prot_H-elongata_contig938.16816.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig938.16816.1
Unique Nameprot_H-elongata_contig938.16816.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length284
Homology
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 1.980e-62
Identity = 153/234 (65.38%), Postives = 169/234 (72.22%), Query Frame = 0
Query:   51 EGRKYVTGSFVVPFIFDLGNSLEDAIDDLNELPPSLDAEVNTARVAVMTCEEAVKIAVENRKEEKYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMAAAQAVGDAPTQQLGKGTDSSTTSLITNSARVELKAFQTSIGVKIYELDNEGTKMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHSWKIVEE 284
            EGR+   G F    +      L  A+D   ++   +D E   A V  +  EEAVKIAVE R  E  Q        XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    AQAVG A T QL +G DSS   LIT+S RVEL AF+ S G+K+YE D EG K+Y+DPLDWWRVRC DFPHLANLARRVLAIPATQAESE LFSCAGNI+TKNRNNLAPTTV+LLVLLRHSWKIVEE
Sbjct:   66 EGRRRQPGGFKPVQV------LATALDPRTKILYGVD-EDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEE 292          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.190e-28
Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0
Query:  224 TDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHSWKIVEE 284
            TDFPHLANLARRVLAIPATQA+SE LFSCAGNI+TKNRNNLAPTTV+LLVLLRHSWKIVEE
Sbjct:  152 TDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEE 212          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.550e-16
Identity = 124/374 (33.16%), Postives = 175/374 (46.79%), Query Frame = 0
Query:    2 VARLLELKVAIDKHEAADNLDPLLSAADWTILELILPILEPFRHTQTLLEGRKYVTGSFVVPFIFDLGNSLEDAIDDLNELPPSLDAEVNTARVAVMTC-----------------------------------------------------------------EEAVKIAVENRKEEKYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFM---------AAAQAVGDAPT-----------------------QQLGKGTDSSTTSLITNSARVELKAFQTSIGVKIYELDNEGTKMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHS 278
            + RL+ L+  I +HE  D+  PLL   DW +L+L+  +L+PF   Q  LE  K VT   V P+I DL + L++A++ L       ++ V  A+  V+ C                                                                  EAVK+A+E +  E   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           A++  +   P                        QQ    + S     + +    E+ AF+ + G+ +   + +G ++   PL+WWRV+  ++P LA+LARRVL IPA QA+SE +FS AG ++TK R  + P  V L+V LR++
Sbjct:  171 ICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAV-SWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRNT 543          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 7.660e-16
Identity = 43/100 (43.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query:  188 VELKAFQTSIGVKIYELDNEGT---KMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHSWKIVEE 284
            +E+ AF+ + G++++++    T   K++ +PLD WR +  ++P LA LARRVLAIP++QA+SE +FS AG  +T  R+ L    V+LLV LR+ W +V+E
Sbjct:  453 MEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDE 552          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 1.240e-13
Identity = 43/93 (46.24%), Postives = 56/93 (60.22%), Query Frame = 0
Query:  155 FMAAAQAVGDAPTQQLGKGTDSSTTSLITNSARVELKAFQTSIGVKIYELDNEGTKMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESE 247
            F AAA A   A     G  T       + +   +E+ +FQT+ G+ I+    +G K+Y DPLDWWR R  +FPHLA LARRVLAIP++QA SE
Sbjct:  455 FEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSE 547          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A2D4C1W9_PYTIN (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1W9_PYTIN)

HSP 1 Score: 77.4 bits (189), Expect = 6.020e-13
Identity = 40/83 (48.19%), Postives = 48/83 (57.83%), Query Frame = 0
Query:  198 GVKIYELDNEGTKMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHSWK 280
            G ++   D       I PLDWWR R  DFPH+A LARR L+  AT   SE  FS AGN+IT  R +L P  V+ LV L H+ K
Sbjct:  185 GQQVTAEDLNAAVFNIKPLDWWRDRANDFPHVARLARRWLSCVATSVLSERAFSTAGNVITAKRGSLRPELVRDLVFLAHNAK 267          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: UPI0011C102C8 (zinc finger BED domain-containing protein 1-like n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C102C8)

HSP 1 Score: 77.0 bits (188), Expect = 1.010e-12
Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 0
Query:  184 NSARVELKAFQTSIGVKIYELDNEGTKMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHS 278
            ++  VE+K++  S+     E+D E      +PL+WWR+  T+FP LANLA++ + IPAT A SE  FS  GNI+T +R+ L P TV  LV L ++
Sbjct:  200 DAIEVEIKSYLQSV-----EVDAEA-----NPLEWWRLHQTNFPRLANLAKKYICIPATSAPSERAFSTGGNIVTCHRSALKPETVDKLVFLANN 284          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A1X7SR93_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SR93_AMPQE)

HSP 1 Score: 70.9 bits (172), Expect = 1.210e-11
Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 0
Query:  214 DPLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLL 275
            D  +WWR     FPHL+++AR++L IPAT   SE +FS AG I+TK R NL P  V +LV L
Sbjct:   67 DVFEWWRKNQEMFPHLSDIARKLLCIPATSVPSERIFSVAGGIVTKKRTNLKPENVDMLVFL 128          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: UPI001C19DB61 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C19DB61)

HSP 1 Score: 73.2 bits (178), Expect = 1.540e-11
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 0
Query:  215 PLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHSWKIV 282
            P  WW  + + FP L+ LA++ LAIPAT A SE LFS AGN++T  R NL+PTT + L+  + +W ++
Sbjct:  178 PFKWWASQESQFPILSQLAKKYLAIPATSAASERLFSDAGNVMTVKRTNLSPTTFEHLIFCKRNWHLI 245          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: UPI001C1CE2AD (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1CE2AD)

HSP 1 Score: 72.4 bits (176), Expect = 2.340e-11
Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = 0
Query:  175 DSSTTSLITNSARVELKAFQTSIGVKIYELDNEGTKMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHSWK 280
            D +  S I+   R+E      SIG     L  +  +   + L WW++   ++PHLAN+A+  L +PAT A SE +FS A N+IT +R +LAP TV+ ++ L+H ++
Sbjct:  132 DENLVSHISKQQRIE------SIGELDRYLKADRAQPLTNVLKWWKLHEEEYPHLANMAKDYLGVPATSASSERIFSSAANVITYDRASLAPETVRSVMYLKHWYR 231          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWI1_9PHAE1.980e-6265.38Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JPB0_9PHAE1.190e-2893.44Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE1.550e-1633.16Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
D8LCS5_ECTSI7.660e-1643.00Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE1.240e-1346.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2D4C1W9_PYTIN6.020e-1348.19Dimer_Tnp_hAT domain-containing protein n=1 Tax=Py... [more]
UPI0011C102C81.010e-1243.16zinc finger BED domain-containing protein 1-like n... [more]
A0A1X7SR93_AMPQE1.210e-1151.61Dimer_Tnp_hAT domain-containing protein n=1 Tax=Am... [more]
UPI001C19DB611.540e-1147.06Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
UPI001C1CE2AD2.340e-1136.79Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 211..276
e-value: 5.0E-17
score: 61.5
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 1..268
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig938contigH-elongata_contig938:13366..14412 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig938.16816.1mRNA_H-elongata_contig938.16816.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig938 12868..14412 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig938.16816.1 ID=prot_H-elongata_contig938.16816.1|Name=mRNA_H-elongata_contig938.16816.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=284bp
MVARLLELKVAIDKHEAADNLDPLLSAADWTILELILPILEPFRHTQTLL
EGRKYVTGSFVVPFIFDLGNSLEDAIDDLNELPPSLDAEVNTARVAVMTC
EEAVKIAVENRKEEKYQAASSQQRPEAVAATASSTSSAGEEDTSRKRRCR
GGGGFMAAAQAVGDAPTQQLGKGTDSSTTSLITNSARVELKAFQTSIGVK
IYELDNEGTKMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESECLF
SCAGNIITKNRNNLAPTTVKLLVLLRHSWKIVEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf