prot_H-elongata_contig93868.16823.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig93868.16823.1
Unique Nameprot_H-elongata_contig93868.16823.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
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BLAST of mRNA_H-elongata_contig93868.16823.1 vs. uniprot
Match: D7G086_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G086_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 2.740e-38
Identity = 68/80 (85.00%), Postives = 74/80 (92.50%), Query Frame = 0 
Query:    1 QAYDPRDHLPPVIVIDGLLGRIRPGEDAPAAVEAVLRWCWTITGGRRLAHVVMTAPQSMAVDGSLVRMKTFLNDGRPSPG 80
            QA DPR+HLPPVIV+DGLLGRIR GED PAAVEAVLRWCWTITGGRRLAHVV+ APQS+AVDGSLVR+K FLNDGR +PG
Sbjct:  139 QADDPRNHLPPVIVMDGLLGRIREGEDVPAAVEAVLRWCWTITGGRRLAHVVLIAPQSLAVDGSLVRVKGFLNDGRLAPG 218
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BLAST of mRNA_H-elongata_contig93868.16823.1 vs. uniprot
Match: A0A6H5JKL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL7_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 9.480e-38
Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 0 
Query:    1 QAYDPRDHLPPVIVIDGLLGRIRPGEDAPAAVEAVLRWCWTITGGRRLAHVVMTAPQSMAVDGSLVRMKTFLNDGRPSPG 80
            QA DPR+HLPPVIV+DGLLG IR GED PAAVEAVLRWCWTITGGRRLAHVV+ APQS+AVDGSLVR+K FLNDGR +PG
Sbjct:  153 QAEDPRNHLPPVIVMDGLLGHIREGEDVPAAVEAVLRWCWTITGGRRLAHVVLIAPQSLAVDGSLVRVKGFLNDGRLAPG 232
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93868.16823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G086_ECTSI2.740e-3885.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKL7_9PHAE9.480e-3883.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig93868contigH-elongata_contig93868:374..1836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig93868.16823.1mRNA_H-elongata_contig93868.16823.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig93868 374..1836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig93868.16823.1 ID=prot_H-elongata_contig93868.16823.1|Name=mRNA_H-elongata_contig93868.16823.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
QAYDPRDHLPPVIVIDGLLGRIRPGEDAPAAVEAVLRWCWTITGGRRLAH
VVMTAPQSMAVDGSLVRMKTFLNDGRPSPG*
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