prot_H-elongata_contig93122.16762.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig93122.16762.1
Unique Nameprot_H-elongata_contig93122.16762.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length163
Homology
BLAST of mRNA_H-elongata_contig93122.16762.1 vs. uniprot
Match: A0A6H5KC60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC60_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 5.870e-17
Identity = 42/138 (30.43%), Postives = 85/138 (61.59%), Query Frame = 0
Query:   27 NLASTLQANHIGMFKIPLKNVTCTSHVRQVNERGVKTVLESIEKKGWLDHCAPAVVIEREAL-EGGEFTEKSALGHDFQVLDGNHRITAAKRLWGGDHLVSCRVYYALPASVTKIVAD--RECAINLLHLSVFGCLYF 161
            ++++ L  +++G FK+ L N+TCT  VR +++ G++ +  SI++ GW++  AP+VVI+R+ L +  E T ++AL      LDGNHR+T  K+++G   +   RVY     +  +++A+   +   +++  +++  +YF
Sbjct:    8 DMSAVLSKHYLGEFKMRLCNITCTEMVRPLSQNGLQHLERSIQEVGWIESFAPSVVIQRDHLGDSRELTAEAALTAPAHTLDGNHRVTTLKKMYGESGVFLVRVYLEFNQADERLIANALNDATESVVQPTLYDKVYF 145          
BLAST of mRNA_H-elongata_contig93122.16762.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 3.360e-16
Identity = 41/138 (29.71%), Postives = 84/138 (60.87%), Query Frame = 0
Query:   27 NLASTLQANHIGMFKIPLKNVTCTSHVRQVNERGVKTVLESIEKKGWLDHCAPAVVIEREAL-EGGEFTEKSALGHDFQVLDGNHRITAAKRLWGGDHLVSCRVYYALPASVTKIVAD--RECAINLLHLSVFGCLYF 161
            ++++ L  +++G F + L N+TCT  VR +++ G++ +  SI++ GW++  AP+VVI+R+ L +  E T ++AL      LDGNHR+T  K+++G   +   RVY     +  +++A+   +   +++  +++  +YF
Sbjct:    8 DMSAVLSKHYLGEFMMRLCNITCTEMVRPLSQNGLQHLERSIQEVGWIESFAPSVVIQRDHLGDSRELTAEAALTAPAHTLDGNHRVTTLKKMYGESGVFLVRVYLEFNQADERLIANALNDATQSVVQRTLYDKVYF 145          
BLAST of mRNA_H-elongata_contig93122.16762.1 vs. uniprot
Match: A0A6H5JK41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK41_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 3.060e-13
Identity = 41/123 (33.33%), Postives = 64/123 (52.03%), Query Frame = 0
Query:   26 INLASTLQANHIGMFKIPLKNVTCTSHVRQVNERGVKTVLESIEKKGWLDHCAPAVVIEREALEGGEFTEKSALGHDFQVLDGNHRITAAKRLWGGD--HLVSCRVYYALPASVTKIVADREC 146
            +++AS L+   +G+++IPL N+  T H RQ +   V  ++ SI + GW+    P V +  E  +G   T + A      VLDGNHR+ AAK ++GGD    + C  Y  +    TK +    C
Sbjct:   42 VHVASVLKDLELGVWEIPLANIRFTEHCRQRSPAAVTAIVASITEMGWMPTAVPQVTLP-EVQKGQVMTAELAATMTAYVLDGNHRLLAAKEVYGGDLKKTIKCACYRDITCPYTKKIVSDAC 163          
BLAST of mRNA_H-elongata_contig93122.16762.1 vs. uniprot
Match: A0A6H5KN26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN26_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.330e-9
Identity = 40/127 (31.50%), Postives = 70/127 (55.12%), Query Frame = 0
Query:   39 MFKIPLKNVTCTSHVRQVNERGVKTVLESIEKKGWLDHCAPAVVIEREALEGGEFTEKSA-LGHDFQVLDGNHRITAAKRLWGGDHLVSCRVYYALP-ASVTKIVAD--RECAINLLHLSVFGCLYF 161
            M  I L+ +  TSH RQ++++ VK + +SI+ + ++++   +V+ +   +    FT++ A       VLDGNHR+ A K +  GD LV C+ Y  +  A+V +IVAD   +        +++  LYF
Sbjct:    1 MHYIALERLINTSHARQISQKSVKLLQQSIQSQDFMENQPLSVIFK--GVHQAPFTQEDADKAGPASVLDGNHRLVALKAVKPGDFLVPCQCYSDIKDANVKRIVADACNDATSTFAERTIYDRLYF 125          
BLAST of mRNA_H-elongata_contig93122.16762.1 vs. uniprot
Match: D7G124_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G124_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 4.930e-7
Identity = 39/134 (29.10%), Postives = 64/134 (47.76%), Query Frame = 0
Query:   32 LQANHIGMFKIPLKNVTCTSHVRQVNERGVKTVLESIEKKGWLDHCAPAVVIEREALEGGEF-TEKSALGHDFQVLDGNHRITAAKRLWGGDHLVSCRVYYALP-ASVTKIVAD--RECAINLLHLSVFGCLYF 161
            L+   +GM  I L+ +  TSH RQ+++R VK + +SI+ + +++H  PA   + +      F T         Q L       A K +  GD LV C+ Y  +  A+V +IVAD   +        +++  LYF
Sbjct:   66 LKERSLGMHYILLERLINTSHARQISQRSVKLLQQSIQSQDFMEHGEPAAFCDIQRGSSSAFHTRGCRQSRARQRLGREPSFVAPKAVMPGDFLVPCQCYSDIKDANVKRIVADACNDATSTFAERTIYDRLYF 199          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93122.16762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KC60_9PHAE5.870e-1730.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LBJ9_9PHAE3.360e-1629.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK41_9PHAE3.060e-1333.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN26_9PHAE2.330e-931.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G124_ECTSI4.930e-729.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036086ParB/Sulfiredoxin superfamilySUPERFAMILY110849ParB/Sulfiredoxincoord: 27..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig93122contigH-elongata_contig93122:871..1359 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig93122.16762.1mRNA_H-elongata_contig93122.16762.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig93122 759..1517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig93122.16762.1 ID=prot_H-elongata_contig93122.16762.1|Name=mRNA_H-elongata_contig93122.16762.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp
MAQSSVSQTSTLSAGSTVVMETSPKINLASTLQANHIGMFKIPLKNVTCT
SHVRQVNERGVKTVLESIEKKGWLDHCAPAVVIEREALEGGEFTEKSALG
HDFQVLDGNHRITAAKRLWGGDHLVSCRVYYALPASVTKIVADRECAINL
LHLSVFGCLYFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036086ParB/Sulfiredoxin_sf