prot_H-elongata_contig9459.16880.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9459.16880.1
Unique Nameprot_H-elongata_contig9459.16880.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
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BLAST of mRNA_H-elongata_contig9459.16880.1 vs. uniprot
Match: D7FJI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI5_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 5.340e-30
Identity = 61/103 (59.22%), Postives = 75/103 (72.82%), Query Frame = 0 
Query:    1 VRPYYGLYARSLQANGLEPKYFRTSQCSCNQYCRRVAGVSIAAGERGGAQSRSRAPTQGIPDRLEAGRIWVSLNRRAELLGTLPPTPLREKASWMGKPSDPQY 103
            VRPY GLYARSLQANG+EP +FR+S+CSC+    R    S+   +R  A +R+R+P  G+PDRLEAGR+  S  RRAELLG +PPT LR K +WM KP DPQY
Sbjct:  531 VRPYNGLYARSLQANGIEPAHFRSSRCSCHTTEHRQIDGSVLWPDRENA-ARTRSPVDGLPDRLEAGRVLDSFERRAELLGKMPPTTLRAKTAWMEKPGDPQY 632
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BLAST of mRNA_H-elongata_contig9459.16880.1 vs. uniprot
Match: A0A6H5L0G8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0G8_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 6.350e-29
Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 0 
Query:    1 VRPYYGLYARSLQANGLEPKYFRTSQCSCNQYCRRVAGVSIAAGERGGAQSRSRAPTQGIPDRLEAGRIWVSLNRRAELLGTLPPTPLREKASWMGKPSDPQY 103
            +RPY+GLYARSLQANG+EP   R+S+CSC+    R    S+   +R  A +R+R+P  G+PDRLEAGR+  S  RRAELLG +PPT LR K +WM KP DPQY
Sbjct:  519 LRPYHGLYARSLQANGIEPAKIRSSRCSCHTTDNRQIDGSVLWPDRENA-ARTRSPVDGLPDRLEAGRVLDSFERRAELLGKMPPTTLRAKTAWMEKPGDPQY 620
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9459.16880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJI5_ECTSI5.340e-3059.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0G8_9PHAE6.350e-2957.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9459contigH-elongata_contig9459:37..420 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9459.16880.1mRNA_H-elongata_contig9459.16880.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9459 37..420 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9459.16880.1 ID=prot_H-elongata_contig9459.16880.1|Name=mRNA_H-elongata_contig9459.16880.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
VRPYYGLYARSLQANGLEPKYFRTSQCSCNQYCRRVAGVSIAAGERGGAQ
SRSRAPTQGIPDRLEAGRIWVSLNRRAELLGTLPPTPLREKASWMGKPSD
PQY
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