prot_H-elongata_contig9305.16758.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9305.16758.1
Unique Nameprot_H-elongata_contig9305.16758.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length220
Homology
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: D7FS66_ECTSI (Putative cyclin A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS66_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 3.060e-121
Identity = 179/217 (82.49%), Postives = 194/217 (89.40%), Query Frame = 0
Query:    1 QFLLDPHPL-QVVELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARERSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFFGEE 216
            QF L    L Q V+LIDRSL+AFEVPR KLQLLGCACVVLASKYEEI+APTAEELAHISDNTYTRAEII+MEL VVN LQFRLTC+TPCNF +RFC AA+S ARERSLV YLLELLLQDY GV+LLPSLKAAAALYLARQTLHP+GCPREAWT+QTE+YT Y+AR LEPCVRRLH LH+RAEGNNLHAVRDKYKK  +HRVAE TCALE+ L FGEE
Sbjct:  120 QFKLSSRTLFQAVDLIDRSLSAFEVPRGKLQLLGCACVVLASKYEEIYAPTAEELAHISDNTYTRAEIIAMELVVVNALQFRLTCITPCNFQDRFCLAAKSNARERSLVSYLLELLLQDYQGVSLLPSLKAAAALYLARQTLHPRGCPREAWTRQTEHYTGYAARELEPCVRRLHYLHVRAEGNNLHAVRDKYKKSALHRVAEVTCALEDYLHFGEE 336          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: A0A6H5L2E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E4_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 2.090e-115
Identity = 177/217 (81.57%), Postives = 192/217 (88.48%), Query Frame = 0
Query:    1 QFLLDPHPL-QVVELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARERSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFFGEE 216
            QF L    L Q V+LIDRSL+AFEVPR KLQLLGCACVVLASKYEEI+APTAEELAHISDNTYTRAEII+MEL VVN LQFRLT +TPCNF +RFC AA+S ARERSLV YLLELLLQDY GV+LLPSLKAAAALYLARQTLHP+GCPREAWT+QTE+YT Y+AR LEPCVRRLH LH+RAEGNNLHAVRDKYKK  +HRVAE TCALE+ L FG E
Sbjct:  360 QFKLSSRTLFQAVDLIDRSLSAFEVPRGKLQLLGCACVVLASKYEEIYAPTAEELAHISDNTYTRAEIIAMELVVVNALQFRLTSITPCNFQDRFCLAAKSNARERSLVSYLLELLLQDYQGVSLLPSLKAAAALYLARQTLHPRGCPREAWTRQTEHYTGYAARELEPCVRRLHYLHVRAEGNNLHAVRDKYKKSALHRVAEVTCALEDYLHFGGE 576          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: A0A835YJW4_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJW4_9STRA)

HSP 1 Score: 186 bits (471), Expect = 7.060e-53
Identity = 105/214 (49.07%), Postives = 136/214 (63.55%), Query Frame = 0
Query:    1 QFLLDPH-PLQVVELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARERSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFF 213
            +F L P  P  V+EL+DRSL+AF V R  LQLLGCAC+++A+K+EE   P+   L +ISD+ YT ++++ ME +V+  L F ++CVTP +F   F  AA   AR+  L  YLLEL L DY  V+LLPS KAAAA  LAR T+   G    AW+     +T YSA  LEPCVRR+  LH  AE + LHA+RD+Y K + HRVA   C  E  L F
Sbjct:  264 EFRLQPGTPFLVIELLDRSLSAFCVNRDNLQLLGCACLLVAAKFEEEHPPSVNSLVYISDSAYTISDMVRMEGQVLQHLNFAVSCVTPHHFAAEFSAAAGCNARQGYLCLYLLELALLDYSLVSLLPSHKAAAAALLARMTMRRGG---GAWSALARQFTGYSAATLEPCVRRMRVLHESAENSKLHAIRDRYCKQERHRVALVCCLKESELVF 474          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: A0A836CJX2_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX2_9STRA)

HSP 1 Score: 156 bits (394), Expect = 8.480e-43
Identity = 92/203 (45.32%), Postives = 124/203 (61.08%), Query Frame = 0
Query:   12 VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARERSLVGYLLELLLQDYFGV-TLLPSLKAAAALYLARQTLHPKGCPRE--AWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENL 211
            VEL+DRSLTA    R  LQ L CAC++LA+K+EE  AP++  LA ISDN ++RA ++  E +V+  L+FR++C TP  +   +C AA   AR+  L  Y+LEL L DY  V T +PSL+AAAA +LAR T+          AW      ++ Y A  LE C RR+HALH  AE   L AVR+K+ +P   RVA   CA + +L
Sbjct:   86 VELLDRSLTALCTARCDLQRLACACLLLAAKHEEEQAPSSSALACISDNAFSRAGVLRTEAQVLVALEFRVSCATPYQYAALYCAAAGCDARQARLCLYILELSLLDYTLVHTYVPSLRAAAAAFLARATMCTSAAAAAGAAWPPTAARFSGYGAAQLEACARRMHALHEGAEDALLRAVREKHARPGALRVAALCCASDAHL 288          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: A0A817B2C1_BRANA ((rape) hypothetical protein n=1 Tax=Brassica napus TaxID=3708 RepID=A0A817B2C1_BRANA)

HSP 1 Score: 147 bits (371), Expect = 6.330e-40
Identity = 91/220 (41.36%), Postives = 126/220 (57.27%), Query Frame = 0
Query:   12 VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARE-----RSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFFGEE-------PCV 219
            V  +DR L+A  + R +LQL+G + +++ASKYEEI  P  E+  +I+DNT+TR +++SME  ++  LQF L C T   F+ RF R A+    E       L  YL EL L DY  V  LPSL A++A++LAR  + PK  P   W +  E YT+Y A  L+ CV  +H L+L   GN L AVR+KYK+ +   VA    + E  L F E+       PCV
Sbjct:   66 VSYVDRFLSAKPIHRQRLQLVGVSAMLIASKYEEISPPKVEDFVYITDNTFTRQDVVSMEADILLALQFELGCPTIKTFLRRFTRVAQEDFNESLLQIEFLCCYLSELSLLDYTCVKFLPSLLASSAVFLARFIIRPKQHP---WNQMLEEYTKYKASDLQQCVGIIHDLYLSRRGNVLEAVRNKYKQHKFKCVATLPVSPELPLAFFEDVTIRDLKPCV 282          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: M4FHY1_BRARP (Cyclin N-terminal domain-containing protein n=13 Tax=Brassiceae TaxID=981071 RepID=M4FHY1_BRARP)

HSP 1 Score: 147 bits (371), Expect = 4.570e-39
Identity = 91/220 (41.36%), Postives = 126/220 (57.27%), Query Frame = 0
Query:   12 VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARE-----RSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFFGEE-------PCV 219
            V  +DR L+A  + R +LQL+G + +++ASKYEEI  P  E+  +I+DNT+TR +++SME  ++  LQF L C T   F+ RF R A+    E       L  YL EL L DY  V  LPSL A++A++LAR  + PK  P   W +  E YT+Y A  L+ CV  +H L+L   GN L AVR+KYK+ +   VA    + E  L F E+       PCV
Sbjct:  152 VSYVDRFLSAKPIHRQRLQLVGVSAMLIASKYEEISPPKVEDFVYITDNTFTRQDVVSMEADILLALQFELGCPTIKTFLRRFTRVAQEDFNESLLQIEFLCCYLSELSLLDYTCVKFLPSLLASSAVFLARFIIRPKQHP---WNQMLEEYTKYKASDLQQCVGIIHDLYLSRRGNVLEAVRNKYKQHKFKCVATMPVSPELPLAFFEDVTIRDLKPCV 368          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: CCA21_ARATH (Cyclin-A2-1 n=7 Tax=Arabidopsis thaliana TaxID=3702 RepID=CCA21_ARATH)

HSP 1 Score: 148 bits (374), Expect = 6.460e-39
Identity = 87/208 (41.83%), Postives = 118/208 (56.73%), Query Frame = 0
Query:   12 VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARE-----RSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFFG 214
            V LIDR ++   + + KLQLLG  C+++ASKYEEI AP  EE   I+DNTYTR E++SME+KV+N L FRL+  T   F+ RF RAA++  +        L  Y  EL L +Y  +  LPSL AA+A++LAR TL     P   W +  ++YT Y   AL+  V  +  L L   G+ L A+  KY + +  RVA  T     N  F 
Sbjct:  238 VNLIDRFMSHNYIEKQKLQLLGITCMLIASKYEEISAPRLEEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTFLRRFIRAAQASDKVPLIEMEYLANYFAELTLTEYTFLRFLPSLIAASAVFLARWTLDQSNHP---WNQTLQHYTRYETSALKNTVLAMEELQLNTSGSTLIAIHTKYNQQKFKRVATLTSPERVNTLFS 442          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: G7JBQ1_MEDTR (B-like cyclin n=1 Tax=Medicago truncatula TaxID=3880 RepID=G7JBQ1_MEDTR)

HSP 1 Score: 148 bits (374), Expect = 1.140e-38
Identity = 90/221 (40.72%), Postives = 132/221 (59.73%), Query Frame = 0
Query:    1 QFLLDPHPLQV-VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSK-----ARERSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFFGE 215
            ++ L P  L + V LIDR L+   + + +LQLLG  C+ +ASKYEE+ AP  EE   I+DNTYT+ E++ ME +V+N L+F+L+  T   F+ RF +AA+S      A    L  YL EL L +Y  +  LPS  AA+A++LAR TL+    P   WT   E++T Y A  L+P V  L  L L  +G +LHA+R+KYK  + + VA+ +    ++LF  +
Sbjct:  260 EYKLVPDTLYLTVNLIDRFLSTSLIQKHRLQLLGVTCMFIASKYEEMCAPRVEEFCFITDNTYTKEEVVKMEKEVLNLLRFQLSVPTTKTFIRRFIQAAQSSYKVPLAELEFLANYLAELTLVEYSFLQFLPSRVAASAVFLARWTLNHSEHP---WTTTLEHFTNYKASELKPVVLALEDLQLNTKGCSLHAIREKYKHEKFNGVAKLSPKPVQSLFQAQ 477          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: A0A843VSF0_COLES (Cyclin N-terminal domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VSF0_COLES)

HSP 1 Score: 147 bits (371), Expect = 1.460e-38
Identity = 82/207 (39.61%), Postives = 126/207 (60.87%), Query Frame = 0
Query:   12 VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARERSLV-----GYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFF 213
            V  IDR L++  + R KLQLLG +C+++ASKYEEI  P  E+  +I+DNTYT+ E++ ME  ++  L+F +   T   F+ RF RA +  ++ +SL       YL EL + DY  +  +PS+ AA+A++++R TL+P   P   WTK  ++YT Y   AL+ CV  +H + L  +G++L A+RDKYK+   H+ +   C     LFF
Sbjct:  191 VSYIDRFLSSNAINRQKLQLLGVSCMLIASKYEEISPPHVEDFCYITDNTYTKEEVVKMESDILRFLKFEMGNPTIKTFLRRFVRAGQDDSKSQSLQLEFLSNYLAELSMLDYGCIRFIPSVIAASAVFMSRFTLNPNAHP---WTKTLQHYTGYKPSALKDCVHAIHDIQLNRKGSSLVAIRDKYKQ---HKASLWLCLSSFMLFF 391          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: A0A6P5XT47_DURZI (cyclin-A2-2 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5XT47_DURZI)

HSP 1 Score: 148 bits (374), Expect = 1.590e-38
Identity = 91/210 (43.33%), Postives = 127/210 (60.48%), Query Frame = 0
Query:    1 QFLLDPHPLQV-VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARE-----RSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEAT 204
            ++ L P  L + V LIDR L+   + + +LQLLG AC+++ASKYEEI AP  EE   I+DNTYTR E++ ME KV+N L F+L+  T   F+ RF +AA++  +        L  YL EL L DY  +  LPSL AA+A++LAR+TL+    P   W    E+YT Y A  L+  V  +  L L   G +L+A+R+KYK+P+   VA  T
Sbjct:  284 EYKLVPDTLYLTVSLIDRFLSHNFIEKQRLQLLGVACMLIASKYEEICAPRVEEFCFITDNTYTRGEVLKMESKVLNFLYFQLSVPTTKTFLRRFIQAAQATYKVPCIELEFLANYLAELTLLDYNFLKFLPSLIAASAVFLARRTLNQSDHP---WNPTLEHYTSYKASELKTTVLAMEDLQLNTNGCSLNAIREKYKQPKFKCVATMT 490          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS66_ECTSI3.060e-12182.49Putative cyclin A n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5L2E4_9PHAE2.090e-11581.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJW4_9STRA7.060e-5349.07Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A836CJX2_9STRA8.480e-4345.32Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A817B2C1_BRANA6.330e-4041.36(rape) hypothetical protein n=1 Tax=Brassica napus... [more]
M4FHY1_BRARP4.570e-3941.36Cyclin N-terminal domain-containing protein n=13 T... [more]
CCA21_ARATH6.460e-3941.83Cyclin-A2-1 n=7 Tax=Arabidopsis thaliana TaxID=370... [more]
G7JBQ1_MEDTR1.140e-3840.72B-like cyclin n=1 Tax=Medicago truncatula TaxID=38... [more]
A0A843VSF0_COLES1.460e-3839.61Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A6P5XT47_DURZI1.590e-3843.33cyclin-A2-2 n=1 Tax=Durio zibethinus TaxID=66656 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 85..206
e-value: 6.9E-27
score: 105.3
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 85..203
e-value: 1.3E-26
score: 93.0
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 89..175
e-value: 1.6E-4
score: 31.0
coord: 1..76
e-value: 3.4E-8
score: 43.2
NoneNo IPR availableGENE3D1.10.472.10coord: 84..201
e-value: 8.7E-61
score: 207.2
NoneNo IPR availableGENE3D1.10.472.10coord: 12..83
e-value: 8.7E-61
score: 207.2
NoneNo IPR availablePANTHERPTHR10177:SF212CYCLIN-A2-1coord: 12..203
IPR039361CyclinPIRSFPIRSF001771Cyclin_A_B_D_Ecoord: 7..211
e-value: 1.5E-62
score: 210.2
IPR039361CyclinPANTHERPTHR10177CYCLINEcoord: 12..203
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 12..82
e-value: 2.2E-20
score: 72.7
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 86..203
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 12..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9305contigH-elongata_contig9305:8789..9448 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9305.16758.1mRNA_H-elongata_contig9305.16758.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9305 8789..9448 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9305.16758.1 ID=prot_H-elongata_contig9305.16758.1|Name=mRNA_H-elongata_contig9305.16758.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=220bp
QFLLDPHPLQVVELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPT
AEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARS
KARERSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREA
WTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRV
AEATCALEENLFFGEEPCV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004367Cyclin_C-dom
IPR013763Cyclin-like
IPR039361Cyclin
IPR006671Cyclin_N
IPR036915Cyclin-like_sf