prot_H-elongata_contig94966.16908.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig94966.16908.1
Unique Nameprot_H-elongata_contig94966.16908.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length184
Homology
BLAST of mRNA_H-elongata_contig94966.16908.1 vs. uniprot
Match: D7G2L3_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L3_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 1.250e-103
Identity = 159/183 (86.89%), Postives = 171/183 (93.44%), Query Frame = 0
Query:    1 AFAIPVIEKLL-ASCAPLRRGRAPRVLVMAPTRELAKQVASDFELTSPSLETTCIYGGAPYRPQEIALRNGLDVVVGTPGRLLDHVGRGNLRLGDTEFIILDEADQMLDMGFKDEMEKVFEACGEEGDRGRQMLLFSATMPPWVEKVVKEYMKDDRVFIDLVKEGTVKASKDVEHIGIPCHWT 182
            AFA+PVIEKLL A    L+ GR PRVLVMAPTRELAKQVA+DFELT+PSL+TTCIYGGAPYRPQE ALR G+DVVVGTPGRLLDHVGRG L+L D EFIILDEADQMLDMGFK+EMEKVFEACGEEG++GRQMLLFSATMPPWV+KVVKEYMK+DRVFIDLVKEGTVKASKDVEHIGIPCHWT
Sbjct:  200 AFAVPVIEKLLMAGAGSLKPGRKPRVLVMAPTRELAKQVAADFELTAPSLKTTCIYGGAPYRPQEDALRWGVDVVVGTPGRLLDHVGRGTLQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGEEGEQGRQMLLFSATMPPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWT 382          
BLAST of mRNA_H-elongata_contig94966.16908.1 vs. uniprot
Match: A0A836CJP1_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP1_9STRA)

HSP 1 Score: 236 bits (602), Expect = 5.910e-71
Identity = 120/186 (64.52%), Postives = 142/186 (76.34%), Query Frame = 0
Query:    1 AFAIPVIEKLL-ASCAPLRRGRAPRVLVMAPTRELAKQVASDFELTSPSLETTCIYGGAPYRPQEIALRNGLDVVVGTPGRLLDHVGRGNLRLGDTEFIILDEADQMLDMGFKDEMEKVFEACGEEGD----RGRQMLLFSATMPPWVEKVVKEYMKDDRVFIDLVKEGTVKASKDVEHIGIPCHW 181
            AFA+PVIE LL  +       R PRVLVMAPTRELAKQVA+DFE T+P L TT IYGGAPYRPQE ALR G+D+VVGTPGR++D + RG L+L  T++ ILDEADQMLDMGFK+EMEKVF  C  E D    R  Q LLFSATMP WV++V K+YMK DR++IDLV    VKAS+DV+H+ +PC W
Sbjct:  193 AFALPVIEGLLRGNIGAAAARRFPRVLVMAPTRELAKQVAADFESTAPQLRTTTIYGGAPYRPQEEALRRGVDIVVGTPGRIIDMMDRGTLKLDQTDYFILDEADQMLDMGFKEEMEKVFAQCRGEADGAERREVQTLLFSATMPEWVQRVAKDYMKADRMYIDLVGNSAVKASQDVQHVAVPCQW 378          
BLAST of mRNA_H-elongata_contig94966.16908.1 vs. uniprot
Match: A0A3R7GZH5_9STRA (RNA helicase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GZH5_9STRA)

HSP 1 Score: 228 bits (581), Expect = 3.440e-68
Identity = 112/184 (60.87%), Postives = 142/184 (77.17%), Query Frame = 0
Query:    1 AFAIPVIEKLLASCAPLRRGRAPRVLVMAPTRELAKQVASDFELTSPSLETTCIYGGAPYRPQEIALRNGLDVVVGTPGRLLDHVGRGNLRLGDTEFIILDEADQMLDMGFKDEMEKVFEACGE---EGDRGRQMLLFSATMPPWVEKVVKEYMKDDRVFIDLVKEGTVKASKDVEHIGIPCHW 181
            AFA+PVIEKLL    P  RGRAPRV+ MAPTRELAKQVAS+FE T+PSL T CIYGGA Y+ Q  A R+G+D++VGT GR++DH+ RGNLRL + EF+ILDEAD ML+MGF+++++KVF A  +   EG   RQ LLFSAT+P WV  V  +YM+ DR +++LVK+   +AS DV+HI IPCHW
Sbjct:  153 AFALPVIEKLLLDQRPRSRGRAPRVVCMAPTRELAKQVASEFETTAPSLATVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKVFAAMNQVKNEGTGKRQTLLFSATIPKWVTDVADKYMEKDREYVNLVKDSDDQASTDVQHIAIPCHW 336          
BLAST of mRNA_H-elongata_contig94966.16908.1 vs. uniprot
Match: K3WZA1_GLOUD (RNA helicase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZA1_GLOUD)

