prot_H-elongata_contig9297.16745.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9297.16745.1
Unique Nameprot_H-elongata_contig9297.16745.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length112
Homology
BLAST of mRNA_H-elongata_contig9297.16745.1 vs. uniprot
Match: A0A6H5KVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD9_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 9.310e-28
Identity = 74/120 (61.67%), Postives = 83/120 (69.17%), Query Frame = 0
Query:    1 MARTEELQRKLEEAGESNRIITQAVRLKQDEVDQLSVVNNAINRRLKEKDPAAAIFGEERPEVDMASGGGDYEDGEGNGGSGGD------------TRDIGSVRANAGRGVFYVESRPTQ 108
            M RTEELQRKLEEAGESNRIITQAVRLKQDE+DQLSV+N+AINR+LK KDPA   F E+RPEVD              G +G D             RDI +VRA+AGRGVFYVES+P Q
Sbjct:  579 MVRTEELQRKLEEAGESNRIITQAVRLKQDELDQLSVINSAINRQLKAKDPALGNF-EDRPEVD--------------GETGADXXXXXXXXXXXXARDIAAVRASAGRGVFYVESKPAQ 683          
BLAST of mRNA_H-elongata_contig9297.16745.1 vs. uniprot
Match: A0A7S2RQ17_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQ17_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.160e-14
Identity = 49/105 (46.67%), Postives = 66/105 (62.86%), Query Frame = 0
Query:    3 RTEELQRKLEEAGESNRIITQAVRLKQDEVDQLSVVNNAINRRLKEKDPAAAIFGEERPEVDMASGGGDYEDGEGNGGSGGDTRDIGSVRANAGRGVFYVESRPT 107
            R EELQRK++E GESNR+ITQA+RLKQDEV++L+V  +A+ +  +E+D A A       +   A G G   DGEG         D  ++RA  GRG FY ES+P+
Sbjct:   42 RCEELQRKVDETGESNRVITQAMRLKQDEVEELTVKLDAMQKMRREQDDAVASA----EQHSGAGGEGPEVDGEG---------DADAIRAAGGRGRFYTESKPS 133          
BLAST of mRNA_H-elongata_contig9297.16745.1 vs. uniprot
Match: A0A482T2T7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2T7_9ARCH)

HSP 1 Score: 58.2 bits (139), Expect = 1.640e-7
Identity = 45/108 (41.67%), Postives = 55/108 (50.93%), Query Frame = 0
Query:    5 EELQRKLEEAGESNRIITQAVRLKQDEVDQLSV-VNNAINRRLKEKDPAAAIFGEERPEVDMASGGGDYEDGEGNGGSGGDTRDIGSVRANAGRGVFYVESRPTQASS 111
            EELQ KL E GESNRIITQAVRLKQ+E++ L V   NA+      +   A + G +    + A  G    D            DI  VR N GRG FYVE++     S
Sbjct:  409 EELQSKLTEMGESNRIITQAVRLKQEEINNLDVKYKNAMQELGSREKELAQLHGNQIQPSENADDGNPRPD------------DIEHVRMNEGRGRFYVEAKSVGGGS 504          
BLAST of mRNA_H-elongata_contig9297.16745.1 vs. uniprot
Match: D8LFA2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA2_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 1.740e-5
Identity = 38/80 (47.50%), Postives = 44/80 (55.00%), Query Frame = 0
Query:   41 AINRRLKEKDPAAAIFGEERPEVDMASGGGDYEDGEGNGGSGGD------------TRDIGSVRANAGRGVFYVESRPTQ 108
            AINR+LK KDPA   F E+RPEVD              G +G D             RDI +VRA+AGRGVFYVES+P Q
Sbjct:  524 AINRQLKAKDPALGNF-EDRPEVD--------------GETGTDXXXXXXXXXXXXARDIAAVRASAGRGVFYVESKPAQ 588          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9297.16745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KVD9_9PHAE9.310e-2861.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RQ17_9STRA2.160e-1446.67Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A482T2T7_9ARCH1.640e-741.67Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
D8LFA2_ECTSI1.740e-547.50Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9297contigH-elongata_contig9297:6668..7298 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9297.16745.1mRNA_H-elongata_contig9297.16745.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9297 6668..7313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9297.16745.1 ID=prot_H-elongata_contig9297.16745.1|Name=mRNA_H-elongata_contig9297.16745.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bp
MARTEELQRKLEEAGESNRIITQAVRLKQDEVDQLSVVNNAINRRLKEKD
PAAAIFGEERPEVDMASGGGDYEDGEGNGGSGGDTRDIGSVRANAGRGVF
YVESRPTQASS*
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