prot_H-elongata_contig9540.16945.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9540.16945.1
Unique Nameprot_H-elongata_contig9540.16945.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length195
Homology
BLAST of mRNA_H-elongata_contig9540.16945.1 vs. uniprot
Match: D8LRM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM8_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 2.390e-102
Identity = 142/194 (73.20%), Postives = 164/194 (84.54%), Query Frame = 0
Query:    1 GVIEDHRQQHLLRGHDMEISSLAMSPSGSLIATGQCGSTRRKGYPSPVYLWNYATRTPLFVLEGLSKGVQHLSFSPDQRFLLGCGGDHLVYVWDTNSGELVTGKQYAESATLGEWTAVKRSGRRDVYHICLCIGSGIVVLEMNFDPARRQWTLSGGPMTTPSSGLRRRYHCSALHDGGKFLLCGTDVGDLVVFG 194
            G I D  QQHLLRGHDMEIS+L +S SG+LIATGQ GST+ KGYP+PV+LW+Y TRT LFV +GL++ V HLSFSPD RFLLGCGGD LVYVWDT++GELVTGKQYAE +TLGEWTAV  +GRR VY ICLC G+ ++ LE+ FDP+RRQW +SGGPM TPSSGLRR+Y CSAL  GG FLLCGTDVGD+VVFG
Sbjct:   44 GSISDPHQQHLLRGHDMEISALTVSSSGALIATGQRGSTKVKGYPAPVFLWDYKTRTSLFVYQGLTECVCHLSFSPDARFLLGCGGDGLVYVWDTSTGELVTGKQYAEPSTLGEWTAVNLAGRRPVYEICLCTGNDVLALELRFDPSRRQWAISGGPMATPSSGLRRQYKCSALLPGGGFLLCGTDVGDMVVFG 237          
BLAST of mRNA_H-elongata_contig9540.16945.1 vs. uniprot
Match: A0A7S2UWQ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWQ1_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.250e-54
Identity = 98/195 (50.26%), Postives = 129/195 (66.15%), Query Frame = 0
Query:    1 GVIEDHRQQHLLRGHDMEISSLAMSPSGSLIATGQCGSTRRKGYPSPVYLWNYATRTPLFVLEGLSKGVQHLSFSPDQRFLLGCGGDHLVYVWDTNSGELVTGKQYAESATLGEW-TAVKRSG-RRDVYHICLCIGSGIVVLEMNFDPARRQWTLSGGPMTTPSSGLRRRYHCSALHDGGKFLLCGTDVGDLVVF 193
            G + D  Q   LRGHDME+S+LA+SPSG+LIA+GQ G+T  KGY +PV +W  ATR  LF+LEG++  V  LSFSPD+ F+ G G D L+Y+W+   GE+V GK+YA   ++ +W +A   +G RR  Y + L I S + V  + FDP+RRQW L   PM  P SGL R Y  SAL +  +F +CGT VGDL VF
Sbjct:   66 GDLADPHQSSYLRGHDMEVSTLAISPSGNLIASGQMGTTHHKGYYAPVMIWEMATRRQLFILEGITGRVNSLSFSPDEAFVCGYGQDGLLYIWELQGGEVVFGKRYAAPVSIFQWCSAYNEAGNRRPKYQVILIIQSEVKVGTLAFDPSRRQWNLDLEPMNMPGSGLVRDYLVSALTEDRQFCMCGTAVGDLAVF 260          
BLAST of mRNA_H-elongata_contig9540.16945.1 vs. uniprot
Match: A0A7S2BHX7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHX7_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.630e-53
Identity = 86/193 (44.56%), Postives = 128/193 (66.32%), Query Frame = 0
Query:    1 GVIEDHRQQHLLRGHDMEISSLAMSPSGSLIATGQCGSTRRKGYPSPVYLWNYATRTPLFVLEGLSKGVQHLSFSPDQRFLLGCGGDHLVYVWDTNSGELVTGKQYAESATLGEWTAVKRSGRRDVYHICLCIGSGIVVLEMNFDPARRQWTLSGGPMTTPSSGLRRRYHCSALHDGGKFLLCGTDVGDLVVF 193
            G + D   Q  LRGHDME+++LA+S +G+ IA+GQ G+T RKG+ +PV +W++ TR PL  L+G ++ V  L FSPD++FL  CG D L+ +WD  +GEL+ GK++ +   + +W  V + GRR+VY I +   + + + ++ FDPAR+QW L G  M  P++G+ R Y CS+    G  LL GT VGDL+VF
Sbjct:  143 GDLNDPHNQEFLRGHDMEVTALAVSATGAFIASGQAGTTHRKGFGAPVIVWDFETRRPLLTLQGHTEKVNILRFSPDEKFLAACGQDLLLQIWDLQTGELILGKKFKQVVAMFQWCDVNQKGRRNVYDIAIGSSNNVALDQLYFDPARQQWILDGTSMAMPTAGMTRDYLCSSRSADGDELLAGTSVGDLLVF 335          
BLAST of mRNA_H-elongata_contig9540.16945.1 vs. uniprot
Match: A0A835ZHC1_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHC1_9STRA)

HSP 1 Score: 186 bits (472), Expect = 7.570e-52
Identity = 95/203 (46.80%), Postives = 126/203 (62.07%), Query Frame = 0
Query:    2 VIEDHRQQHLLRGHDMEISSLAMSPSGSLIATGQCGSTRRKGYPSPVYLWNYATRTPLFV-LEGLSKGVQHLSFSPDQRFLLGCGGDHLVYVWDTNSGELVTGKQY-----AESATLGEWTAVKRSGRRDVYHICLCIGSGIVVLEMNFDPARRQWTLSGGPMTTPSSGLRRRYHCSALHD-----GGKFLLCGTDVGDLVVF 193
            ++ D  +Q LLRGHD EIS+LA SPSG LIATGQ GSTR KG PSPV +W Y + T   + L GL++GV  L+FSPD +FL G   D ++Y+WD  +GE+   + Y     A +    +W  V    RR  Y   LC+G+ +V  +  FD ARRQW +   PM  P++GL+R Y CSA+       G  +LLCGT+VGDLVV+
Sbjct:   84 LVSDPHRQELLRGHDEEISALASSPSGDLIATGQAGSTRAKGSPSPVIVWAYGSPTKARLKLAGLTQGVTLLAFSPDAQFLAGSANDGMLYIWDAATGEVAFCRPYVRRDGASALRFFQWCGVDAGARRRAYRALLCLGADVVAADFAFDAARRQWDVRTAPMAVPATGLQRTYLCSAVTTPETAAGASYLLCGTEVGDLVVY 286          
BLAST of mRNA_H-elongata_contig9540.16945.1 vs. uniprot
Match: A0A7S2SRF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRF7_9STRA)

HSP 1 Score: 179 bits (453), Expect = 3.170e-49
Identity = 85/193 (44.04%), Postives = 123/193 (63.73%), Query Frame = 0
Query:    1 GVIEDHRQQHLLRGHDMEISSLAMSPSGSLIATGQCGSTRRKGYPSPVYLWNYATRTPLFVLEGLSKGVQHLSFSPDQRFLLGCGGDHLVYVWDTNSGELVTGKQYAESATLGEWTAVKRSGRRDVYHICLCIGSGIVVLEMNFDPARRQWTLSGGPMTTPSSGLRRRYHCSALHDGGKFLLCGTDVGDLVVF 193
            G + D  QQ  LRGHDMEI+ LA+S +GSL+A+GQ G+   KGY +PV +W+  T+  +F L G ++GV  L FSPD++FL GCG D +V++WD  +GE+V GK+ A+  +L  W  +   GRR  Y + L       + E+ FDP+R+QW L    ++ P++G+ R Y CSA    G  LL G+ VGD++VF
Sbjct:   89 GDVNDPHQQEFLRGHDMEITCLAISGTGSLLASGQLGTVHHKGYGAPVIVWDLNTKRAVFTLHGHTEGVDLLRFSPDEKFLCGCGRDCVVHIWDMQTGEVVYGKKLAKPVSLFHWCDMHARGRRTSYDLALSTAQETTMNELFFDPSRQQWMLEPKQLSLPTAGMVREYCCSARSADGDELLAGSTVGDMLVF 281          
BLAST of mRNA_H-elongata_contig9540.16945.1 vs. uniprot
Match: F0YSJ0_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YSJ0_AURAN)

HSP 1 Score: 165 bits (417), Expect = 1.100e-46
Identity = 88/202 (43.56%), Postives = 122/202 (60.40%), Query Frame = 0
Query:    1 GVIEDHRQQHLLRGHDMEISSLAMSPSGSLIATGQCGSTRRKGYPSPVYLWNYATRTPLFVLEGLSKGVQHLSFSPDQRFLLGCGGDHLVYVWDTNSGELVTGKQYAESATLGEWTAVKRSGRRDVYHICLCIGSGIVVLE---MNFDPARRQWTLSGGPMTTPSSGLRRRYHCSALH-----DGG---KFLLCGTDVGDLV 191
            G ++D   Q LLR HD  IS+LA S  GSL+A+GQ GST   G+ +PV +W+  +   LF L G+++ V  L FS D RFL  CG D ++YVWD  SGE+V GK+YA+  +L +W      GRR VY +   + +G+  +E   + FD  R+QW L+  P+  P++G+ R Y CSAL      DGG   K+LL GT  GDL+
Sbjct:   95 GDLDDPHAQKLLRAHDEPISALATSVDGSLLASGQVGSTHIPGFAAPVVVWDRVSERALFKLRGITQRVNILEFSDDMRFLAACGEDCVLYVWDATSGEVVFGKRYAKRLSLFQWIGAMDRGRRRVYRLATAV-TGVAEVEHGELCFDATRQQWQLASAPVVMPAAGMAREYKCSALATYPSPDGGEPEKYLLAGTMEGDLL 295          
BLAST of mRNA_H-elongata_contig9540.16945.1 vs. uniprot
Match: A0A7S1XWX6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWX6_9STRA)

HSP 1 Score: 167 bits (423), Expect = 8.240e-46
Identity = 80/193 (41.45%), Postives = 118/193 (61.14%), Query Frame = 0
Query:    1 GVIEDHRQQHLLRGHDMEISSLAMSPSGSLIATGQCGSTRRKGYPSPVYLWNYATRTPLFVLEGLSKGVQHLSFSPDQRFLLGCGGDHLVYVWDTNSGELVTGKQYAESATLGEWTAVKRSGRRDVYHICLCIGSGIVVLEMNFDPARRQWTLSGGPMTTPSSGLRRRYHCSALHDGGKFLLCGTDVGDLVVF 193
            G + D   Q  LRGHDM +++LA+SP+G+LIA+GQ GS   KG+ +PV +W+Y TR+PLF L G ++ V ++ FSPD+RFL   G D L+YVWD  +GE+V  K++    ++  WTAV    RR  Y    C+   +      FDP RRQW L G  +  P+    R YH +A+    +++L G+ +G++ VF
Sbjct:   59 GSLSDPHAQVCLRGHDMPVTALAISPTGALIASGQEGSIHHKGFHAPVVIWDYETRSPLFTLLGHTRRVANVRFSPDERFLCATGEDSLLYVWDVGTGEVVFAKRFNSPVSIFRWTAVVDGPRRPHYMASYCVKQEVFAATFAFDPVRRQWNLDGQLVACPNKA-ERTYHDAAVTMDARYMLAGSALGEMAVF 250          
BLAST of mRNA_H-elongata_contig9540.16945.1 vs. uniprot
Match: A0A7S1UCE0_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCE0_9STRA)

HSP 1 Score: 167 bits (423), Expect = 4.960e-45
Identity = 80/193 (41.45%), Postives = 118/193 (61.14%), Query Frame = 0
Query:    1 GVIEDHRQQHLLRGHDMEISSLAMSPSGSLIATGQCGSTRRKGYPSPVYLWNYATRTPLFVLEGLSKGVQHLSFSPDQRFLLGCGGDHLVYVWDTNSGELVTGKQYAESATLGEWTAVKRSGRRDVYHICLCIGSGIVVLEMNFDPARRQWTLSGGPMTTPSSGLRRRYHCSALHDGGKFLLCGTDVGDLVVF 193
            G + D   Q  LRGHDM +++LA+SP+G+LIA+GQ GS   KG+ +PV +W+Y TR+PLF L G ++ V ++ FSPD+RFL   G D L+YVWD  +GE+V  K++    ++  WTAV    RR  Y    C+   +      FDP RRQW L G  +  P+    R YH +A+    +++L G+ +G++ VF
Sbjct:   59 GSLSDPHAQVCLRGHDMPVTALAISPTGALIASGQEGSIHHKGFHAPVVIWDYETRSPLFTLLGHTRRVANVRFSPDERFLCATGEDSLLYVWDVGTGEVVFAKRFNSPVSIFRWTAVVDGPRRPHYMASYCVKQEVFAATFAFDPVRRQWNLDGQLVACPNKA-ERTYHDAAVTMDARYMLAGSALGEMAVF 250          
BLAST of mRNA_H-elongata_contig9540.16945.1 vs. uniprot
Match: A0A7S3ZQS9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQS9_9STRA)

HSP 1 Score: 159 bits (403), Expect = 4.330e-42
Identity = 87/204 (42.65%), Postives = 121/204 (59.31%), Query Frame = 0
Query:    1 GVIEDHRQQHLLRGHDMEISSLAMSPSGSLIATGQCGSTRRKGYPSPVYLWNYATRTPLFVLEGLSKGVQHLSFSPDQRFLLGCGGDHLVYVWDTNSGELVTGKQYAESATLGEWTAVKRSGRRDVYHICLCIGSGIVVL---EMNFDPARRQWTLSGGPMTTPSSGLRRRYHCSAL---------HDGGKFLLCGTDVGDLVV 192
            G + D  +Q LLR HD  IS+LA S  GSL+A+GQ GSTR  GY + V +W+  T+T  F L GL++ V  L FS D RFL   G D ++Y+WDT SGE+V GK+Y +  +L +W   +  GRR VY +   +  GI  +   E++FD  R+QW L+  P+  P++G+ R Y CS L          +  K+LL GT  GDL+V
Sbjct:   73 GDLTDPHKQKLLRAHDEPISALATSRDGSLLASGQLGSTRVPGYAALVVIWDTLTQTVAFRLRGLTQRVVILEFSDDMRFLAAAGEDCVLYIWDTASGEVVFGKRYIKQLSLFQWVGARDCGRRRVYRLATAM-RGIAEVYHGELSFDATRQQWQLATVPVVMPAAGMARNYRCSTLATYAAEAPEEEPAKYLLAGTMEGDLLV 275          
BLAST of mRNA_H-elongata_contig9540.16945.1 vs. uniprot
Match: A0A067D1B9_SAPPC (ANAPC4_WD40 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D1B9_SAPPC)

HSP 1 Score: 138 bits (348), Expect = 1.180e-34
Identity = 71/191 (37.17%), Postives = 103/191 (53.93%), Query Frame = 0
Query:    3 IEDHRQQHLLRGHDMEISSLAMSPSGSLIATGQCGSTRRKGYPSPVYLWNYATRTPLFVLEGLSKGVQHLSFSPDQRFLLGCGGDHLVYVWDTNSGELVTGKQYAESATLGEWTAVKRSGRRDVYHICLCIGSGIVVLEMNFDPARRQWTLSGGPMTTPSSGLRRRYHCSALHDGGKFLLCGTDVGDLVVF 193
            + D   Q  LRGHD EISSL +S SG L+A+GQ  ST+R G  + + +W+   ++ L+ L G    +  L+FSPD  FLLG G D  V +WD  + E+V  + Y    T+  W  V+   RR  Y +     S ++V E+++D    Q+ L   P   PS+G+ R Y  + +      LL GT  G+LVVF
Sbjct:   48 VSDTHAQEFLRGHDEEISSLCVSRSGVLLASGQLPSTKRNGAGAAIVVWDLYAKSELYQLHGFFCKITKLAFSPDDHFLLGAGADGSVILWDLRTSEVVVTRSYGSPVTILNWGKVEEKTRRPKYTLLFAHSSQLLVSELSYDIGSMQYKLESYPCAMPSTGMVREYLAACMTQTNDTLLAGTYAGELVVF 238          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9540.16945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM8_ECTSI2.390e-10273.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UWQ1_9STRA1.250e-5450.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2BHX7_9STRA2.630e-5344.56Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835ZHC1_9STRA7.570e-5246.80Quinon protein alcohol dehydrogenase-like superfam... [more]
A0A7S2SRF7_9STRA3.170e-4944.04Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0YSJ0_AURAN1.100e-4643.56Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S1XWX6_9STRA8.240e-4641.45Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1UCE0_9STRA4.960e-4541.45Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A7S3ZQS9_9STRA4.330e-4242.65Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A067D1B9_SAPPC1.180e-3437.17ANAPC4_WD40 domain-containing protein n=2 Tax=Sapr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 5..52
e-value: 0.03
score: 23.5
coord: 55..94
e-value: 4.0E-6
score: 36.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 8..34
e-value: 0.026
score: 15.4
coord: 58..94
e-value: 7.4E-5
score: 23.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 62..103
score: 11.945
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..194
e-value: 1.3E-25
score: 92.1
NoneNo IPR availablePANTHERPTHR13720:SF46coord: 3..193
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 3..193
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 81..95
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 12..103
score: 12.341
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9540contigH-elongata_contig9540:2512..4128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9540.16945.1mRNA_H-elongata_contig9540.16945.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9540 2512..4128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9540.16945.1 ID=prot_H-elongata_contig9540.16945.1|Name=mRNA_H-elongata_contig9540.16945.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp
GVIEDHRQQHLLRGHDMEISSLAMSPSGSLIATGQCGSTRRKGYPSPVYL
WNYATRTPLFVLEGLSKGVQHLSFSPDQRFLLGCGGDHLVYVWDTNSGEL
VTGKQYAESATLGEWTAVKRSGRRDVYHICLCIGSGIVVLEMNFDPARRQ
WTLSGGPMTTPSSGLRRRYHCSALHDGGKFLLCGTDVGDLVVFG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf