prot_H-elongata_contig9708.17081.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9708.17081.1
Unique Nameprot_H-elongata_contig9708.17081.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length193
Homology
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BLAST of mRNA_H-elongata_contig9708.17081.1 vs. uniprot
Match: A0A6H5JRR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR9_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 3.590e-18
Identity = 62/99 (62.63%), Postives = 80/99 (80.81%), Query Frame = 0 
Query:   77 PGLRSTHFAPGYLGVAWPDPLEADTAGAAHDARARARILTRLEEAASRKVAEVXXXXXXXXXXXXXXXXXRNTLLEQRTRREIQEAVSEQERRLQRQLE 175
            PGLR+THFAPG++GVAWPDP E  +A    +A AR R+LT++EEA++RK+AEV    XXXXXXXXXX   RNT+LE++ R EI++A+ EQERRL+RQLE
Sbjct:  781 PGLRATHFAPGFVGVAWPDPFEEPSAVRQLNA-ARERVLTKIEEASARKIAEVEERAXXXXXXXXXXQKRRNTMLEKKVRGEIKDALEEQERRLRRQLE 878
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BLAST of mRNA_H-elongata_contig9708.17081.1 vs. uniprot
Match: D7FUQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ6_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 4.860e-18
Identity = 62/99 (62.63%), Postives = 79/99 (79.80%), Query Frame = 0 
Query:   77 PGLRSTHFAPGYLGVAWPDPLEADTAGAAHDARARARILTRLEEAASRKVAEVXXXXXXXXXXXXXXXXXRNTLLEQRTRREIQEAVSEQERRLQRQLE 175
            PGLR+THFAPG++GVAWPDP E   A    +A AR R+LT++EEA++RK+AEV    XXXXXXXXXX   RNT+LE++ R EI++A+ EQERRL+RQLE
Sbjct:  745 PGLRATHFAPGFVGVAWPDPFEEPAAVRQLNA-ARERVLTKIEEASARKIAEVEERAXXXXXXXXXXQKRRNTMLEKKVRGEIKDAMEEQERRLRRQLE 842
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9708.17081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRR9_9PHAE3.590e-1862.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUQ6_ECTSI4.860e-1862.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..139
NoneNo IPR availableCOILSCoilCoilcoord: 156..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9708contigH-elongata_contig9708:3809..4719 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9708.17081.1mRNA_H-elongata_contig9708.17081.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9708 3808..4719 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9708.17081.1 ID=prot_H-elongata_contig9708.17081.1|Name=mRNA_H-elongata_contig9708.17081.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=193bp
LETGRPPRKSTYPAQRVADGHSSRGAERKTMQKKQRQPPAGRRELRQTTG
KRLSVTETSKKTGAVVASEPASAAPGPGLRSTHFAPGYLGVAWPDPLEAD
TAGAAHDARARARILTRLEEAASRKVAEVEEKARRVQMERTDRLRRRNTL
LEQRTRREIQEAVSEQERRLQRQLEAAHRRQAGAEAVAAAAKA
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