prot_H-elongata_contig94996.16910.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig94996.16910.1
Unique Name	prot_H-elongata_contig94996.16910.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	113

Homology

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BLAST of mRNA_H-elongata_contig94996.16910.1 vs. uniprot
Match: D7FHI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI1_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 7.540e-60
Identity = 92/113 (81.42%), Postives = 101/113 (89.38%), Query Frame = 0

Query:    1 QILDVETGRLLARLWDARY-PLYPRPNVAFNATDELVVTDGALWDPRRGARVHQFDKLGSGCGHGLFHPNGNEVLVDEGVWDLRTHRLLRTLLCQEGALMKPSPGGEVLYTYR 112
            Q+LDVETG +LARLWDAR  PLYP PNV FNATD+LVVTDGALWDPRRG RV+QFDKLG G G GLFHPNGNEV+VDEGVWDLRTHRLLRTL CQ+G +MKP PGG+VLYTY+
Sbjct:  159 QVLDVETGSVLARLWDARSRPLYPLPNVGFNATDDLVVTDGALWDPRRGLRVYQFDKLGGGGGFGLFHPNGNEVVVDEGVWDLRTHRLLRTLPCQDGTVMKPDPGGDVLYTYK 271

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BLAST of mRNA_H-elongata_contig94996.16910.1 vs. uniprot
Match: A0A6H5JDL7_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL7_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 4.100e-57
Identity = 91/113 (80.53%), Postives = 101/113 (89.38%), Query Frame = 0

Query:    1 QILDVETGRLLARLWDARY-PLYPRPNVAFNATDELVVTDGALWDPRRGARVHQFDKLGSGCGHGLFHPNGNEVLVDEGVWDLRTHRLLRTLLCQEGALMKPSPGGEVLYTYR 112
            Q+LDVETG +LARLWDAR  PLYP PN+ FNATD+LVVTDGALWDPRRG RV+QFDKLG G G GLFHPNGNEV+VDEGVWDLRTHRLLRTL CQ+G +MKP PGG+VLYTY+
Sbjct: 2056 QVLDVETGSVLARLWDARSRPLYPLPNIGFNATDDLVVTDGALWDPRRGLRVYQFDKLGGGGGFGLFHPNGNEVVVDEGVWDLRTHRLLRTLPCQDGTVMKPDPGGDVLYTYK 2168

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BLAST of mRNA_H-elongata_contig94996.16910.1 vs. uniprot
Match: J9K6N6_ACYPI (LisH domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9K6N6_ACYPI)

HSP 1 Score: 98.2 bits (243), Expect = 1.570e-21
Identity = 47/110 (42.73%), Postives = 70/110 (63.64%), Query Frame = 0

Query:    2 ILDVETGRLLARLWDARYPLYPRPNVAFNATDELVVTDGALWDPRRGARVHQFDKLGSGCGHGLFHPNGNEVLVDEGVWDLRTHRLLRTLLCQEGALMKPSPGGEVLYTY 111
            I D+E+ + + +L      LY R   AF+AT+ELV++DG LWD   G  +H+FDKL   C  G+FHPNG E++ ++ VWD+RT +LLRT+   +   +K S  G+ +Y Y
Sbjct: 1125 IYDLESRKSILKLIPKHSNLYSRNRAAFDATNELVLSDGVLWDAIAGKEIHKFDKLNE-CVSGIFHPNGLEIISNKEVWDMRTFQLLRTVPSLDQCNVKFSKSGDGMYLY 1233

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BLAST of mRNA_H-elongata_contig94996.16910.1 vs. uniprot
Match: A0A3M6VCW5_9STRA (LisH domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCW5_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.020e-20
Identity = 53/113 (46.90%), Postives = 70/113 (61.95%), Query Frame = 0

Query:    2 ILDVETGRLLARLWDA-RYPLYP-RPNVAFNATDELVVTDGALWDPRRGAR-VHQFDKLGSGCGHGLFHPNGNEVLVDEGVWDLRTHRLLRTLLCQEGALMKPSPGGEVLYTY 111
            +LD+ TG +L  L DA R   Y    N  F+  D  ++TDG LWD R   R +++FDKL S  G G FHPNGNEV+V+  VWDLRT+RLLR +   +   +K +P G VL+ Y
Sbjct: 1360 VLDIATGNVLCNLQDAMRSNGYGVETNCCFSPCDGTILTDGMLWDARIPTRGLYKFDKL-SNVGCGFFHPNGNEVIVNSAVWDLRTYRLLRMVPALDKCSIKFNPSGSVLFAY 1471

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BLAST of mRNA_H-elongata_contig94996.16910.1 vs. uniprot
Match: A0A662Y0Y0_9STRA (LisH domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0Y0_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.030e-20
Identity = 53/113 (46.90%), Postives = 71/113 (62.83%), Query Frame = 0

Query:    2 ILDVETGRLLARLWDA-RYPLY-PRPNVAFNATDELVVTDGALWDPRRGAR-VHQFDKLGSGCGHGLFHPNGNEVLVDEGVWDLRTHRLLRTLLCQEGALMKPSPGGEVLYTY 111
            +LD+ TG +L  L D+ R   Y    N  F+  D  ++TDG LWD R   R +++FDKL S  G+G FHPNGNEV+V+  VWDLRT+RLLR +   +   +K SP G VL+ Y
Sbjct: 1371 MLDIATGDVLCDLKDSMRSNDYGTETNCCFSPCDGTILTDGMLWDARIPTRALYKFDKL-SNVGYGFFHPNGNEVIVNSAVWDLRTYRLLRMVPAMDKCNIKFSPSGSVLFAY 1482

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BLAST of mRNA_H-elongata_contig94996.16910.1 vs. uniprot
Match: A0A0D2WKX1_CAPO3 (LisH domain-containing protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WKX1_CAPO3)

HSP 1 Score: 95.9 bits (237), Expect = 1.030e-20
Identity = 46/109 (42.20%), Postives = 68/109 (62.39%), Query Frame = 0

Query:    1 QILDVETGRLLARLWDARYPLYPRPNVAFNATDELVVTDGALWDPRRGARVHQFDKLGSGCGHGLFHPNGNEVLVDEGVWDLRTHRLLRTLLCQEGALMKPSPGGEVLY 109
            +I   ETG+++  L DA    Y R    FNATD+LV+ DG LWD R+  ++H+FDK  +  G   FHPNGNE+L++  +WD+RT +LLRT    + A +  S   +V++
Sbjct: 1577 RIYSAETGQVILTLSDAASNRYERNVACFNATDDLVLHDGVLWDARQARKIHKFDKFNN-YGLSRFHPNGNEILINSEIWDVRTFKLLRTCPMLDRASVIFSSTSDVIF 1684

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BLAST of mRNA_H-elongata_contig94996.16910.1 vs. uniprot
Match: J9JR27_ACYPI (LisH domain-containing protein n=17 Tax=Aphidinae TaxID=133076 RepID=J9JR27_ACYPI)

HSP 1 Score: 95.5 bits (236), Expect = 1.390e-20
Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = 0

Query:    2 ILDVETGRLLARLWDARYPLYPRPNVAFNATDELVVTDGALWDPRRGARVHQFDKLGSGCGHGLFHPNGNEVLVDEGVWDLRTHRLLRTLLCQEGALMKPSPGGEVLYTY 111
            I D+ET + +  L       Y R   AF+AT+ELV++DG LWD   G  +H+FDKL   C  G+FHPNG E++ +  VWD+RT +LLRT+   +   +  S  GE +Y Y
Sbjct: 1130 IYDLETSKRILTLVPKHSNQYSRNRAAFDATNELVLSDGVLWDAIAGKEIHKFDKLNQ-CVSGIFHPNGLEIISNTEVWDMRTFQLLRTVSSLDQCNVTFSKSGEGMYLY 1238

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BLAST of mRNA_H-elongata_contig94996.16910.1 vs. uniprot
Match: A0A6A4G491_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4G491_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.670e-20
Identity = 53/113 (46.90%), Postives = 70/113 (61.95%), Query Frame = 0

Query:    2 ILDVETGRLLARLWDA-RYPLY-PRPNVAFNATDELVVTDGALWDPRRGAR-VHQFDKLGSGCGHGLFHPNGNEVLVDEGVWDLRTHRLLRTLLCQEGALMKPSPGGEVLYTY 111
            +LD+ TG +L  L DA R   Y    N  F+  D  ++TDG LWD R   R +++FDKL S  G G FHPNGNEV+V+  VWDLRT+RLLR +   +   +K +P G VL+ Y
Sbjct:  124 VLDIATGDVLCDLKDAMRSNDYGAETNCCFSPCDGTILTDGMLWDARIPTRALYKFDKL-SNVGCGFFHPNGNEVIVNSAVWDLRTYRLLRMVPALDKCTIKFNPSGSVLFAY 235

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BLAST of mRNA_H-elongata_contig94996.16910.1 vs. uniprot
Match: A0A6A3F5T6_9STRA (LisH domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3F5T6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.550e-20
Identity = 53/113 (46.90%), Postives = 70/113 (61.95%), Query Frame = 0

Query:    2 ILDVETGRLLARLWDA-RYPLY-PRPNVAFNATDELVVTDGALWDPRRGAR-VHQFDKLGSGCGHGLFHPNGNEVLVDEGVWDLRTHRLLRTLLCQEGALMKPSPGGEVLYTY 111
            +LD+ TG +L  L DA R   Y    N  F+  D  ++TDG LWD R   R +++FDKL S  G G FHPNGNEV+V+  VWDLRT+RLLR +   +   +K +P G VL+ Y
Sbjct:  702 VLDIATGDVLCDLKDAMRSNDYGAETNCCFSPCDGTILTDGMLWDARIPTRALYKFDKL-SNVGCGFFHPNGNEVIVNSAVWDLRTYRLLRMVPALDKCTIKFNPSGSVLFAY 813

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BLAST of mRNA_H-elongata_contig94996.16910.1 vs. uniprot
Match: A0A6A3N5G8_9STRA (LisH domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3N5G8_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.590e-20
Identity = 53/113 (46.90%), Postives = 70/113 (61.95%), Query Frame = 0

Query:    2 ILDVETGRLLARLWDA-RYPLY-PRPNVAFNATDELVVTDGALWDPRRGAR-VHQFDKLGSGCGHGLFHPNGNEVLVDEGVWDLRTHRLLRTLLCQEGALMKPSPGGEVLYTY 111
            +LD+ TG +L  L DA R   Y    N  F+  D  ++TDG LWD R   R +++FDKL S  G G FHPNGNEV+V+  VWDLRT+RLLR +   +   +K +P G VL+ Y
Sbjct: 1073 VLDIATGDVLCDLKDAMRSNDYGAETNCCFSPCDGTILTDGMLWDARIPTRALYKFDKL-SNVGCGFFHPNGNEVIVNSAVWDLRTYRLLRMVPALDKCTIKFNPSGSVLFAY 1184

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig94996.16910.1 vs. uniprot

BLAST of mRNA_H-elongata_contig94996.16910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FHI1_ECTSI	7.540e-60	81.42	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JDL7_9PHAE	4.100e-57	80.53	LisH domain-containing protein n=1 Tax=Ectocarpus ...	[more]
J9K6N6_ACYPI	1.570e-21	42.73	LisH domain-containing protein n=1 Tax=Acyrthosiph...	[more]
A0A3M6VCW5_9STRA	1.020e-20	46.90	LisH domain-containing protein n=2 Tax=Peronospora...	[more]
A0A662Y0Y0_9STRA	1.030e-20	46.90	LisH domain-containing protein n=2 Tax=Nothophytop...	[more]
A0A0D2WKX1_CAPO3	1.030e-20	42.20	LisH domain-containing protein n=2 Tax=Capsaspora ...	[more]
J9JR27_ACYPI	1.390e-20	42.73	LisH domain-containing protein n=17 Tax=Aphidinae ...	[more]
A0A6A4G491_9STRA	1.670e-20	46.90	Uncharacterized protein n=4 Tax=Phytophthora TaxID...	[more]
A0A6A3F5T6_9STRA	2.550e-20	46.90	LisH domain-containing protein n=2 Tax=Phytophthor...	[more]
A0A6A3N5G8_9STRA	2.590e-20	46.90	LisH domain-containing protein n=1 Tax=Phytophthor...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..112 e-value: 3.3E-29 score: 103.7
IPR033270	VPRBP/DCAF1 family	PANTHER	PTHR13129	VPRBP PROTEIN-RELATED	coord: 2..110
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 2..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig94996	contig	H-elongata_contig94996:419..1847 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig94996.16910.1	mRNA_H-elongata_contig94996.16910.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig94996 419..1847 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig94996.16910.1 ID=prot_H-elongata_contig94996.16910.1|Name=mRNA_H-elongata_contig94996.16910.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=113bp
QILDVETGRLLARLWDARYPLYPRPNVAFNATDELVVTDGALWDPRRGAR
VHQFDKLGSGCGHGLFHPNGNEVLVDEGVWDLRTHRLLRTLLCQEGALMK
PSPGGEVLYTYR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR033270	VPRBP/DCAF1
IPR011047	Quinoprotein_ADH-like_supfam