HSP 1 Score: 227 bits (578), Expect = 1.820e-67
Identity = 111/183 (60.66%), Postives = 142/183 (77.60%), Query Frame = 0
Query:    1 AFAIPVIEKLLASCAPLRRGRAPRVLVMAPTRELAKQVASDFELTSPSLETTCIYGGAPYRPQEIALRNGLDVVVGTPGRLLDHVGRGNLRLGDTEFIILDEADQMLDMGFKDEMEKVFEACGEEGDRG--RQMLLFSATMPPWVEKVVKEYMKDDRVFIDLVKEGTVKASKDVEHIGIPCHW 181
            AFA+PVIE LL +  PL RGRAPRV+ MAPTRELAKQVA++FE T PSL T CIYGGA Y  Q  A R G+D++VGT GR++DH+ RGNLRL + EF+ILDEAD ML+MGF+++++KVF A  +  +    RQ+LLFSAT+P WV++V  +YMK DR +++LVK+   KAS DV+HI IPCHW
Sbjct:  159 AFALPVIELLLKNAKPLVRGRAPRVVCMAPTRELAKQVATEFETTGPSLSTVCIYGGASYNSQNDAFRKGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKVFAAMEKVKNEQMKRQILLFSATIPSWVKEVADKYMKKDREYVNLVKDSDNKASMDVQHIAIPCHW 341          
BLAST of mRNA_H-elongata_contig94966.16908.1 vs. uniprot
Match: A0A7R9U1A7_9STRA (RNA helicase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1A7_9STRA)

HSP 1 Score: 225 bits (573), Expect = 2.600e-66
Identity = 114/190 (60.00%), Postives = 143/190 (75.26%), Query Frame = 0
Query:    1 AFAIPVIEKLLA----SCAPLRRGRAPRVLVMAPTRELAKQVASDFELTSPSLETTCIYGGAPYRPQEIALRNGLDVVVGTPGRLLDHVGRGNLRLGDTEFIILDEADQMLDMGFKDEMEKVFEACG--EEGDRG---RQMLLFSATMPPWVEKVVKEYMKDDRVFIDLVKEGTVKASKDVEHIGIPCHW 181
            AFA+PVIE++L       A   RGR P VL MAPTRELAKQVA DFELT+PSL + C+YGGAP+ PQ   L +G+D+V+GTPGR++DH+ RGNLRL    F ILDEADQMLDMGFK+E+E++F A G  EEGD     RQ LLFSAT+P WV +V K+++++D + IDLV + T+KAS DV HI +PCHW
Sbjct:  206 AFALPVIERVLQMRRDGIASRGRGRPPLVLCMAPTRELAKQVAQDFELTAPSLTSLCVYGGAPFDPQIRTLHSGVDIVIGTPGRVVDHINRGNLRLQHLRFAILDEADQMLDMGFKEELEQIFAAMGSAEEGDGRDWPRQTLLFSATLPAWVGEVKKQFLREDCLSIDLVGDSTIKASTDVSHIAVPCHW 395          
BLAST of mRNA_H-elongata_contig94966.16908.1 vs. uniprot
Match: A0A662X2W6_9STRA (RNA helicase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2W6_9STRA)

HSP 1 Score: 223 bits (569), Expect = 4.430e-66
Identity = 112/185 (60.54%), Postives = 141/185 (76.22%), Query Frame = 0
Query:    1 AFAIPVIEKLLASCAPLRRGRAPRVLVMAPTRELAKQVASDFELTSPSLETTCIYGGAPYRPQEIALRNGLDVVVGTPGRLLDHVGRGNLRLGDTEFIILDEADQMLDMGFKDEMEKVFEAC----GEEGDRGRQMLLFSATMPPWVEKVVKEYMKDDRVFIDLVKEGTVKASKDVEHIGIPCHW 181
            AFA+PVIE LL    P  RGRAPRV+ MAPTRELAKQVA++FE T PSL T CIYGGA Y+ Q  A R+G+D++VGT GR++DH+ RGNLRL + EF+ILDEAD ML+MGF+++++KVF A      E+  R RQ LLFSAT+P WV  V  +YM+ DR F++LVK+  V+AS DV+HI IPCHW
Sbjct:  168 AFALPVIELLLQDKKPRARGRAPRVVCMAPTRELAKQVATEFEQTGPSLSTVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKVFAAMEQVKNEKAGR-RQTLLFSATIPKWVTDVADKYMQKDREFVNLVKDSDVQASTDVQHIAIPCHW 351          
BLAST of mRNA_H-elongata_contig94966.16908.1 vs. uniprot
Match: A0A1V9YZB2_9STRA (RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZB2_9STRA)

