prot_H-elongata_contig95229.16930.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95229.16930.1
Unique Nameprot_H-elongata_contig95229.16930.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
BLAST of mRNA_H-elongata_contig95229.16930.1 vs. uniprot
Match: D7G5K8_ECTSI (Scaper protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K8_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 6.110e-27
Identity = 57/73 (78.08%), Postives = 61/73 (83.56%), Query Frame = 0
Query:    2 SPLKGSSSNMAS-KGTSGLRGRSGGDSTAHGFNQRLWGYLFRNVNRAVDELYYLCEAECSATHCTEAAELLEG 73
            SP KGS+ +++S K     RG SG DSTA GFNQRLWGYLFRNVNRAVDELYYLCEAE SATHCTEAAELLEG
Sbjct:    3 SPFKGSNGSLSSSKRAPSCRGNSGSDSTAQGFNQRLWGYLFRNVNRAVDELYYLCEAEGSATHCTEAAELLEG 75          
BLAST of mRNA_H-elongata_contig95229.16930.1 vs. uniprot
Match: A0A7S2WB00_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB00_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 7.880e-14
Identity = 34/43 (79.07%), Postives = 35/43 (81.40%), Query Frame = 0
Query:   31 GFNQRLWGYLFRNVNRAVDELYYLCEAECSATHCTEAAELLEG 73
            G  QRLW YLFRNVNRAVDELYYLCEAE S  HC EAA+LLE 
Sbjct:  102 GSQQRLWSYLFRNVNRAVDELYYLCEAEGSTEHCEEAAKLLES 144          
BLAST of mRNA_H-elongata_contig95229.16930.1 vs. uniprot
Match: A0A1W0A180_9STRA (Farnesyl pyrophosphate synthetase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A180_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.280e-9
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0
Query:   32 FNQRLWGYLFRNVNRAVDELYYLCEAECSATHCTEAAELLEG 73
            F +RLW YLFRNV+RAVDELY +CE E   T C EAA +L+G
Sbjct:   15 FKERLWEYLFRNVHRAVDELYCMCELESLPTRCEEAARVLQG 56          
BLAST of mRNA_H-elongata_contig95229.16930.1 vs. uniprot
Match: A0A2Z7AJ01_9LAMI (SCAPER_N domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AJ01_9LAMI)

HSP 1 Score: 57.4 bits (137), Expect = 2.140e-8
Identity = 24/41 (58.54%), Postives = 30/41 (73.17%), Query Frame = 0
Query:   32 FNQRLWGYLFRNVNRAVDELYYLCEAECSATHCTEAAELLE 72
            F +RLWG+LF N+NRAVDELY LCE EC      EA+ +L+
Sbjct:   74 FRERLWGFLFENLNRAVDELYLLCELECDLDQMKEASLVLD 114          
BLAST of mRNA_H-elongata_contig95229.16930.1 vs. uniprot
Match: A0A485L4P2_9STRA (Aste57867_15680 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4P2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.890e-8
Identity = 26/40 (65.00%), Postives = 28/40 (70.00%), Query Frame = 0
Query:   32 FNQRLWGYLFRNVNRAVDELYYLCEAECSATHCTEAAELL 71
            F  RLW YLFRNVN AVDELY +CE E S   C EAA +L
Sbjct:   68 FKMRLWDYLFRNVNSAVDELYCMCELESSTPRCEEAARVL 107          
BLAST of mRNA_H-elongata_contig95229.16930.1 vs. uniprot
Match: A0A1Y1HSX8_KLENI (SCAPER_N domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSX8_KLENI)

HSP 1 Score: 58.5 bits (140), Expect = 2.950e-8
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   24 GGDSTAHG-FNQRLWGYLFRNVNRAVDELYYLCEAECSATHCTEAAELL 71
            GG++   G F +RLW YLF N+ R++DELY+LCE EC   H  EA ++L
Sbjct: 1354 GGENADRGVFKERLWSYLFDNLGRSIDELYFLCELECDEAHMREAMQVL 1402          
BLAST of mRNA_H-elongata_contig95229.16930.1 vs. uniprot
Match: A0A2Z7AIQ2_9LAMI (SCAPER_N domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AIQ2_9LAMI)

HSP 1 Score: 57.4 bits (137), Expect = 7.460e-8
Identity = 24/41 (58.54%), Postives = 30/41 (73.17%), Query Frame = 0
Query:   32 FNQRLWGYLFRNVNRAVDELYYLCEAECSATHCTEAAELLE 72
            F +RLWG+LF N+NRAVDELY LCE EC      EA+ +L+
Sbjct:   74 FRERLWGFLFENLNRAVDELYLLCELECDLDQMKEASLVLD 114          
BLAST of mRNA_H-elongata_contig95229.16930.1 vs. uniprot
Match: A0A5A7Q883_STRAF (S phase cyclin A-associated protein in theendoplasmic reticulum n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7Q883_STRAF)

HSP 1 Score: 57.4 bits (137), Expect = 7.480e-8
Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 0
Query:   32 FNQRLWGYLFRNVNRAVDELYYLCEAECSATHCTEAAELLE 72
            F +RLWG+LF N+NRAVDELY LCE EC      EA  +LE
Sbjct:  337 FRERLWGFLFENLNRAVDELYLLCELECDLDQMKEANLVLE 377          
BLAST of mRNA_H-elongata_contig95229.16930.1 vs. uniprot
Match: A0A8J5HM40_ZINOF (SCAPER_N domain-containing protein n=7 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5HM40_ZINOF)

HSP 1 Score: 57.4 bits (137), Expect = 7.480e-8
Identity = 26/41 (63.41%), Postives = 29/41 (70.73%), Query Frame = 0
Query:   32 FNQRLWGYLFRNVNRAVDELYYLCEAECSATHCTEAAELLE 72
            F QRLW +LF N+NRAVDELY LCE EC      EAA +LE
Sbjct:  375 FRQRLWCFLFENLNRAVDELYLLCELECDMEQMDEAALVLE 415          
BLAST of mRNA_H-elongata_contig95229.16930.1 vs. uniprot
Match: A0A498I0V2_MALDO (SCAPER_N domain-containing protein n=5 Tax=Maleae TaxID=721813 RepID=A0A498I0V2_MALDO)

HSP 1 Score: 56.6 bits (135), Expect = 1.400e-7
Identity = 26/47 (55.32%), Postives = 30/47 (63.83%), Query Frame = 0
Query:   26 DSTAHGFNQRLWGYLFRNVNRAVDELYYLCEAECSATHCTEAAELLE 72
            D +   F QRLW +LF N+NRAVDELY LCE EC      EA  +LE
Sbjct:  359 DESKERFRQRLWCFLFENLNRAVDELYLLCELECDVEQMKEAILVLE 405          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95229.16930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5K8_ECTSI6.110e-2778.08Scaper protein n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A7S2WB00_9STRA7.880e-1479.07Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1W0A180_9STRA1.280e-964.29Farnesyl pyrophosphate synthetase n=1 Tax=Thrausto... [more]
A0A2Z7AJ01_9LAMI2.140e-858.54SCAPER_N domain-containing protein n=1 Tax=Dorcoce... [more]
A0A485L4P2_9STRA2.890e-865.00Aste57867_15680 protein n=1 Tax=Aphanomyces stella... [more]
A0A1Y1HSX8_KLENI2.950e-851.02SCAPER_N domain-containing protein n=1 Tax=Klebsor... [more]
A0A2Z7AIQ2_9LAMI7.460e-858.54SCAPER_N domain-containing protein n=1 Tax=Dorcoce... [more]
A0A5A7Q883_STRAF7.480e-860.98S phase cyclin A-associated protein in theendoplas... [more]
A0A8J5HM40_ZINOF7.480e-863.41SCAPER_N domain-containing protein n=7 Tax=Zingibe... [more]
A0A498I0V2_MALDO1.400e-755.32SCAPER_N domain-containing protein n=5 Tax=Maleae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032446S phase cyclin A-associated protein in the endoplasmic reticulum, N-terminalPFAMPF16501SCAPER_Ncoord: 29..71
e-value: 4.3E-10
score: 39.5
NoneNo IPR availablePANTHERPTHR31434FAMILY NOT NAMEDcoord: 27..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95229contigH-elongata_contig95229:710..1341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95229.16930.1mRNA_H-elongata_contig95229.16930.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95229 710..1361 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95229.16930.1 ID=prot_H-elongata_contig95229.16930.1|Name=mRNA_H-elongata_contig95229.16930.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
MSPLKGSSSNMASKGTSGLRGRSGGDSTAHGFNQRLWGYLFRNVNRAVDE
LYYLCEAECSATHCTEAAELLEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032446SCAPER_N