prot_H-elongata_contig97824.17125.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97824.17125.1
Unique Nameprot_H-elongata_contig97824.17125.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
BLAST of mRNA_H-elongata_contig97824.17125.1 vs. uniprot
Match: D8LJT6_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT6_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 8.360e-27
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0
Query:    1 KRTKRGFSKRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQVR 56
            KR KRGFSKRVTLRDLERYFEYPIEEVS+MMGVSTTIIKRLCRKYGIKRWPYRQ+R
Sbjct:   96 KRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIR 151          
BLAST of mRNA_H-elongata_contig97824.17125.1 vs. uniprot
Match: A0A6H5K0H9_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H9_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.430e-26
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = 0
Query:    1 KRTKRGFSKRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQVR 56
            KR KRGFSKRVTLRDLERYFEYPIE+VS+MMGVSTTIIKRLCRKYGIKRWPYRQ+R
Sbjct:   98 KRAKRGFSKRVTLRDLERYFEYPIEDVSKMMGVSTTIIKRLCRKYGIKRWPYRQIR 153          
BLAST of mRNA_H-elongata_contig97824.17125.1 vs. uniprot
Match: A0A835ZE41_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE41_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.920e-12
Identity = 25/45 (55.56%), Postives = 38/45 (84.44%), Query Frame = 0
Query:   11 VTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQV 55
            +TL DLERY+ +P+ E SR +G+S T++K++CR +GIKRWP+RQ+
Sbjct:    5 LTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQL 49          
BLAST of mRNA_H-elongata_contig97824.17125.1 vs. uniprot
Match: K8YW24_NANGC (Rwp-rk domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YW24_NANGC)

HSP 1 Score: 63.9 bits (154), Expect = 1.700e-10
Identity = 26/48 (54.17%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    9 KRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQVR 56
            K V+L +L RYF+ PIE+ +R +G+ +T++K++CR+Y IKRWPYRQV+
Sbjct:  325 KSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVK 372          
BLAST of mRNA_H-elongata_contig97824.17125.1 vs. uniprot
Match: A0A061G426_THECC (RWP-RK domain-containing protein n=4 Tax=Byttnerioideae TaxID=214909 RepID=A0A061G426_THECC)

HSP 1 Score: 63.5 bits (153), Expect = 2.150e-10
Identity = 23/48 (47.92%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    8 SKRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQV 55
            ++ +TL+D+E+YF  PIEE +R + +S T++K++CRKYG+ RWP+R++
Sbjct:  269 TRNLTLKDIEKYFHLPIEEAARRLDLSVTVLKKICRKYGVLRWPHRKI 316          
BLAST of mRNA_H-elongata_contig97824.17125.1 vs. uniprot
Match: A0A4D9CWV5_9STRA (RWP-RK domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWV5_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.330e-10
Identity = 26/48 (54.17%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    9 KRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQVR 56
            K V+L +L RYF+ PIE+ +R +G+ +T++K++CR+Y IKRWPYRQV+
Sbjct:  320 KSVSLVELRRYFDRPIEDAARAIGICSTLLKKICRRYHIKRWPYRQVK 367          
BLAST of mRNA_H-elongata_contig97824.17125.1 vs. uniprot
Match: A0A2P6VNE1_9CHLO (ABC(ATP-binding) family transporter: iron compound n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VNE1_9CHLO)

HSP 1 Score: 62.8 bits (151), Expect = 4.360e-10
Identity = 28/57 (49.12%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    1 KRTKRG-FSKRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQVR 56
            KRTK G +S  +T  ++E Y+  P EE SR +G+  TI+KR+CR+ GI +WPYRQ++
Sbjct:  291 KRTKGGRYSHEITKEEIELYYHLPCEEASRQLGIGLTILKRICRRLGIDKWPYRQLK 347          
BLAST of mRNA_H-elongata_contig97824.17125.1 vs. uniprot
Match: Q1KUV6_9ROSI (RWP-RK domain-containing protein n=1 Tax=Tarenaya spinosa TaxID=228870 RepID=Q1KUV6_9ROSI)

HSP 1 Score: 58.9 bits (141), Expect = 4.800e-10
Identity = 22/47 (46.81%), Postives = 38/47 (80.85%), Query Frame = 0
Query:   10 RVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQVR 56
            R+TL+D+ +YF  P+EE +R+M V  T++K++CR+ G+ RWP+R++R
Sbjct:   21 RLTLKDIGKYFHLPVEEAARIMKVCPTVVKKICRRGGLARWPHRKIR 67          
BLAST of mRNA_H-elongata_contig97824.17125.1 vs. uniprot
Match: A0A1U8LRZ5_GOSHI (protein RKD1-like n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8LRZ5_GOSHI)

HSP 1 Score: 59.3 bits (142), Expect = 5.420e-10
Identity = 21/48 (43.75%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    8 SKRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQV 55
            ++ +TL+++E YF  PIE+ ++ M  S T++K++CRKYG+ RWP+R++
Sbjct:   13 TRNLTLKEIENYFHLPIEKAAKKMEFSATVVKKICRKYGLSRWPHRKI 60          
BLAST of mRNA_H-elongata_contig97824.17125.1 vs. uniprot
Match: UPI000B799FC9 (uncharacterized protein LOC110659400 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B799FC9)

HSP 1 Score: 62.4 bits (150), Expect = 5.440e-10
Identity = 22/47 (46.81%), Postives = 38/47 (80.85%), Query Frame = 0
Query:   10 RVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRWPYRQVR 56
            ++TL+D + YF  PIEE +R+M +  T++K++CRKYG+ RWP+R+++
Sbjct:  258 KLTLKDFDPYFHLPIEEAARLMNICPTVVKKICRKYGMSRWPFRKIK 304          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97824.17125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJT6_ECTSI8.360e-2794.64Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5K0H9_9PHAE2.430e-2692.86RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835ZE41_9STRA2.920e-1255.56RWP-RK domain-containing protein (Fragment) n=1 Ta... [more]
K8YW24_NANGC1.700e-1054.17Rwp-rk domain-containing protein n=1 Tax=Nannochlo... [more]
A0A061G426_THECC2.150e-1047.92RWP-RK domain-containing protein n=4 Tax=Byttnerio... [more]
A0A4D9CWV5_9STRA2.330e-1054.17RWP-RK domain-containing protein n=2 Tax=Monodopsi... [more]
A0A2P6VNE1_9CHLO4.360e-1049.12ABC(ATP-binding) family transporter: iron compound... [more]
Q1KUV6_9ROSI4.800e-1046.81RWP-RK domain-containing protein n=1 Tax=Tarenaya ... [more]
A0A1U8LRZ5_GOSHI5.420e-1043.75protein RKD1-like n=1 Tax=Gossypium hirsutum TaxID... [more]
UPI000B799FC95.440e-1046.81uncharacterized protein LOC110659400 n=1 Tax=Hevea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 11..55
e-value: 3.7E-19
score: 68.4
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 1..56
score: 17.939
NoneNo IPR availablePANTHERPTHR46373FAMILY NOT NAMEDcoord: 4..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97824contigH-elongata_contig97824:1439..1606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97824.17125.1mRNA_H-elongata_contig97824.17125.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97824 1439..1606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97824.17125.1 ID=prot_H-elongata_contig97824.17125.1|Name=mRNA_H-elongata_contig97824.17125.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
KRTKRGFSKRVTLRDLERYFEYPIEEVSRMMGVSTTIIKRLCRKYGIKRW
PYRQVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom