prot_H-elongata_contig94728.16886.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig94728.16886.1
Unique Nameprot_H-elongata_contig94728.16886.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length123
Homology
BLAST of mRNA_H-elongata_contig94728.16886.1 vs. uniprot
Match: B3VMZ8_FUCSE (Heat shock protein 20 n=2 Tax=Fucus serratus TaxID=87148 RepID=B3VMZ8_FUCSE)

HSP 1 Score: 196 bits (498), Expect = 6.760e-62
Identity = 99/122 (81.15%), Postives = 113/122 (92.62%), Query Frame = 0
Query:    1 MSITRTGSIDPFRHAMHDVFDSMERDLMAPSGMSSRFPTGGFPGSSIALLSAIPTVGVKEGFGMNLDFHETSKGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREKKNECDNEQRK 122
            MS++R GSIDPFR AMHDVFDSMERDLMAPSGMSSRF T  FPGSS+AL+SA+P++GV+ G GMNLDFHET+KG+ELSADLPGMKKEDI VDID+ESGVLTVTGER+QERE+K+E DNEQRK
Sbjct:    1 MSLSRAGSIDPFRRAMHDVFDSMERDLMAPSGMSSRFHTMDFPGSSVALVSAVPSMGVEGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRK 122          
BLAST of mRNA_H-elongata_contig94728.16886.1 vs. uniprot
Match: D7FUU6_ECTSI (Small heat shock protein heat shock protein 20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU6_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 5.060e-25
Identity = 54/101 (53.47%), Postives = 74/101 (73.27%), Query Frame = 0
Query:   16 MHDVFDSMERDLMAPSGMSSRFPTGGFPGSSIALLSAIPTVGVKEG---FGMNLDFHETSKGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREKK 113
            ++DVF S+ER+++AP G++SRFPT      +  +    PT    +G    GM+LDFHET  GFEL ADLPGMKKED+++D+D ESGVLTV+GER+ E+E+K
Sbjct:   20 INDVFGSIEREMLAPWGLASRFPT------TRDMFPTFPTSLFGDGSRSLGMSLDFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSEKEEK 114          
BLAST of mRNA_H-elongata_contig94728.16886.1 vs. uniprot
Match: A0A6H5JPQ3_9PHAE (HSP20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ3_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.720e-19
Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 0
Query:   27 LMAPSGMSSRFPTGGFPGSSIALLSAIPTVGVKEGFGMNLDFHETSKGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREK 112
            ++AP G +SRFPT      S++  S++   G +    MNLDFHET  GFEL ADLPGMK+ED+++D+D ESGVLTV+GER+ +REK
Sbjct:    1 MLAPWGFASRFPTARDMVPSVS--SSLFRDGSRS-LDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSKREK 83          
BLAST of mRNA_H-elongata_contig94728.16886.1 vs. uniprot
Match: A0A6H5JFM4_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM4_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 2.970e-19
Identity = 55/133 (41.35%), Postives = 74/133 (55.64%), Query Frame = 0
Query:   18 DVFDSMERDLMAPSGMSSRFPTGGFPGSSIALLSA-------------------------------IPTVG---VKEG---FGMNLDFHETSKGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREKK 113
            DVF S+ER+++AP G++SRFPT      S   +                                 +P+V     ++G     MNLDFHET  GFEL ADLPGMK+ED+++D+D ESGVLTV+GER+ ERE+K
Sbjct:    7 DVFGSIEREMLAPWGLASRFPTASHMRYSTLRVHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMVPSVSSSLFRDGSRSLDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSEREEK 139          
BLAST of mRNA_H-elongata_contig94728.16886.1 vs. uniprot
Match: A0A6H5KKF0_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF0_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.810e-18
Identity = 46/87 (52.87%), Postives = 64/87 (73.56%), Query Frame = 0
Query:   27 LMAPSGMSSRFPTGGFPGSSIALLSAIPTVGVKEGFGMNLDFHETSKGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREKK 113
            ++AP G++ RFPT      S++  S++   G +    MNLDFHET  GFEL ADLPGMK+ED+++D+D ESGVLTV+GER+ +RE+K
Sbjct:    1 MLAPWGLAFRFPTARDMVPSVS--SSLFRDGSRS-LDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSKREEK 84          
BLAST of mRNA_H-elongata_contig94728.16886.1 vs. uniprot
Match: I1HBS1_BRADI (SHSP domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1HBS1_BRADI)

HSP 1 Score: 60.5 bits (145), Expect = 5.230e-9
Identity = 39/116 (33.62%), Postives = 61/116 (52.59%), Query Frame = 0
Query:    1 MSITRTGSI-DPFRHAMHDVFDSMERDLMAPSGMSSRFPTGGFPGSSIALLSAIPTVGVKEGFGMNLDFHETSKGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREKKNE 115
            MS+ R GS+ DPF   + D  DS+ R ++  +  SS F T  F  +                    +D+ ET +     ADLPG+KKE++ V++++   VL V+GER +E+E KN+
Sbjct:    1 MSLVRRGSVFDPFSQDLWDPIDSIFRSIVPAAAASSDFDTAAFVNA-------------------RMDWKETPEAHVFKADLPGVKKEEVKVEVED-GNVLVVSGERSREKEDKND 96          
BLAST of mRNA_H-elongata_contig94728.16886.1 vs. uniprot
Match: A0A6J0ZW59_9ROSI (17.3 kDa class I heat shock protein-like n=1 Tax=Herrania umbratica TaxID=108875 RepID=A0A6J0ZW59_9ROSI)

HSP 1 Score: 58.9 bits (141), Expect = 2.260e-8
Identity = 34/96 (35.42%), Postives = 56/96 (58.33%), Query Frame = 0
Query:   20 FDSMERDLMAPSGMSSRFPTGGFPGSSIALLSAIPTVGVKEGFGMNLDFHETSKGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREKKNE 115
            F +    +  P  +  R P   FP SS + L+AI           ++D+ ETS+     ADLPG+KKE++ V+I+++  VL ++GER+ E+E+KN+
Sbjct:    8 FGNRRSSIFDPCSVDLRDPCKDFPFSSFSSLAAIHNPETSAFVNTHIDWKETSEAHVFKADLPGLKKEEVKVEIEDDR-VLQISGERKVEKEEKND 102          
BLAST of mRNA_H-elongata_contig94728.16886.1 vs. uniprot
Match: UPI0006B511B7 (Hsp20/alpha crystallin family protein n=1 Tax=Desulfatitalea tepidiphila TaxID=1185843 RepID=UPI0006B511B7)

HSP 1 Score: 57.8 bits (138), Expect = 4.930e-8
Identity = 39/105 (37.14%), Postives = 54/105 (51.43%), Query Frame = 0
Query:   10 DPFRHAMHDVFDSMERDLMAPSGMSSRFPTGGFPGSSIALLSAIPTVGVKEGFGMNLDFHETSKGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREKKN 114
            DPF+  M DVFD   R L  P   S +    G                    +   +D  ET K F + A++P +KKED++V +DN  GVLT+ GER+QE+E+KN
Sbjct:    7 DPFKE-MEDVFDRYTRALDWPRRSSQQMMATG-------------------DWAPRVDISETEKEFMIKAEIPEVKKEDVSVTVDN--GVLTIRGERKQEKEEKN 89          
BLAST of mRNA_H-elongata_contig94728.16886.1 vs. uniprot
Match: A0A0D2UFN1_CAPO3 (Small HspC2 heat shock protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UFN1_CAPO3)

HSP 1 Score: 58.2 bits (139), Expect = 5.960e-8
Identity = 26/47 (55.32%), Postives = 41/47 (87.23%), Query Frame = 0
Query:   66 LDFHETSKGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREK 112
            +D HE+S G+ +SADLPGMKK++I+V+ +N  G+LT++GE++QE+EK
Sbjct:   76 VDVHESSDGYHISADLPGMKKDEISVNCEN--GILTISGEKKQEQEK 120          
BLAST of mRNA_H-elongata_contig94728.16886.1 vs. uniprot
Match: A0A8J5WXA2_ZIZPA (SHSP domain-containing protein n=2 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WXA2_ZIZPA)

HSP 1 Score: 55.5 bits (132), Expect = 4.460e-7
Identity = 36/111 (32.43%), Postives = 56/111 (50.45%), Query Frame = 0
Query:    3 ITRTGSIDPFRHAMHDVFDSMERDLMAPSGMSSRFPTGGFPGSSIALLSAIPTVGVKEGFGMNLDFHETSKGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREKK 113
            I R+   DPF   + D FD       + SG  S FP   F  +S A              G  +D+ ET +     AD+PG+KKE++ V++++   +L ++GER QE+E+K
Sbjct:    4 IRRSNVFDPFSFDLWDPFDGFP--FGSGSGSGSLFPRSSFDPTSFA--------------GARIDWKETGEAHVFKADVPGLKKEEVKVEVED-GNILQISGERLQEQEEK 97          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94728.16886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B3VMZ8_FUCSE6.760e-6281.15Heat shock protein 20 n=2 Tax=Fucus serratus TaxID... [more]
D7FUU6_ECTSI5.060e-2553.47Small heat shock protein heat shock protein 20 n=1... [more]
A0A6H5JPQ3_9PHAE1.720e-1954.65HSP20 protein (Fragment) n=1 Tax=Ectocarpus sp. CC... [more]
A0A6H5JFM4_9PHAE2.970e-1941.35HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5KKF0_9PHAE3.810e-1852.87HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
I1HBS1_BRADI5.230e-933.62SHSP domain-containing protein n=1 Tax=Brachypodiu... [more]
A0A6J0ZW59_9ROSI2.260e-835.4217.3 kDa class I heat shock protein-like n=1 Tax=H... [more]
UPI0006B511B74.930e-837.14Hsp20/alpha crystallin family protein n=1 Tax=Desu... [more]
A0A0D2UFN1_CAPO35.960e-855.32Small HspC2 heat shock protein n=1 Tax=Capsaspora ... [more]
A0A8J5WXA2_ZIZPA4.460e-732.43SHSP domain-containing protein n=2 Tax=Zizania pal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 2..121
e-value: 1.2E-14
score: 56.2
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 57..116
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 68..116
e-value: 1.9E-7
score: 31.1
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 57..122
score: 13.642
NoneNo IPR availablePANTHERPTHR11527:SF175HEAT SHOCK PROTEIN 42coord: 18..114
IPR031107Small heat shock protein HSP20PANTHERPTHR11527HEAT-SHOCK PROTEIN 20 FAMILY MEMBERcoord: 18..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94728contigH-elongata_contig94728:305..1260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94728.16886.1mRNA_H-elongata_contig94728.16886.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig94728 305..1260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig94728.16886.1 ID=prot_H-elongata_contig94728.16886.1|Name=mRNA_H-elongata_contig94728.16886.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
MSITRTGSIDPFRHAMHDVFDSMERDLMAPSGMSSRFPTGGFPGSSIALL
SAIPTVGVKEGFGMNLDFHETSKGFELSADLPGMKKEDITVDIDNESGVL
TVTGERRQEREKKNECDNEQRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom
IPR031107HSP20