prot_H-elongata_contig94486.16871.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig94486.16871.1
Unique Nameprot_H-elongata_contig94486.16871.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length90
Homology
BLAST of mRNA_H-elongata_contig94486.16871.1 vs. uniprot
Match: D8LE02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE02_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 1.260e-46
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0
Query:    1 QHRRDLKLVVTSATLDAQRFSDFFGGVPVYNIPGRTFNVEKYFAKTPQEDYVDAAVKQALQIHLSSPPGDILIFMTGQEDIETTCEVMMQ 90
            + RRDLKLVVTSATLDA+RFSDFFGGVPVYNIPGRTF+VEKYF+KTPQEDYVDAAVKQALQIHLS PPGDILIFMTGQEDIETTCEV+ +
Sbjct:  936 EKRRDLKLVVTSATLDAKRFSDFFGGVPVYNIPGRTFHVEKYFSKTPQEDYVDAAVKQALQIHLSHPPGDILIFMTGQEDIETTCEVIAE 1025          
BLAST of mRNA_H-elongata_contig94486.16871.1 vs. uniprot
Match: A0A835ZC27_9STRA (Asp-Glu-Ala-His box polypeptide 38, isoform CRA_d n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC27_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.720e-43
Identity = 77/90 (85.56%), Postives = 82/90 (91.11%), Query Frame = 0
Query:    1 QHRRDLKLVVTSATLDAQRFSDFFGGVPVYNIPGRTFNVEKYFAKTPQEDYVDAAVKQALQIHLSSPPGDILIFMTGQEDIETTCEVMMQ 90
            Q RRDL+LVVTSATLDA RFSDFFGGVPV+NIPGRTF V+ YFAKTPQEDYVDAAVKQALQIHLS  PGDILIFMTGQEDIE TCEV+ +
Sbjct:  333 QRRRDLRLVVTSATLDATRFSDFFGGVPVFNIPGRTFKVDTYFAKTPQEDYVDAAVKQALQIHLSHGPGDILIFMTGQEDIEATCEVLAE 422          
BLAST of mRNA_H-elongata_contig94486.16871.1 vs. uniprot
Match: A0A7S1CGU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CGU9_9STRA)

HSP 1 Score: 138 bits (348), Expect = 4.490e-40
Identity = 64/90 (71.11%), Postives = 76/90 (84.44%), Query Frame = 0
Query:    1 QHRRDLKLVVTSATLDAQRFSDFFGGVPVYNIPGRTFNVEKYFAKTPQEDYVDAAVKQALQIHLSSPPGDILIFMTGQEDIETTCEVMMQ 90
            Q RRDLKL+VTSAT+DA++F+ FFGGVP Y IPGRTF VE + AK+  +DYVDAAVKQ + IHLS PPGDIL+FMTGQEDIET CEV+ +
Sbjct:   50 QRRRDLKLIVTSATMDAEKFATFFGGVPTYTIPGRTFKVETFHAKSVFDDYVDAAVKQVMTIHLSFPPGDILVFMTGQEDIETVCEVLAE 139          
BLAST of mRNA_H-elongata_contig94486.16871.1 vs. uniprot
Match: A0A7S3LB55_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LB55_9STRA)

HSP 1 Score: 137 bits (344), Expect = 7.830e-40
Identity = 67/88 (76.14%), Postives = 75/88 (85.23%), Query Frame = 0
Query:    3 RRDLKLVVTSATLDAQRFSDFFGGVPVYNIPGRTFNVEKYFAKTPQEDYVDAAVKQALQIHLSSPPGDILIFMTGQEDIETTCEVMMQ 90
            R DLKL+VTSATL A  FSD+FGGVPV+ IPGRTF VE YFAK+ QEDYV AAVKQ LQIH +SPPGDILIFMTGQEDIE TC+V+ +
Sbjct:    8 RFDLKLIVTSATLSADIFSDYFGGVPVFRIPGRTFPVETYFAKSVQEDYVMAAVKQTLQIHFNSPPGDILIFMTGQEDIEGTCQVIAE 95          
BLAST of mRNA_H-elongata_contig94486.16871.1 vs. uniprot
Match: A0A7S2R770_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R770_9STRA)

