prot_H-elongata_contig93929.16829.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig93929.16829.1
Unique Nameprot_H-elongata_contig93929.16829.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
[Close]
BLAST of mRNA_H-elongata_contig93929.16829.1 vs. uniprot
Match: A0A6H5KAV0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAV0_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 3.800e-12
Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 0 
Query:    1 YYWSFFTLIIDLIIARFVFRFARILNSLTPAEIEQLRNPSAVWSANYRRQ-----PFQML 55
            Y+W  F   + L IAR ++RFA++L++L+PAEIEQLRNP+AVWS  YRRQ     PFQ L
Sbjct:  176 YFWFIFLFALSLYIARVIWRFAKVLDTLSPAEIEQLRNPTAVWSGQYRRQHQNQQPFQSL 235
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93929.16829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KAV0_9PHAE3.800e-1256.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig93929contigH-elongata_contig93929:2017..2435 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig93929.16829.1mRNA_H-elongata_contig93929.16829.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig93929 2017..2435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig93929.16829.1 ID=prot_H-elongata_contig93929.16829.1|Name=mRNA_H-elongata_contig93929.16829.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
YYWSFFTLIIDLIIARFVFRFARILNSLTPAEIEQLRNPSAVWSANYRRQ
PFQML*
back to top