HSP 1 Score: 222 bits (566), Expect = 6.170e-66
Identity = 106/181 (58.56%), Postives = 141/181 (77.90%), Query Frame = 0
Query:    1 AFAIPVIEKLLASCAPLRRGRAPRVLVMAPTRELAKQVASDFELTSPSLETTCIYGGAPYRPQEIALRNGLDVVVGTPGRLLDHVGRGNLRLGDTEFIILDEADQMLDMGFKDEMEKVFEACGEEGDRGRQMLLFSATMPPWVEKVVKEYMKDDRVFIDLVKEGTVKASKDVEHIGIPCHW 181
            AF +PV+E+L+A    + RGRA +V+ MAPTRELAKQVA++FE T+PSL+TTCIYGGA Y+ Q    RNG+D+VVGT GR+ DH+ RG L+L D EF+ILDEAD ML+MGF+++++KVFEA         Q LLFSAT+P W+++V K+YMK DRV+I++V +   +ASKDV+HI IPCHW
Sbjct:  134 AFVLPVVERLIAEGKRVHRGRAAKVICMAPTRELAKQVATEFEQTAPSLKTTCIYGGASYQSQNQDFRNGVDIVVGTTGRICDHLDRGTLKLTDCEFLILDEADTMLEMGFREDIQKVFEAIA-ASKTVHQTLLFSATIPSWLDQVAKKYMKPDRVYINMVNDNEDQASKDVQHIAIPCHW 313          
BLAST of mRNA_H-elongata_contig94966.16908.1 vs. uniprot
Match: A0A2D4BW06_PYTIN (RNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW06_PYTIN)

HSP 1 Score: 226 bits (575), Expect = 7.710e-66
Identity = 112/184 (60.87%), Postives = 141/184 (76.63%), Query Frame = 0
Query:    1 AFAIPVIEKLLASCAPLRRGRAPRVLVMAPTRELAKQVASDFELTSPSLETTCIYGGAPYRPQEIALRNGLDVVVGTPGRLLDHVGRGNLRLGDTEFIILDEADQMLDMGFKDEMEKVF---EACGEEGDRGRQMLLFSATMPPWVEKVVKEYMKDDRVFIDLVKEGTVKASKDVEHIGIPCHW 181
            AFA+PVIE LL    P R GRAPRV+ MAPTRELAKQVA++FELT PSL T CIYGGA Y+ Q  A R G+DV+VGT GR++DH+ RGNLRL   EF+ILDEAD ML+MGF+++++KVF   EA   E    RQ+LLFSAT+P WV++V  +YM+ DR +++LVK+   +AS DV+HI IPCHW
Sbjct:  163 AFALPVIELLLKDTRPKRAGRAPRVVCMAPTRELAKQVATEFELTGPSLSTVCIYGGASYQSQNNAFRQGVDVLVGTTGRVIDHIERGNLRLHACEFLILDEADTMLEMGFREDVQKVFAAMEAVQNEKAMRRQILLFSATIPAWVKEVADKYMRKDREYVNLVKDSEDQASTDVQHIAIPCHW 346          
BLAST of mRNA_H-elongata_contig94966.16908.1 vs. uniprot
Match: A0A0N7L6A4_PLAHL (Dead deah box rna n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6A4_PLAHL)

