prot_H-elongata_contig9659.17042.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9659.17042.1
Unique Nameprot_H-elongata_contig9659.17042.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length78
Homology
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BLAST of mRNA_H-elongata_contig9659.17042.1 vs. uniprot
Match: A0A6H5JEV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV9_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.420e-24
Identity = 49/72 (68.06%), Postives = 55/72 (76.39%), Query Frame = 0 
Query:    6 DHGGGDAMFVVAPYSREFGWSSSWTRPRPNRPVLGRLIALAKASAELIVEWLSREGMGMSGRNPASWKSAFR 77
            D GGG AM+VVAPY+R+ GW SSWT PRP RPVLGRL+ALAKASAE +V WLS  G G  G+ P  WK AFR
Sbjct: 1084 DPGGGSAMYVVAPYARDLGWESSWTSPRPERPVLGRLVALAKASAESLVGWLS--GEGALGKGPGGWKDAFR 1153
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BLAST of mRNA_H-elongata_contig9659.17042.1 vs. uniprot
Match: D7FGX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX0_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 9.210e-24
Identity = 48/73 (65.75%), Postives = 54/73 (73.97%), Query Frame = 0 
Query:    5 KDHGGGDAMFVVAPYSREFGWSSSWTRPRPNRPVLGRLIALAKASAELIVEWLSREGMGMSGRNPASWKSAFR 77
            +D  GG AM+VVAPY+R+ GW SSWT PRP RPVLGRL+ALAKASAE +V WLS  G G  G  P  WK AFR
Sbjct: 1018 RDAAGGSAMYVVAPYARDLGWESSWTSPRPERPVLGRLVALAKASAESLVGWLS--GEGTLGNGPGGWKDAFR 1088
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BLAST of mRNA_H-elongata_contig9659.17042.1 vs. uniprot
Match: A0A662XTA8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XTA8_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.720e-6
Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 0 
Query:   12 AMFVVAPYSREFGWSSSWTRPRPNRPVLGRLIALAKASAELIVEWLSREGMGMSGRNPASWKSAF 76
            AMF+   Y  E    SSWTR +P + V+ RL++LA+AS +L+V WL       SG + + WK+AF
Sbjct:  939 AMFIATDYE-EADCLSSWTRFKPEKVVVQRLVSLAQASYDLLVHWLD------SGTSASGWKAAF 996
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BLAST of mRNA_H-elongata_contig9659.17042.1 vs. uniprot
Match: A0A024FYK8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FYK8_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 1.780e-5
Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 0 
Query:   12 AMFVVAPYSREFGWSSSWTRPRPNRPVLGRLIALAKASAELIVEWLSREGMGMSGRNPASWKSAFR 77
            A+++ + Y  +    SSWTR RP R VL RL+++A  S E+++ W SR G  ++G     WK AFR
Sbjct:  926 ALYIASDYE-DMDCLSSWTRIRPERVVLQRLVSMAAQSYEIMLRWFSR-GCSLTG-----WKQAFR 984
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9659.17042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JEV9_9PHAE1.420e-2468.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGX0_ECTSI9.210e-2465.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A662XTA8_9STRA2.720e-643.08Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A024FYK8_9STRA1.780e-540.91Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035370Nrap protein, domain 5PFAMPF17406Nrap_D5coord: 10..60
e-value: 7.5E-6
score: 25.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9659contigH-elongata_contig9659:608..841 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9659.17042.1mRNA_H-elongata_contig9659.17042.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9659 608..841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9659.17042.1 ID=prot_H-elongata_contig9659.17042.1|Name=mRNA_H-elongata_contig9659.17042.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp
AFNQKDHGGGDAMFVVAPYSREFGWSSSWTRPRPNRPVLGRLIALAKASA
ELIVEWLSREGMGMSGRNPASWKSAFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035370Nrap_D5