prot_H-elongata_contig96625.17045.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig96625.17045.1
Unique Nameprot_H-elongata_contig96625.17045.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
BLAST of mRNA_H-elongata_contig96625.17045.1 vs. uniprot
Match: A0A6H5J9H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H5_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 3.140e-34
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 0
Query:    1 MADVESHIMPGITHWQHPRFFAWFPANSSPAAILGDLLASMFNVIGFSWEASPAATELETIVL 63
            MADVESHIMPGITHWQHPRFFAW+PA SSP AILGD+LASMFNVIGFSWEASPA+TELET+VL
Sbjct:  130 MADVESHIMPGITHWQHPRFFAWYPAASSPPAILGDMLASMFNVIGFSWEASPASTELETVVL 192          
BLAST of mRNA_H-elongata_contig96625.17045.1 vs. uniprot
Match: D8LUA2_ECTSI (Tyrosine Decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA2_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 3.710e-33
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 0
Query:    1 MADVESHIMPGITHWQHPRFFAWFPANSSPAAILGDLLASMFNVIGFSWEASPAATELETIVL 63
            MADVESHIMPGITHWQHPRFFAW+PA SSP AILGD+LASMFNVIGFSWEASPA+TELET+VL
Sbjct:  131 MADVESHIMPGITHWQHPRFFAWYPAASSPPAILGDMLASMFNVIGFSWEASPASTELETVVL 193          
BLAST of mRNA_H-elongata_contig96625.17045.1 vs. uniprot
Match: A0A7S1KDN4_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1KDN4_9ALVE)

HSP 1 Score: 99.0 bits (245), Expect = 5.580e-25
Identity = 41/63 (65.08%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 MADVESHIMPGITHWQHPRFFAWFPANSSPAAILGDLLASMFNVIGFSWEASPAATELETIVL 63
            M +V++ I+PG+THWQHPRFF +FPA+SS  A+LGD+L+  FN IGFSW A+PAATELET+V+
Sbjct:   56 MREVDTKILPGVTHWQHPRFFGYFPASSSFPAMLGDMLSMAFNTIGFSWAAAPAATELETVVM 118          
BLAST of mRNA_H-elongata_contig96625.17045.1 vs. uniprot
Match: A0A5A8CTM0_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CTM0_CAFRO)

HSP 1 Score: 104 bits (259), Expect = 1.310e-24
Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    1 MADVESHIMPGITHWQHPRFFAWFPANSSPAAILGDLLASMFNVIGFSWEASPAATELETIVL 63
            M DV  HI+PGITHWQHP FF++FPAN+S   +LGD+LAS FNVIGFSW ASPAATELE+I L
Sbjct:  111 MKDVREHILPGITHWQHPSFFSYFPANTSYPGLLGDMLASCFNVIGFSWIASPAATELESITL 173          
BLAST of mRNA_H-elongata_contig96625.17045.1 vs. uniprot
Match: A0A1B6F4A7_9HEMI (Uncharacterized protein (Fragment) n=3 Tax=Proconiini TaxID=565685 RepID=A0A1B6F4A7_9HEMI)

HSP 1 Score: 99.0 bits (245), Expect = 1.980e-24
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    1 MADVESHIMPGITHWQHPRFFAWFPANSSPAAILGDLLASMFNVIGFSWEASPAATELETIVLGDF 66
            MADVE+ IMPGITHWQHPRF A+FPA +S  +ILGD+L+ +   +GFSW ASPA TELETIVL  F
Sbjct:   41 MADVENKIMPGITHWQHPRFHAYFPAGNSYPSILGDMLSDIIACVGFSWAASPACTELETIVLDWF 106          
BLAST of mRNA_H-elongata_contig96625.17045.1 vs. uniprot
Match: A0A087SQR1_AUXPR (Tyrosine decarboxylase 1 n=4 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SQR1_AUXPR)

HSP 1 Score: 103 bits (257), Expect = 2.050e-24
Identity = 42/63 (66.67%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 MADVESHIMPGITHWQHPRFFAWFPANSSPAAILGDLLASMFNVIGFSWEASPAATELETIVL 63
            ++DV++HIMPGITHWQHP FF+W+PANSS  A+LGD+L+S   V+GF+W  SPAATELET+ L
Sbjct:   76 LSDVQTHIMPGITHWQHPSFFSWYPANSSYPALLGDMLSSALGVVGFAWIGSPAATELETVTL 138          
BLAST of mRNA_H-elongata_contig96625.17045.1 vs. uniprot
Match: A0A836HTB4_9TRYP (Uncharacterized protein n=2 Tax=Porcisia hertigi TaxID=2761500 RepID=A0A836HTB4_9TRYP)

HSP 1 Score: 103 bits (257), Expect = 2.430e-24
Identity = 43/61 (70.49%), Postives = 53/61 (86.89%), Query Frame = 0
Query:    3 DVESHIMPGITHWQHPRFFAWFPANSSPAAILGDLLASMFNVIGFSWEASPAATELETIVL 63
            D+++HI+PG+THWQHP FF+WFPA  SPAA+LGD++AS  N  GFSW ASPAATELETIV+
Sbjct:   77 DIQAHIIPGMTHWQHPNFFSWFPAQLSPAALLGDIIASGLNQPGFSWMASPAATELETIVM 137          
BLAST of mRNA_H-elongata_contig96625.17045.1 vs. uniprot
Match: A0A088RWY6_9TRYP (Tyrosine/dopa decarboxylase, putative n=4 Tax=Viannia TaxID=37616 RepID=A0A088RWY6_9TRYP)

HSP 1 Score: 102 bits (255), Expect = 4.100e-24
Identity = 43/61 (70.49%), Postives = 54/61 (88.52%), Query Frame = 0
Query:    3 DVESHIMPGITHWQHPRFFAWFPANSSPAAILGDLLASMFNVIGFSWEASPAATELETIVL 63
            D+++HI+PG+THWQHP F+AWFPA  SPAAILGDL+A+ FN  GF+W +SPAATELETIV+
Sbjct:   77 DIQAHIIPGMTHWQHPDFYAWFPAQVSPAAILGDLVANGFNQPGFNWMSSPAATELETIVM 137          
BLAST of mRNA_H-elongata_contig96625.17045.1 vs. uniprot
Match: A0A1B6EE69_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6EE69_9HEMI)

HSP 1 Score: 97.8 bits (242), Expect = 6.740e-24
Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 0
Query:    1 MADVESHIMPGITHWQHPRFFAWFPANSSPAAILGDLLASMFNVIGFSWEASPAATELETIVL 63
            MADVE+ IMPG+THWQHPRF A+FP+ +S  +ILGD+L  +   IGFSW ASPA TELETIVL
Sbjct:   34 MADVENKIMPGVTHWQHPRFHAYFPSGNSYPSILGDMLGDIIGCIGFSWAASPACTELETIVL 96          
BLAST of mRNA_H-elongata_contig96625.17045.1 vs. uniprot
Match: A0A367YRM5_9ACTN (Aspartate aminotransferase family protein n=2 Tax=Desertihabitans TaxID=2676837 RepID=A0A367YRM5_9ACTN)

HSP 1 Score: 100 bits (249), Expect = 2.740e-23
Identity = 42/65 (64.62%), Postives = 54/65 (83.08%), Query Frame = 0
Query:    1 MADVESHIMPGITHWQHPRFFAWFPANSSPAAILGDLLASMFNVIGFSWEASPAATELETIVLGD 65
            +AD+++H++PG+THWQHPRFFA+FPANSSP A+LGDLL+S   V G  W  SPAATELE +VL +
Sbjct:   64 LADLDTHLLPGLTHWQHPRFFAYFPANSSPPAVLGDLLSSGLGVQGMVWATSPAATELEQLVLDE 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96625.17045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9H5_9PHAE3.140e-3490.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LUA2_ECTSI3.710e-3390.48Tyrosine Decarboxylase n=1 Tax=Ectocarpus siliculo... [more]
A0A7S1KDN4_9ALVE5.580e-2565.08Hypothetical protein (Fragment) n=1 Tax=Vitrella b... [more]
A0A5A8CTM0_CAFRO1.310e-2473.02Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A1B6F4A7_9HEMI1.980e-2468.18Uncharacterized protein (Fragment) n=3 Tax=Proconi... [more]
A0A087SQR1_AUXPR2.050e-2466.67Tyrosine decarboxylase 1 n=4 Tax=Auxenochlorella p... [more]
A0A836HTB4_9TRYP2.430e-2470.49Uncharacterized protein n=2 Tax=Porcisia hertigi T... [more]
A0A088RWY6_9TRYP4.100e-2470.49Tyrosine/dopa decarboxylase, putative n=4 Tax=Vian... [more]
A0A1B6EE69_9HEMI6.740e-2468.25Uncharacterized protein (Fragment) n=1 Tax=Clastop... [more]
A0A367YRM5_9ACTN2.740e-2364.62Aspartate aminotransferase family protein n=2 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010977Aromatic-L-amino-acid decarboxylasePRINTSPR00800YHDCRBOXLASEcoord: 38..56
score: 55.19
coord: 17..36
score: 47.57
coord: 57..66
score: 21.29
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 44..63
e-value: 1.2E-22
score: 81.7
IPR002129Pyridoxal phosphate-dependent decarboxylasePFAMPF00282Pyridoxal_deCcoord: 2..63
e-value: 6.9E-18
score: 64.5
NoneNo IPR availableGENE3D3.90.1150.170coord: 1..43
e-value: 1.2E-22
score: 81.7
NoneNo IPR availablePANTHERPTHR11999:SF144MIP05841Pcoord: 1..63
NoneNo IPR availablePANTHERPTHR11999GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASEcoord: 1..63
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 2..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig96625contigH-elongata_contig96625:235..1371 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig96625.17045.1mRNA_H-elongata_contig96625.17045.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig96625 235..1374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig96625.17045.1 ID=prot_H-elongata_contig96625.17045.1|Name=mRNA_H-elongata_contig96625.17045.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
MADVESHIMPGITHWQHPRFFAWFPANSSPAAILGDLLASMFNVIGFSWE
ASPAATELETIVLGDF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010977Aromatic_deC
IPR015421PyrdxlP-dep_Trfase_major
IPR002129PyrdxlP-dep_de-COase
IPR015424PyrdxlP-dep_Trfase