HSP 1 Score: 219 bits (557), Expect = 1.600e-65
Identity = 111/184 (60.33%), Postives = 139/184 (75.54%), Query Frame = 0
Query:    1 AFAIPVIEKLLASCAPLRRGRAPRVLVMAPTRELAKQVASDFELTSPSLETTCIYGGAPYRPQEIALRNGLDVVVGTPGRLLDHVGRGNLRLGDTEFIILDEADQMLDMGFKDEMEKVF---EACGEEGDRGRQMLLFSATMPPWVEKVVKEYMKDDRVFIDLVKEGTVKASKDVEHIGIPCHW 181
            AFA+PVIE LL    P  RGRAPRV+ MAPTRELAKQVAS+FELT PSL T CIYGGA Y+ Q  A R+G+D++VGT GR++DH+ RGNLRL + EF+ILDEAD ML+MGF+++++KVF   E    E    RQMLLFSAT+P WV+ V  +YMK    +++LVK+   +AS DV+HI IPCHW
Sbjct:   76 AFALPVIELLLKDKRPRARGRAPRVICMAPTRELAKQVASEFELTGPSLSTVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKVFTAMEMVQNERTGKRQMLLFSATIPRWVKDVADKYMKKAE-YVNLVKDSDDQASTDVQHIAIPCHW 258          
BLAST of mRNA_H-elongata_contig94966.16908.1 vs. uniprot
Match: A0A6G0RJ92_9STRA (RNA helicase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0RJ92_9STRA)

HSP 1 Score: 222 bits (565), Expect = 1.780e-65
Identity = 109/184 (59.24%), Postives = 141/184 (76.63%), Query Frame = 0
Query:    1 AFAIPVIEKLLASCAPLRRGRAPRVLVMAPTRELAKQVASDFELTSPSLETTCIYGGAPYRPQEIALRNGLDVVVGTPGRLLDHVGRGNLRLGDTEFIILDEADQMLDMGFKDEMEKVFEACGE---EGDRGRQMLLFSATMPPWVEKVVKEYMKDDRVFIDLVKEGTVKASKDVEHIGIPCHW 181
            AFA+PVIE LL    P  RGRAPRV+ MAPTRELAKQVA++FE ++PSL T CIYGGA Y+ Q  A R+G+D++VGT GR++DH+ RGNLRL + EF+ILDEAD ML+MGF+++++KVF A  +   E    RQ LLFSAT+P WV+ V  +YM+ DR +++LVKE   +AS DV+HI IPCHW
Sbjct:  170 AFALPVIELLLKDKRPRARGRAPRVVCMAPTRELAKQVATEFEQSAPSLSTVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKVFAAMEQVKNESAATRQTLLFSATIPKWVKDVADKYMQKDREYVNLVKESDSQASTDVQHIAIPCHW 353          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94966.16908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2L3_ECTSI1.250e-10386.89RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A836CJP1_9STRA5.910e-7164.52RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A3R7GZH5_9STRA3.440e-6860.87RNA helicase n=3 Tax=Phytophthora kernoviae TaxID=... [more]
K3WZA1_GLOUD1.820e-6760.66RNA helicase n=1 Tax=Globisporangium ultimum (stra... [more]
A0A7R9U1A7_9STRA2.600e-6660.00RNA helicase n=1 Tax=Pinguiococcus pyrenoidosus Ta... [more]
A0A662X2W6_9STRA4.430e-6660.54RNA helicase n=2 Tax=Nothophytophthora sp. Chile5 ... [more]
A0A1V9YZB2_9STRA6.170e-6658.56RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772... [more]
A0A2D4BW06_PYTIN7.710e-6660.87RNA helicase n=1 Tax=Pythium insidiosum TaxID=1147... [more]
A0A0N7L6A4_PLAHL1.600e-6560.33Dead deah box rna n=1 Tax=Plasmopara halstedii Tax... [more]
A0A6G0RJ92_9STRA1.780e-6559.24RNA helicase n=4 Tax=Phytophthora TaxID=4783 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1..175
e-value: 5.3E-28
score: 109.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..157
score: 26.228
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 1..146
e-value: 9.1E-35
score: 120.0
NoneNo IPR availableGENE3D3.40.50.300coord: 1..161
e-value: 3.3E-50
score: 172.3
NoneNo IPR availablePANTHERPTHR24031:SF346DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21coord: 1..182
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..182
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94966contigH-elongata_contig94966:3..2171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94966.16908.1mRNA_H-elongata_contig94966.16908.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig94966 3..2171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig94966.16908.1 ID=prot_H-elongata_contig94966.16908.1|Name=mRNA_H-elongata_contig94966.16908.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp
AFAIPVIEKLLASCAPLRRGRAPRVLVMAPTRELAKQVASDFELTSPSLE
TTCIYGGAPYRPQEIALRNGLDVVVGTPGRLLDHVGRGNLRLGDTEFIIL
DEADQMLDMGFKDEMEKVFEACGEEGDRGRQMLLFSATMPPWVEKVVKEY
MKDDRVFIDLVKEGTVKASKDVEHIGIPCHWTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase