prot_H-elongata_contig92802.16732.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig92802.16732.1
Unique Nameprot_H-elongata_contig92802.16732.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length38
Homology
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BLAST of mRNA_H-elongata_contig92802.16732.1 vs. uniprot
Match: A0A0V0GG49_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0GG49_SOLCH)

HSP 1 Score: 72.0 bits (175), Expect = 4.580e-16
Identity = 32/37 (86.49%), Postives = 34/37 (91.89%), Query Frame = 0 
Query:    1 TKWRSELTHVEKLADELWLGVEMPIEFGASWFSPKCV 37
            TKWRSE T+VEKLADE+WLG EMPIE GASWFSPKCV
Sbjct:    4 TKWRSEPTNVEKLADEVWLGGEMPIEPGASWFSPKCV 40
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig92802.16732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0V0GG49_SOLCH4.580e-1686.49Putative ovule protein (Fragment) n=1 Tax=Solanum ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig92802contigH-elongata_contig92802:743..856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig92802.16732.1mRNA_H-elongata_contig92802.16732.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig92802 743..856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig92802.16732.1 ID=prot_H-elongata_contig92802.16732.1|Name=mRNA_H-elongata_contig92802.16732.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=38bp
TKWRSELTHVEKLADELWLGVEMPIEFGASWFSPKCV*
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