HSP 1 Score: 147 bits (370), Expect = 8.600e-40
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 0
Query:    1 QHRRDLKLVVTSATLDAQRFSDFFGGVPVYNIPGRTFNVEKYFAKTPQEDYVDAAVKQALQIHLSSPPGDILIFMTGQEDIETTCEVMMQ 90
            Q RRDLKL+VTSAT++A+RFS+FFGGVPV++IPGRTF VEK  +KTPQEDYV+AAVKQ L IH+  PPGDIL+FMTGQEDIETTCE++ +
Sbjct:   73 QRRRDLKLIVTSATMNAERFSEFFGGVPVFHIPGRTFPVEKLHSKTPQEDYVEAAVKQVLAIHMQYPPGDILVFMTGQEDIETTCEILAE 162          
BLAST of mRNA_H-elongata_contig94486.16871.1 vs. uniprot
Match: A0A482UL54_9ARCH (ATP-dependent RNA helicase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UL54_9ARCH)

HSP 1 Score: 144 bits (363), Expect = 9.200e-40
Identity = 66/88 (75.00%), Postives = 80/88 (90.91%), Query Frame = 0
Query:    3 RRDLKLVVTSATLDAQRFSDFFGGVPVYNIPGRTFNVEKYFAKTPQEDYVDAAVKQALQIHLSSPPGDILIFMTGQEDIETTCEVMMQ 90
            RRDLKL+VTSAT+DA+RFS+FFGGVPV++IPGRTF VEK++A++  +DYVDAAVKQ L IHLS PPGD+L+FMTGQEDIE TCEV+ Q
Sbjct:  238 RRDLKLIVTSATMDAERFSNFFGGVPVFHIPGRTFPVEKHYARSVPDDYVDAAVKQVLAIHLSMPPGDVLVFMTGQEDIEATCEVLAQ 325          
BLAST of mRNA_H-elongata_contig94486.16871.1 vs. uniprot
Match: A0A4D9DB89_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DB89_9STRA)

HSP 1 Score: 149 bits (375), Expect = 9.640e-40
Identity = 71/90 (78.89%), Postives = 80/90 (88.89%), Query Frame = 0
Query:    1 QHRRDLKLVVTSATLDAQRFSDFFGGVPVYNIPGRTFNVEKYFAKTPQEDYVDAAVKQALQIHLSSPPGDILIFMTGQEDIETTCEVMMQ 90
            Q RRDLKL+VTSATLD++RFSDFFGGVPV+ IPGRTF VE+ +AKT  EDYVDAAVKQAL IHLS PPGDIL+FMTGQEDIET CEV+ +
Sbjct:  899 QRRRDLKLIVTSATLDSKRFSDFFGGVPVFEIPGRTFPVERVYAKTSVEDYVDAAVKQALAIHLSHPPGDILVFMTGQEDIETVCEVIAE 988          
BLAST of mRNA_H-elongata_contig94486.16871.1 vs. uniprot
Match: A0A482RQU9_9ARCH (ATP-dependent RNA helicase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RQU9_9ARCH)

HSP 1 Score: 137 bits (346), Expect = 1.710e-38
Identity = 64/88 (72.73%), Postives = 78/88 (88.64%), Query Frame = 0
Query:    3 RRDLKLVVTSATLDAQRFSDFFGGVPVYNIPGRTFNVEKYFAKTPQEDYVDAAVKQALQIHLSSPPGDILIFMTGQEDIETTCEVMMQ 90
            RRDLKL+VTSATL+A++FS FFGGVPV+ IPGRTF VEK+FAK+P EDY++AAVKQ L IHLS P GDIL+FMTGQEDIE+ CE++ +
Sbjct:   82 RRDLKLIVTSATLNAEKFSAFFGGVPVFTIPGRTFPVEKFFAKSPPEDYLEAAVKQVLTIHLSYPVGDILVFMTGQEDIESCCEIIAE 169          
BLAST of mRNA_H-elongata_contig94486.16871.1 vs. uniprot
Match: A0A425D8Z6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425D8Z6_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.260e-38
Identity = 62/90 (68.89%), Postives = 75/90 (83.33%), Query Frame = 0
Query:    1 QHRRDLKLVVTSATLDAQRFSDFFGGVPVYNIPGRTFNVEKYFAKTPQEDYVDAAVKQALQIHLSSPPGDILIFMTGQEDIETTCEVMMQ 90
            Q RRD KL+VTSATLDA++F+ FFGGVP++ IPGRTF V+  +AK+P EDYVDAAVKQ + IHLS P GDIL+FMTGQEDIE TC V+ +
Sbjct:   63 QRRRDFKLIVTSATLDAEKFASFFGGVPLFTIPGRTFKVDTMYAKSPAEDYVDAAVKQVMTIHLSHPKGDILVFMTGQEDIEATCYVLAE 152          
BLAST of mRNA_H-elongata_contig94486.16871.1 vs. uniprot
Match: A0A7S1YN02_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YN02_9STRA)

HSP 1 Score: 138 bits (348), Expect = 5.450e-38
Identity = 68/88 (77.27%), Postives = 74/88 (84.09%), Query Frame = 0
Query:    3 RRDLKLVVTSATLDAQRFSDFFGGVPVYNIPGRTFNVEKYFAKTPQEDYVDAAVKQALQIHLSSPPGDILIFMTGQEDIETTCEVMMQ 90
            R DLKL+VTSATL A  FS FFGGVPV+ IPGRTF VE YFAK  QEDYV AAVKQA+QIH +SPPGDILIFMTGQEDIE TC+V+ Q
Sbjct:   99 RSDLKLIVTSATLSADTFSSFFGGVPVFRIPGRTFPVETYFAKGVQEDYVMAAVKQAIQIHFNSPPGDILIFMTGQEDIEGTCQVLAQ 186          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94486.16871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE02_ECTSI1.260e-4690.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZC27_9STRA2.720e-4385.56Asp-Glu-Ala-His box polypeptide 38, isoform CRA_d ... [more]
A0A7S1CGU9_9STRA4.490e-4071.11Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3LB55_9STRA7.830e-4076.14Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S2R770_9STRA8.600e-4074.44Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A482UL54_9ARCH9.200e-4075.00ATP-dependent RNA helicase (Fragment) n=1 Tax=arch... [more]
A0A4D9DB89_9STRA9.640e-4078.89Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A482RQU9_9ARCH1.710e-3872.73ATP-dependent RNA helicase (Fragment) n=1 Tax=arch... [more]
A0A425D8Z6_9STRA2.260e-3868.89Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A7S1YN02_9STRA5.450e-3877.27Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..35
e-value: 1.5E-9
score: 39.4
NoneNo IPR availableGENE3D3.40.50.300coord: 36..90
e-value: 3.7E-15
score: 57.8
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 2..88
NoneNo IPR availablePANTHERPTHR18934:SF120coord: 2..88
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94486contigH-elongata_contig94486:79..1676 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94486.16871.1mRNA_H-elongata_contig94486.16871.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig94486 79..1676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig94486.16871.1 ID=prot_H-elongata_contig94486.16871.1|Name=mRNA_H-elongata_contig94486.16871.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
QHRRDLKLVVTSATLDAQRFSDFFGGVPVYNIPGRTFNVEKYFAKTPQED
YVDAAVKQALQIHLSSPPGDILIFMTGQEDIETTCEVMMQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase