongata_contig97860.17128.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 83.6 bits (205), Expect = 9.820e-17 Identity = 38/82 (46.34%), Postives = 59/82 (71.95%), Query Frame = 0
Query: 2 LYKRKVGQDGKVEKYKYRLVAQGFWQVEGVNYTGKYSPTPSTAAIQMLLATAVAKDGELRHFDAENAFLTADIDEELYIEIP 83
++K K G DG+VEKYK RLVAQGF QVEG++Y ++P + +I++LLA A D E+ D ++AFL +++EE+Y+++P
Sbjct: 1044 VFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVP 1125
BLAST of mRNA_H-elongata_contig97860.17128.1 vs. uniprot
Match: A0A2K3PNF5_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3PNF5_TRIPR) HSP 1 Score: 83.2 bits (204), Expect = 1.310e-16 Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 0
Query: 2 LYKRKVGQDGKVEKYKYRLVAQGFWQVEGVNYTGKYSPTPSTAAIQMLLATAVAKDGELRHFDAENAFLTADIDEELYIEIPEEYH 87
+YK K G+VEKYK RLVA+G+ QVEG ++ ++P ++ LL AVAK EL D NAFL D+DEE+Y+++PE YH
Sbjct: 371 VYKVKYKATGEVEKYKARLVAKGYTQVEGEDFNETFAPVAKMTTVRCLLTVAVAKGWELHQMDVSNAFLHGDLDEEVYMQVPEGYH 456
BLAST of mRNA_H-elongata_contig97860.17128.1 vs. uniprot
Match: A0A2Z7CXQ0_9LAMI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CXQ0_9LAMI) HSP 1 Score: 80.1 bits (196), Expect = 1.430e-16 Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 0
Query: 2 LYKRKVGQDGKVEKYKYRLVAQGFWQVEGVNYTGKYSPTPSTAAIQMLLATAVAKDGELRHFDAENAFLTADIDEELYIEIP 83
+YK K DG +++YK RLVA+G+ Q+EG +Y +SPT + LLA A +++ L HFD +N FL D+DEE+Y++IP
Sbjct: 31 VYKIKYNSDGSIDRYKVRLVAKGYMQIEGTDYFETFSPTAKLTTVCCLLAIASSRNWFLSHFDVQNTFLHGDLDEEVYMDIP 112 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97860.17128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig97860.17128.1 ID=prot_H-elongata_contig97860.17128.1|Name=mRNA_H-elongata_contig97860.17128.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bpback to top |