prot_H-elongata_contig9592.16989.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9592.16989.1
Unique Nameprot_H-elongata_contig9592.16989.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
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BLAST of mRNA_H-elongata_contig9592.16989.1 vs. uniprot
Match: UPI0009047068 (uncharacterized protein LOC109239630 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI0009047068)

HSP 1 Score: 53.9 bits (128), Expect = 9.960e-7
Identity = 29/72 (40.28%), Postives = 43/72 (59.72%), Query Frame = 0 
Query:    1 FKRLVVELEKQLRVGNQHGFFQNIKSVQLEETKKVESQCVRDEKGTLLRDKGLVHERWMRFFHSLLNAKSDM 72
            F RL  ELE +   G     F+  K+  L++ K     C++DEKG +L +KG++ +RW  +FHSLLN + DM
Sbjct:  182 FGRLYEELEGR---GGDKRLFRLAKARDLDQVK-----CIKDEKGRVLSNKGIIRQRWQTYFHSLLNEEGDM 245
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9592.16989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00090470689.960e-740.28uncharacterized protein LOC109239630 n=1 Tax=Nicot... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9592contigH-elongata_contig9592:222..437 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9592.16989.1mRNA_H-elongata_contig9592.16989.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9592 222..437 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9592.16989.1 ID=prot_H-elongata_contig9592.16989.1|Name=mRNA_H-elongata_contig9592.16989.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
FKRLVVELEKQLRVGNQHGFFQNIKSVQLEETKKVESQCVRDEKGTLLRD
KGLVHERWMRFFHSLLNAKSDM
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