prot_H-elongata_contig94751.16889.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig94751.16889.1
Unique Nameprot_H-elongata_contig94751.16889.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
BLAST of mRNA_H-elongata_contig94751.16889.1 vs. uniprot
Match: D7FVU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU9_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 2.880e-26
Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 MSASTPSSDWPRNGTLLKGWYVHEHPGWVKIHHPKSYWLPIMQHGKAVLHEI 52
            M ++T SSDWPRNGT+LKGWYV EHPGWVKI HP+ YW+P+ QHGKAV+HE+
Sbjct:   29 MGSTTSSSDWPRNGTMLKGWYVTEHPGWVKIDHPEGYWMPVEQHGKAVMHEV 80          
BLAST of mRNA_H-elongata_contig94751.16889.1 vs. uniprot
Match: A0A835ZIY5_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIY5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.480e-20
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 MSASTPSSDWPRNGTLLKGWYVHEHPGWVKIHHPKSYWLPIMQHGKAVLHE 51
            M A+  +SDWPRNG++L GWYV EHPGWV+I HP  YW+P+ Q G  VLHE
Sbjct:   29 MGATASASDWPRNGSVLHGWYVQEHPGWVRIDHPNGYWMPVEQDGHTVLHE 79          
BLAST of mRNA_H-elongata_contig94751.16889.1 vs. uniprot
Match: A0A835XUH0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XUH0_9CHLO)

HSP 1 Score: 82.4 bits (202), Expect = 2.330e-19
Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 MSASTPSSDWPRNGTLLKGWYVHEHPGWVKIHHPKSYWLPIMQHGKAVLH 50
            M+AS  + DWPRNG   KGW   EHPGWVK+ HPK YWLPI QHGK V H
Sbjct:   35 MNASVQAPDWPRNGATFKGWKSVEHPGWVKVDHPKDYWLPIEQHGKPVCH 84          
BLAST of mRNA_H-elongata_contig94751.16889.1 vs. uniprot
Match: A0A8J4FZJ0_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FZJ0_9CHLO)

HSP 1 Score: 81.3 bits (199), Expect = 1.450e-18
Identity = 32/50 (64.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 MSASTPSSDWPRNGTLLKGWYVHEHPGWVKIHHPKSYWLPIMQHGKAVLH 50
            M+AS  + DWPRNGT+ KGW   EHPGWVK+ HPK YWLPI Q+G  V H
Sbjct:   64 MNASVSAPDWPRNGTVFKGWKSLEHPGWVKVDHPKGYWLPIQQYGNDVCH 113          
BLAST of mRNA_H-elongata_contig94751.16889.1 vs. uniprot
Match: A0A8J4G156_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4G156_9CHLO)

HSP 1 Score: 81.3 bits (199), Expect = 1.650e-18
Identity = 32/50 (64.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 MSASTPSSDWPRNGTLLKGWYVHEHPGWVKIHHPKSYWLPIMQHGKAVLH 50
            M+AS  + DWPRNGT+ KGW   EHPGWVK+ HPK YWLPI Q+G  V H
Sbjct:   69 MNASVSAPDWPRNGTVFKGWKSLEHPGWVKVDHPKGYWLPIQQYGNDVCH 118          
BLAST of mRNA_H-elongata_contig94751.16889.1 vs. uniprot
Match: A0A150GII6_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GII6_GONPE)

HSP 1 Score: 79.7 bits (195), Expect = 5.420e-18
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    1 MSASTPSSDWPRNGTLLKGWYVHEHPGWVKIHHPKSYWLPIMQHGKAVLH 50
            M+AS  + DWPRNGT+ KGW   EHPGWVK+ HP++YWLPI Q+G  V H
Sbjct:   61 MNASVNAPDWPRNGTVFKGWKSVEHPGWVKVDHPQNYWLPIQQYGNDVCH 110          
BLAST of mRNA_H-elongata_contig94751.16889.1 vs. uniprot
Match: A0A6H5KXI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI4_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 8.270e-8
Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 0
Query:    1 MSASTPSSDWPRNGTLLKGWYVHEHPG 27
            M ++T S DWPRNGT+LKGWYV EHPG
Sbjct:   29 MGSTTSSPDWPRNGTMLKGWYVAEHPG 55          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94751.16889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FVU9_ECTSI2.880e-2673.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZIY5_9STRA2.480e-2062.75Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835XUH0_9CHLO2.330e-1966.00Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A8J4FZJ0_9CHLO1.450e-1864.00Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]
A0A8J4G156_9CHLO1.650e-1864.00Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]
A0A150GII6_GONPE5.420e-1862.00Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A6H5KXI4_9PHAE8.270e-874.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94751contigH-elongata_contig94751:1719..2152 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94751.16889.1mRNA_H-elongata_contig94751.16889.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig94751 1719..2167 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig94751.16889.1 ID=prot_H-elongata_contig94751.16889.1|Name=mRNA_H-elongata_contig94751.16889.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
MSASTPSSDWPRNGTLLKGWYVHEHPGWVKIHHPKSYWLPIMQHGKAVLH
EIKEG*
back to top