prot_H-elongata_contig93109.16761.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig93109.16761.1
Unique Nameprot_H-elongata_contig93109.16761.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig93109.16761.1 vs. uniprot
Match: A0A6H5L567_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L567_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 1.250e-29
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 0
Query:    1 MINSCEDRHAAWTALGDTFVIKDPETFADEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNI 60
            MIN+CED HAAWTA GDTFVIKDP+TFA+EVIPRFFKHNKFSSFVRQLNFYGFRKVKSNI
Sbjct:   32 MINTCEDVHAAWTAAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNI 91          
BLAST of mRNA_H-elongata_contig93109.16761.1 vs. uniprot
Match: A0A835YK43_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK43_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 7.460e-23
Identity = 45/58 (77.59%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    1 MINSCEDRHAAWTALGDTFVIKDPETFADEVIPRFFKHNKFSSFVRQLNFYGFRKVKS 58
            MINSC+   A W+A GDTFVIKDP+ FA EVIP FFKH+KFSSFVRQLNFYGFRKVK+
Sbjct:   36 MINSCDQTLAGWSAKGDTFVIKDPDRFAAEVIPTFFKHSKFSSFVRQLNFYGFRKVKA 93          
BLAST of mRNA_H-elongata_contig93109.16761.1 vs. uniprot
Match: A0A836CRK9_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRK9_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 8.360e-21
Identity = 43/58 (74.14%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    1 MINSCEDRHAAWTALGDTFVIKDPETFADEVIPRFFKHNKFSSFVRQLNFYGFRKVKS 58
            MIN+C+   A+W+A GDTF+IK PE FA EVIP FFKH+KF+SFVRQLNFYGFRKVKS
Sbjct:   33 MINTCDTSLASWSARGDTFIIKSPERFAAEVIPTFFKHSKFASFVRQLNFYGFRKVKS 90          
BLAST of mRNA_H-elongata_contig93109.16761.1 vs. uniprot
Match: A0A7S2UPP7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPP7_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 4.100e-20
Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 MINSCEDRHAAWTALGDTFVIKDPETFADEVIPRFFKHNKFSSFVRQLNFYGFRKVKSN 59
            MI++C+ + A W   G+TFV+KDPE FA E+IP+FFKHN FSSFVRQLNFYGFRK+KS+
Sbjct:   61 MIDTCDPKVAGWAEDGNTFVVKDPEIFASEIIPQFFKHNNFSSFVRQLNFYGFRKIKSD 119          
BLAST of mRNA_H-elongata_contig93109.16761.1 vs. uniprot
Match: A0A7S1GQW1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQW1_CYCTE)

HSP 1 Score: 89.0 bits (219), Expect = 1.330e-19
Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 MINSCEDRHAAWTALGDTFVIKDPETFADEVIPRFFKHNKFSSFVRQLNFYGFRKVKSN 59
            MI++C+   A W+  G TFV+KDPE FA E+IP+FFKHN FSSFVRQLNFYGFRK+KS+
Sbjct:   59 MIDTCDTAIATWSEDGTTFVVKDPEKFAAEIIPQFFKHNNFSSFVRQLNFYGFRKIKSD 117          
BLAST of mRNA_H-elongata_contig93109.16761.1 vs. uniprot
Match: A0A7S4K047_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K047_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.630e-19
Identity = 39/59 (66.10%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 MINSCEDRHAAWTALGDTFVIKDPETFADEVIPRFFKHNKFSSFVRQLNFYGFRKVKSN 59
            MI++C+   A+W+  GDTFV+KD E FA ++IP+FFKHN FSSFVRQLNFYGFRK+KS+
Sbjct:   61 MIDTCDPAIASWSEEGDTFVVKDTEKFASDIIPQFFKHNNFSSFVRQLNFYGFRKIKSD 119          
BLAST of mRNA_H-elongata_contig93109.16761.1 vs. uniprot
Match: A0A7S0TDF3_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0TDF3_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.960e-19
Identity = 38/59 (64.41%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 MINSCEDRHAAWTALGDTFVIKDPETFADEVIPRFFKHNKFSSFVRQLNFYGFRKVKSN 59
            MI+SC+   A W++ G TF++KDPE FA ++IP+FFKHN FSSFVRQLNFYGFRK+K++
Sbjct:   23 MIDSCDPTIATWSSDGRTFLVKDPEVFASDIIPQFFKHNNFSSFVRQLNFYGFRKIKND 81          
BLAST of mRNA_H-elongata_contig93109.16761.1 vs. uniprot
Match: B5Y546_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y546_PHATC)

HSP 1 Score: 87.8 bits (216), Expect = 7.100e-19
Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 0
Query:    1 MINSCEDRHAAWTALGDTFVIKDPETFADEVIPRFFKHNKFSSFVRQLNFYGFRKVKSN 59
            MI+SC+   AAW+  G TFV+KD E FA EVIP FFKHN FSSFVRQLNFYGFRK+KS+
Sbjct:   76 MIDSCDPYVAAWSDDGYTFVVKDTEKFASEVIPEFFKHNNFSSFVRQLNFYGFRKIKSD 134          
BLAST of mRNA_H-elongata_contig93109.16761.1 vs. uniprot
Match: W7U925_9STRA (Winged helix-turn-helix transcription repressor n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U925_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.090e-18
Identity = 38/60 (63.33%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    1 MINSCEDRHAAWTALGDTFVIKDPETFADEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNI 60
            M+ SC    AAW+  GD+F+IKDP++FA  VIP++F HN FSSFVRQLNFYGFRKVK ++
Sbjct:   90 MLESCSPSIAAWSGKGDSFLIKDPDSFAQTVIPQYFSHNNFSSFVRQLNFYGFRKVKQDV 149          
BLAST of mRNA_H-elongata_contig93109.16761.1 vs. uniprot
Match: A0A6S8RFZ1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8RFZ1_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.110e-18
Identity = 39/59 (66.10%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 MINSCEDRHAAWTALGDTFVIKDPETFADEVIPRFFKHNKFSSFVRQLNFYGFRKVKSN 59
            MI+SC+   A W+  G TFV+KDP+ FA +VIP+FFKHN FSSFVRQLNFYGFRK+K++
Sbjct:  126 MIDSCDASIATWSEDGSTFVVKDPDIFAKQVIPQFFKHNNFSSFVRQLNFYGFRKIKND 184          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93109.16761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L567_9PHAE1.250e-2991.67HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc... [more]
A0A835YK43_9STRA7.460e-2377.59HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A836CRK9_9STRA8.360e-2174.14HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A7S2UPP7_9STRA4.100e-2067.80Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1GQW1_CYCTE1.330e-1967.80Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S4K047_9STRA2.630e-1966.10Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S0TDF3_9STRA3.960e-1964.41Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
B5Y546_PHATC7.100e-1971.19Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
W7U925_9STRA1.090e-1863.33Winged helix-turn-helix transcription repressor n=... [more]
A0A6S8RFZ1_9STRA1.110e-1866.10Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000232Heat shock factor (HSF)-type, DNA-bindingPRINTSPR00056HSFDOMAINcoord: 31..43
score: 55.6
coord: 44..56
score: 83.74
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 6..61
e-value: 9.3E-6
score: 27.0
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 7..58
e-value: 5.8E-19
score: 68.5
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..61
e-value: 7.8E-22
score: 79.1
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 1..57
NoneNo IPR availablePANTHERPTHR10015:SF306coord: 1..57
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 7..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig93109contigH-elongata_contig93109:1112..2014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig93109.16761.1mRNA_H-elongata_contig93109.16761.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig93109 1085..2014 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig93109.16761.1 ID=prot_H-elongata_contig93109.16761.1|Name=mRNA_H-elongata_contig93109.16761.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
MINSCEDRHAAWTALGDTFVIKDPETFADEVIPRFFKHNKFSSFVRQLNF
YGFRKVKSNIA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR036388WH-like_DNA-bd_sf
IPR027725HSF_fam
IPR036390WH_DNA-bd_sf