prot_H-elongata_contig94788.16891.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig94788.16891.1
Unique Nameprot_H-elongata_contig94788.16891.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length164
Homology
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BLAST of mRNA_H-elongata_contig94788.16891.1 vs. uniprot
Match: D7FSH8_ECTSI (RHD3b, RHD3/Sey1 family GTPase involved in the ER-to-Golgi traffic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH8_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 1.960e-57
Identity = 108/160 (67.50%), Postives = 134/160 (83.75%), Query Frame = 0 
Query:    1 KGFAGASLEDVLDVKVSCLAHHSFASDQFLLEVERLKSSVVEGEAETPAAEVARLLQQISAYAGPATESFSIKALAASFVANAAAVKCMASFRSLVGRMGSAFAELNTDFGELCDGLMDTVLEEFEKEVEG-SGHQVVSGVVSRKQAELKRNMLRELGER 159
            +GFAG++L DVLDVKV  L HHSFASD++LL    LK+SV++G A TPA EVARLLQQ+S+YAGPATES    AL ASF++++AAVKCMASF+SLVGRMG+ F ELNTDFGELCDG++DTVL+E+++ V+G SG    SGV+SRK+AELKR+ LRELG R
Sbjct:  199 EGFAGSALSDVLDVKVFTLPHHSFASDEYLLGAGLLKNSVMDGAAGTPAVEVARLLQQVSSYAGPATESVGSNALTASFISSSAAVKCMASFKSLVGRMGAGFEELNTDFGELCDGVIDTVLQEYDEAVDGVSG---ASGVLSRKKAELKRHCLRELGLR 355
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BLAST of mRNA_H-elongata_contig94788.16891.1 vs. uniprot
Match: A0A6H5JWB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB1_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.600e-26
Identity = 62/93 (66.67%), Postives = 76/93 (81.72%), Query Frame = 0 
Query:    1 KGFAGASLEDVLDVKVSCLAHHSFASDQFLLEVERLKSSVVEGEAETPAAEVARLLQQISAYAGPATESFSIKALAASFVANAAAVKCMASFR 93
            +GFAG++L DVLDVKV  L HHSFASD++LL    LK+SV+ G A TPA EVARLLQQ+S+YAGPATES    AL ASF++++AAVKCMASF+
Sbjct:  199 EGFAGSALSDVLDVKVFTLPHHSFASDEYLLGAGLLKNSVMNGAAGTPAVEVARLLQQVSSYAGPATESVGSNALTASFISSSAAVKCMASFK 291
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94788.16891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSH8_ECTSI1.960e-5767.50RHD3b, RHD3/Sey1 family GTPase involved in the ER-... [more]
A0A6H5JWB1_9PHAE1.600e-2666.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94788contigH-elongata_contig94788:407..2077 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94788.16891.1mRNA_H-elongata_contig94788.16891.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig94788 407..2077 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig94788.16891.1 ID=prot_H-elongata_contig94788.16891.1|Name=mRNA_H-elongata_contig94788.16891.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
KGFAGASLEDVLDVKVSCLAHHSFASDQFLLEVERLKSSVVEGEAETPAA
EVARLLQQISAYAGPATESFSIKALAASFVANAAAVKCMASFRSLVGRMG
SAFAELNTDFGELCDGLMDTVLEEFEKEVEGSGHQVVSGVVSRKQAELKR
NMLRELGERWWPV*
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