prot_H-elongata_contig94563.16877.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig94563.16877.1
Unique Nameprot_H-elongata_contig94563.16877.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
[Close]
BLAST of mRNA_H-elongata_contig94563.16877.1 vs. uniprot
Match: D7G288_ECTSI (D-lactate dehydrogenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G288_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 1.520e-43
Identity = 76/84 (90.48%), Postives = 80/84 (95.24%), Query Frame = 0 
Query:    1 MLKEHGLWFPLDPGPGASLGGMTSCSCSGSTAVRYGTMKDNVLSMKVVLANGEVVKTSSRAKKSAAGYDLTRLFVGSEGTLGKI 84
            MLKEHG+WFPLDPGPGASLGGM SCSCSGSTAVRYGTMKDNVLSM VVLA+G+ VKTSSRAKKS+AGYDLTRLFVGSEGTLG I
Sbjct:   82 MLKEHGMWFPLDPGPGASLGGMCSCSCSGSTAVRYGTMKDNVLSMTVVLADGQEVKTSSRAKKSSAGYDLTRLFVGSEGTLGII 165
[Close]
BLAST of mRNA_H-elongata_contig94563.16877.1 vs. uniprot
Match: A0A392M870_9FABA (D-lactate dehydrogenase (Cytochrome) mitochondrial-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392M870_9FABA)

HSP 1 Score: 132 bits (333), Expect = 5.590e-38
Identity = 63/83 (75.90%), Postives = 76/83 (91.57%), Query Frame = 0 
Query:    2 LKEHGLWFPLDPGPGASLGGMTSCSCSGSTAVRYGTMKDNVLSMKVVLANGEVVKTSSRAKKSAAGYDLTRLFVGSEGTLGKI 84
            L+ +GL+FPLDPGPGAS+GGM +  CSGS AVRYGTM+DNV+S+KVVLANG++VKT+SRA+KSAAGYDLTRL +GSEGTLG I
Sbjct:   27 LEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGVI 109
[Close]
BLAST of mRNA_H-elongata_contig94563.16877.1 vs. uniprot
Match: A0A835YUA6_9STRA (Putative d-lactate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA6_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.460e-36
Identity = 63/83 (75.90%), Postives = 74/83 (89.16%), Query Frame = 0 
Query:    2 LKEHGLWFPLDPGPGASLGGMTSCSCSGSTAVRYGTMKDNVLSMKVVLANGEVVKTSSRAKKSAAGYDLTRLFVGSEGTLGKI 84
            L++HGLWFPLDPGPGAS+GGM++C CSGSTAVRYGTM++NV+SM  VL NG+++KT  RAKKSAAGYDLTRL VGSEGTL  I
Sbjct:  157 LRDHGLWFPLDPGPGASVGGMSACRCSGSTAVRYGTMRENVVSMTAVLPNGDIIKTGGRAKKSAAGYDLTRLLVGSEGTLAVI 239
[Close]
BLAST of mRNA_H-elongata_contig94563.16877.1 vs. uniprot
Match: A0A565CIS4_9BRAS (FAD-binding PCMH-type domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565CIS4_9BRAS)

HSP 1 Score: 129 bits (325), Expect = 8.120e-36
Identity = 62/83 (74.70%), Postives = 75/83 (90.36%), Query Frame = 0 
Query:    2 LKEHGLWFPLDPGPGASLGGMTSCSCSGSTAVRYGTMKDNVLSMKVVLANGEVVKTSSRAKKSAAGYDLTRLFVGSEGTLGKI 84
            L+++GL+FPLDPGPGA+ GGM +  CSGS AVRYGTM+DNV+S+KVVL NG+VVKT+SRA+KSAAGYDLTRL +GSEGTLG I
Sbjct:  102 LEQYGLFFPLDPGPGATKGGMCATRCSGSLAVRYGTMRDNVISLKVVLPNGDVVKTASRARKSAAGYDLTRLIIGSEGTLGVI 184
[Close]
BLAST of mRNA_H-elongata_contig94563.16877.1 vs. uniprot
Match: A0A4S8II81_MUSBA (FAD-binding PCMH-type domain-containing protein n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8II81_MUSBA)

HSP 1 Score: 130 bits (328), Expect = 3.240e-35
Identity = 62/83 (74.70%), Postives = 75/83 (90.36%), Query Frame = 0 
Query:    2 LKEHGLWFPLDPGPGASLGGMTSCSCSGSTAVRYGTMKDNVLSMKVVLANGEVVKTSSRAKKSAAGYDLTRLFVGSEGTLGKI 84
            LK +GL+FPLDPGPGA++GGM +  CSGS AVRYGTM+DNV++++VVLANGEV+KT SRA+KSAAGYDLTRL +GSEGTLG I
Sbjct:  219 LKPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLQVVLANGEVIKTGSRARKSAAGYDLTRLLIGSEGTLGII 301
[Close]
BLAST of mRNA_H-elongata_contig94563.16877.1 vs. uniprot
Match: A0A1S3TQK0_VIGRR (D-lactate dehydrogenase [cytochrome], mitochondrial isoform X4 n=2 Tax=Vigna TaxID=3913 RepID=A0A1S3TQK0_VIGRR)

HSP 1 Score: 132 bits (333), Expect = 3.430e-35
Identity = 63/83 (75.90%), Postives = 76/83 (91.57%), Query Frame = 0 
Query:    2 LKEHGLWFPLDPGPGASLGGMTSCSCSGSTAVRYGTMKDNVLSMKVVLANGEVVKTSSRAKKSAAGYDLTRLFVGSEGTLGKI 84
            L+ +GL+FPLDPGPGAS+GGM +  CSGS AVRYGTM+DNV+S+KVVLANG++VKT+SRA+KSAAGYDLTRL +GSEGTLG I
Sbjct:  216 LEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGLI 298
[Close]
BLAST of mRNA_H-elongata_contig94563.16877.1 vs. uniprot
Match: UPI000D17E04B (D-lactate dehydrogenase [cytochrome], mitochondrial-like isoform X7 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=UPI000D17E04B)

HSP 1 Score: 132 bits (331), Expect = 4.430e-35
Identity = 62/84 (73.81%), Postives = 74/84 (88.10%), Query Frame = 0 
Query:    1 MLKEHGLWFPLDPGPGASLGGMTSCSCSGSTAVRYGTMKDNVLSMKVVLANGEVVKTSSRAKKSAAGYDLTRLFVGSEGTLGKI 84
             LK HGL+FPLDPGPGAS+GGM +  CSGS AVRYGTM+DNV+S+K +L NG+VVKT++RA+KSAAGYDLTRL +GSEGTLG I
Sbjct:  185 FLKPHGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKCILPNGDVVKTAARARKSAAGYDLTRLLIGSEGTLGLI 268
[Close]
BLAST of mRNA_H-elongata_contig94563.16877.1 vs. uniprot
Match: UPI001C4F1931 (D-lactate dehydrogenase [cytochrome], mitochondrial-like isoform X1 n=2 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F1931)

HSP 1 Score: 131 bits (330), Expect = 4.760e-35
Identity = 63/83 (75.90%), Postives = 75/83 (90.36%), Query Frame = 0 
Query:    2 LKEHGLWFPLDPGPGASLGGMTSCSCSGSTAVRYGTMKDNVLSMKVVLANGEVVKTSSRAKKSAAGYDLTRLFVGSEGTLGKI 84
            L+ +GL+FPLDPGPGAS+GGM +  CSGS AVRYGTM+DNV+++KVVLANG+VVKT SRA+KSAAGYDLTRL +GSEGTLG I
Sbjct:  229 LEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTGSRARKSAAGYDLTRLIIGSEGTLGVI 311
[Close]
BLAST of mRNA_H-elongata_contig94563.16877.1 vs. uniprot
Match: UPI0010A46E5B (D-lactate dehydrogenase [cytochrome], mitochondrial isoform X3 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A46E5B)

HSP 1 Score: 132 bits (333), Expect = 6.070e-35
Identity = 63/83 (75.90%), Postives = 76/83 (91.57%), Query Frame = 0 
Query:    2 LKEHGLWFPLDPGPGASLGGMTSCSCSGSTAVRYGTMKDNVLSMKVVLANGEVVKTSSRAKKSAAGYDLTRLFVGSEGTLGKI 84
            L+ +GL+FPLDPGPGAS+GGM +  CSGS AVRYGTM+DNV+S+KVVLANG++VKT+SRA+KSAAGYDLTRL +GSEGTLG I
Sbjct:  231 LEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGVI 313
[Close]
BLAST of mRNA_H-elongata_contig94563.16877.1 vs. uniprot
Match: A0A396HC45_MEDTR (Putative oxidoreductase n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A396HC45_MEDTR)

HSP 1 Score: 130 bits (328), Expect = 6.240e-35
Identity = 62/83 (74.70%), Postives = 75/83 (90.36%), Query Frame = 0 
Query:    2 LKEHGLWFPLDPGPGASLGGMTSCSCSGSTAVRYGTMKDNVLSMKVVLANGEVVKTSSRAKKSAAGYDLTRLFVGSEGTLGKI 84
            L+ +GL+FPLDPGPGAS+GGM +  CSGS AVRYGTM+DNV+S+KVV ANG++VKT+SRA+KSAAGYDLTRL +GSEGTLG I
Sbjct:  238 LEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVFANGDIVKTASRARKSAAGYDLTRLVIGSEGTLGVI 320
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94563.16877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G288_ECTSI1.520e-4390.48D-lactate dehydrogenase, putative n=1 Tax=Ectocarp... [more]
A0A392M870_9FABA5.590e-3875.90D-lactate dehydrogenase (Cytochrome) mitochondrial... [more]
A0A835YUA6_9STRA1.460e-3675.90Putative d-lactate dehydrogenase n=1 Tax=Tribonema... [more]
A0A565CIS4_9BRAS8.120e-3674.70FAD-binding PCMH-type domain-containing protein n=... [more]
A0A4S8II81_MUSBA3.240e-3574.70FAD-binding PCMH-type domain-containing protein n=... [more]
A0A1S3TQK0_VIGRR3.430e-3575.90D-lactate dehydrogenase [cytochrome], mitochondria... [more]
UPI000D17E04B4.430e-3573.81D-lactate dehydrogenase [cytochrome], mitochondria... [more]
UPI001C4F19314.760e-3575.90D-lactate dehydrogenase [cytochrome], mitochondria... [more]
UPI0010A46E5B6.070e-3575.90D-lactate dehydrogenase [cytochrome], mitochondria... [more]
A0A396HC45_MEDTR6.240e-3574.70Putative oxidoreductase n=1 Tax=Medicago truncatul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006094FAD linked oxidase, N-terminalPFAMPF01565FAD_binding_4coord: 2..58
e-value: 5.3E-13
score: 48.9
IPR016169FAD-binding, type PCMH, subdomain 2GENE3D3.30.465.10coord: 1..84
e-value: 2.0E-31
score: 110.5
NoneNo IPR availablePANTHERPTHR11748:SF111D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATEDcoord: 2..82
NoneNo IPR availablePANTHERPTHR11748D-LACTATE DEHYDROGENASEcoord: 2..82
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..25
score: 5.0
IPR016166FAD-binding domain, PCMH-typePROSITEPS51387FAD_PCMHcoord: 1..84
score: 10.655
IPR036318FAD-binding, type PCMH-like superfamilySUPERFAMILY56176FAD-binding/transporter-associated domain-likecoord: 2..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94563contigH-elongata_contig94563:310..1143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94563.16877.1mRNA_H-elongata_contig94563.16877.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig94563 289..1143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig94563.16877.1 ID=prot_H-elongata_contig94563.16877.1|Name=mRNA_H-elongata_contig94563.16877.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
MLKEHGLWFPLDPGPGASLGGMTSCSCSGSTAVRYGTMKDNVLSMKVVLA
NGEVVKTSSRAKKSAAGYDLTRLFVGSEGTLGKI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006094Oxid_FAD_bind_N
IPR016169FAD-bd_PCMH_sub2
IPR016166FAD-bd_PCMH
IPR036318FAD-bd_PCMH-like_sf