prot_H-elongata_contig94572.16878.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig94572.16878.1
Unique Name	prot_H-elongata_contig94572.16878.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	141

Homology

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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: D8LU47_ECTSI (T-complex protein 1 subunit gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU47_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 1.850e-87
Identity = 134/140 (95.71%), Postives = 139/140 (99.29%), Query Frame = 0

Query:    1 MFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 140
            MFNKDVTHSKMRR+IENPR+LLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAF PDI+ITEKGVSDLAQHYLMKADITAFRRLRK+DNNRIARAVGATVV+RPDEIQESDIGTGCGLFEVRKIGDE
Sbjct:  217 MFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDE 356

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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: A0A7S2SP58_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP58_9STRA)

HSP 1 Score: 261 bits (667), Expect = 8.240e-83
Identity = 124/140 (88.57%), Postives = 138/140 (98.57%), Query Frame = 0

Query:    1 MFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 140
            MFNKDVTH+KMRR+IENPRILLLDCPLEYKKGESQTNVE+TKEEDW+TLLRMEEEYIEN+CAQIVA RPDI+ITEKGVSDLAQHYL+KA+ITAFRRLRK+DNNR+ARA GAT+V+RPDEIQESD+GTGCGLFEV+KIGDE
Sbjct:  219 MFNKDVTHAKMRRRIENPRILLLDCPLEYKKGESQTNVEITKEEDWDTLLRMEEEYIENLCAQIVAVRPDIVITEKGVSDLAQHYLLKANITAFRRLRKTDNNRVARACGATIVSRPDEIQESDVGTGCGLFEVKKIGDE 358

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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: A0A7S2FP00_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FP00_9STRA)

HSP 1 Score: 261 bits (666), Expect = 2.390e-82
Identity = 123/140 (87.86%), Postives = 138/140 (98.57%), Query Frame = 0

Query:    1 MFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 140
            MFNKDVTH+KMRR+IENPR+LLLDCPLEYKKGESQTNVE+TKEEDW+TLLRMEEEYIEN+CAQIVA +PDI+ITEKGVSDLAQHYL+KA+ITAFRRLRK+DNNR+ARA GAT+V+RPDEIQESD+GTGCGLFEVRKIGDE
Sbjct:  247 MFNKDVTHAKMRRRIENPRVLLLDCPLEYKKGESQTNVEITKEEDWDTLLRMEEEYIENMCAQIVAVKPDIVITEKGVSDLAQHYLLKANITAFRRLRKTDNNRVARATGATIVSRPDEIQESDVGTGCGLFEVRKIGDE 386

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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: A0A836CR16_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR16_9STRA)

HSP 1 Score: 260 bits (664), Expect = 3.370e-82
Identity = 124/140 (88.57%), Postives = 137/140 (97.86%), Query Frame = 0

Query:    1 MFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 140
            MFNKDVTH++MRR+IE+PRILLLDCPLEYKKGES TNVEVT+E+DWNTLLRMEEEY+ENICAQIVAF+PDI+ITEKGVSDLAQHY MKA+IT FRRLRKSDNNR+ARAVGAT+V+RPDEIQESDIGTGCGLFEVRKIGDE
Sbjct:  218 MFNKDVTHARMRRRIESPRILLLDCPLEYKKGESATNVEVTQEDDWNTLLRMEEEYVENICAQIVAFKPDIVITEKGVSDLAQHYFMKANITCFRRLRKSDNNRVARAVGATIVSRPDEIQESDIGTGCGLFEVRKIGDE 357

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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: A0A7S0XH28_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XH28_9STRA)

HSP 1 Score: 250 bits (639), Expect = 1.690e-80
Identity = 121/140 (86.43%), Postives = 132/140 (94.29%), Query Frame = 0

Query:    1 MFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 140
            MFNKDVTHSKMRR+I NPR+LLLDCPLEYKKGESQTNVE+  EED+N+LLR EEEYIEN+CA IVAF+PDI+ITEKGVSDLAQHY +KA ITAFRR+RK+DNNRIARA GATVVNRPDEIQESDIGTGCGLFEVRKIGDE
Sbjct:   52 MFNKDVTHSKMRRRIVNPRVLLLDCPLEYKKGESQTNVEIMNEEDFNSLLRQEEEYIENMCASIVAFKPDIVITEKGVSDLAQHYFLKAGITAFRRIRKTDNNRIARATGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 191

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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: W7TWK9_9STRA (T-complex protein 1 subunit gamma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWK9_9STRA)

HSP 1 Score: 254 bits (650), Expect = 3.190e-80
Identity = 122/140 (87.14%), Postives = 134/140 (95.71%), Query Frame = 0

Query:    1 MFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 140
            MFNKDVTHSKMRR+IE PRILLLDCPLEYKKGESQTNVEV +EEDWNTLLRMEEE+IE +CA+IVAFRPDI+ITEKGVSDLAQHYL+KA +TAFRR+RKSDNNRIARAVGA +V+RPDEIQE D+GTGCGLFEVRKIGDE
Sbjct:  225 MFNKDVTHSKMRRRIEKPRILLLDCPLEYKKGESQTNVEVKQEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGAVIVSRPDEIQEGDVGTGCGLFEVRKIGDE 364

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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: A0A7S2M669_9STRA (T-complex protein 1 subunit gamma (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M669_9STRA)

HSP 1 Score: 244 bits (624), Expect = 1.070e-77
Identity = 115/140 (82.14%), Postives = 132/140 (94.29%), Query Frame = 0

Query:    1 MFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 140
            MFNKDVTHSKMRR+IENPRILLLD PLEYKKGESQTNVE+T EEDWNTLL+MEEEY+EN+C +I+AF+PDI+ITEKGVSDLAQHY  KA+ITAFRRLRK+DNNR+ARA GAT+V+R DEI+E DIGTGCGLFE+RKIG+E
Sbjct:  234 MFNKDVTHSKMRRRIENPRILLLDSPLEYKKGESQTNVEITDEEDWNTLLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHYFAKANITAFRRLRKTDNNRVARATGATIVSRTDEIREEDIGTGCGLFEMRKIGEE 373

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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: M4B2C9_HYAAE (T-complex protein 1 subunit gamma n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2C9_HYAAE)

HSP 1 Score: 249 bits (635), Expect = 1.110e-77
Identity = 117/140 (83.57%), Postives = 133/140 (95.00%), Query Frame = 0

Query:    1 MFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 140
            MFNKDVTHSKMRR+IENPRILLLDCPLEYKKGESQTNVE+T ++DWNTLLR+EEEYIEN+CAQ+VA +PD++ITEKGVSDLAQHY +KA ITAFRRLRK+DNNR+ARA GAT+V+R DEIQESDIGT CGLFEVRK+GDE
Sbjct:  253 MFNKDVTHSKMRRRIENPRILLLDCPLEYKKGESQTNVELTNDQDWNTLLRLEEEYIENLCAQVVAMKPDVVITEKGVSDLAQHYFVKAGITAFRRLRKTDNNRVARATGATIVSRADEIQESDIGTKCGLFEVRKLGDE 392

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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: W2GRE9_PHYPR (T-complex protein 1 subunit gamma (Fragment) n=29 Tax=Oomycota TaxID=4762 RepID=W2GRE9_PHYPR)

HSP 1 Score: 248 bits (634), Expect = 1.640e-77
Identity = 116/140 (82.86%), Postives = 133/140 (95.00%), Query Frame = 0

Query:    1 MFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 140
            MFNKDVTHSKMRR+IENPR+LLLDCPLEYKKGESQTNVE+T ++DWNTLLR+EEEYIEN+CAQ+VA +PD++ITEKGVSDLAQHY +KA ITAFRRLRK+DNNR+ARA GAT+V+R DEIQESDIGT CGLFEVRK+GDE
Sbjct:  255 MFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVELTNDQDWNTLLRLEEEYIENLCAQVVAMKPDVVITEKGVSDLAQHYFVKAGITAFRRLRKTDNNRVARATGATIVSRADEIQESDIGTKCGLFEVRKLGDE 394

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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: A0A7S2VZH4_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZH4_9STRA)

HSP 1 Score: 246 bits (629), Expect = 7.770e-77
Identity = 116/140 (82.86%), Postives = 132/140 (94.29%), Query Frame = 0

Query:    1 MFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 140
            MFNKDVTHSKMRR+IE PRILLLDCPLEYKKGE+QTNVE+T  EDWNT+LRMEEEY+EN+C +I+AF+PDI+ITEKGVSDLAQHYL KADITAFRRLRK+DNNR+ARA GA VV+R DEIQESDIGTGCGLFE++KIG+E
Sbjct:  237 MFNKDVTHSKMRRRIEKPRILLLDCPLEYKKGETQTNVEITNTEDWNTMLRMEEEYVENMCMEIIAFQPDIVITEKGVSDLAQHYLAKADITAFRRLRKTDNNRVARATGAIVVSRTDEIQESDIGTGCGLFEMKKIGEE 376

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot

BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LU47_ECTSI	1.850e-87	95.71	T-complex protein 1 subunit gamma n=1 Tax=Ectocarp...	[more]
A0A7S2SP58_9STRA	8.240e-83	88.57	T-complex protein 1 subunit gamma n=1 Tax=Rhizochr...	[more]
A0A7S2FP00_9STRA	2.390e-82	87.86	T-complex protein 1 subunit gamma n=1 Tax=Florenci...	[more]
A0A836CR16_9STRA	3.370e-82	88.57	T-complex protein 1 subunit gamma n=1 Tax=Tribonem...	[more]
A0A7S0XH28_9STRA	1.690e-80	86.43	T-complex protein 1 subunit gamma n=1 Tax=Chromuli...	[more]
W7TWK9_9STRA	3.190e-80	87.14	T-complex protein 1 subunit gamma n=2 Tax=Monodops...	[more]
A0A7S2M669_9STRA	1.070e-77	82.14	T-complex protein 1 subunit gamma (Fragment) n=1 T...	[more]
M4B2C9_HYAAE	1.110e-77	83.57	T-complex protein 1 subunit gamma n=2 Tax=Hyaloper...	[more]
W2GRE9_PHYPR	1.640e-77	82.86	T-complex protein 1 subunit gamma (Fragment) n=29 ...	[more]
A0A7S2VZH4_9STRA	7.770e-77	82.86	T-complex protein 1 subunit gamma n=1 Tax=Eucampia...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 1..140 e-value: 1.4E-40 score: 139.4
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10		coord: 1..140 e-value: 4.9E-54 score: 184.6
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 1..140
None	No IPR available	PANTHER	PTHR11353	CHAPERONIN	coord: 1..139
None	No IPR available	PANTHER	PTHR11353:SF24	T-COMPLEX PROTEIN 1 SUBUNIT GAMMA	coord: 1..139

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig94572	contig	H-elongata_contig94572:466..2362 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig94572.16878.1	mRNA_H-elongata_contig94572.16878.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig94572 466..2377 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig94572.16878.1 ID=prot_H-elongata_contig94572.16878.1|Name=mRNA_H-elongata_contig94572.16878.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp
MFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLL
RMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKS
DNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002423	Cpn60/TCP-1
IPR027409	GroEL-like_apical_dom_sf