prot_H-elongata_contig95577.16962.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95577.16962.1
Unique Nameprot_H-elongata_contig95577.16962.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length167
Homology
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BLAST of mRNA_H-elongata_contig95577.16962.1 vs. uniprot
Match: A0A6H5KBH3_9PHAE (Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBH3_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 4.220e-36
Identity = 91/226 (40.27%), Postives = 109/226 (48.23%), Query Frame = 0 
Query:    1 LPELIPVEDRDKVHEIHHFSEQANWWVVPGRVMLGKYPGQIXXXXXXXXXXXXXXXX--DIVLRGKVTNLLSLQ--LPPQADEHRWSPPAEAEYGDDDGRFFKGFRAYRDDALAAVAE-----------------------------------------------------------GAEGGDARKGGRRELAFHHFPIPDLSPVENTALLGQLVEDLELLVMSDK 163
            LP L+P+ED D +++ HHF+E+ANW +VPG+V+LGKYPGQI                  DIVLRG VT+L  LQ  LPPQ DE +W PPA+    DD+G FF GFRAYR DA+AAV                                                             GA        G   LAFHHFPIPDLSP ENT +L  LV++LE LV S K
Sbjct:  100 LPNLVPIEDEDLIYKNHHFAERANW-LVPGKVLLGKYPGQIPADLTTGPTVQIARDRVLDIVLRGGVTDLYCLQAELPPQDDESQWGPPADK---DDNGMFFSGFRAYRGDAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEVVLGARGEEGLAFHHFPIPDLSPAENTEILAGLVDELEALVRSGK 321
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95577.16962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KBH3_9PHAE4.220e-3640.27Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95577contigH-elongata_contig95577:192..1658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95577.16962.1mRNA_H-elongata_contig95577.16962.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95577 192..1658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95577.16962.1 ID=prot_H-elongata_contig95577.16962.1|Name=mRNA_H-elongata_contig95577.16962.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp
LPELIPVEDRDKVHEIHHFSEQANWWVVPGRVMLGKYPGQIPADLPNDTQ
RVRDRIRDIVLRGKVTNLLSLQLPPQADEHRWSPPAEAEYGDDDGRFFKG
FRAYRDDALAAVAEGAEGGDARKGGRRELAFHHFPIPDLSPVENTALLGQ
LVEDLELLVMSDKARE*
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