prot_H-elongata_contig9254.16708.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9254.16708.1
Unique Nameprot_H-elongata_contig9254.16708.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length269
Homology
BLAST of mRNA_H-elongata_contig9254.16708.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 2.220e-89
Identity = 140/264 (53.03%), Postives = 181/264 (68.56%), Query Frame = 0
Query:    1 MDMQVNVRTTGPLPEDFPDRQYVTGVSILQNGHSFIIEVIEPYSGN-TPGCPDDT-FPCLVDGGLRFIVDGEESKALLSPTRNENVAGTFAVSSSNLPIECREFGGGEEWELVYEEMRRGDRELAEPSFEEWVLDFPHMVAPDWCAKYVSEIGLADVQSKHSVLRITTPDMTVRFSIGVNHRYAGKIDRFGRELPELDFWQSSVGLSGINLENEHLTGILGETARPVRDTDGHVITKGIKAIRGTVADYRVSGPTSKDFALLHK 262
            MD++VNVR T PLP+DFPDRQ VTG+S++  GHS ++EV  PYS +   GCPD +  PCL +GGL   VDGE++  L+ P R E + G   VS+ NLP++C +FGG + W   YE +    R+L   SFE+WVL F  M A DWC +Y+SE GL  VQS H++ +I TP + VR ++G+ H+   ++D  GR LP+LD WQ  VGL+G++LENE LTGILGETARPV D DGH +  G  A RGT  DYRVSGP   DFALLH+
Sbjct:  433 MDLRVNVRLTAPLPDDFPDRQLVTGLSVISEGHSLVLEVTNPYSTDLNDGCPDGSPTPCLANGGLSVTVDGEKNVGLIHPIRGEILPGGIEVSADNLPVQCWQFGGHKIWARHYEAIL-ARRKLRAQSFEDWVLSFTDMAAHDWCTEYISEKGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMAGDDAYRGTPEDYRVSGPLGMDFALLHQ 695          
BLAST of mRNA_H-elongata_contig9254.16708.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 7.190e-87
Identity = 131/263 (49.81%), Postives = 183/263 (69.58%), Query Frame = 0
Query:    1 MDMQVNVRTTGPLPEDFPDRQYVTGVSILQNGHSFIIEVIEPYSGNTPGCPDDTFPCLVDGGLRFIVDGEESKALLSPTRNENVA-GTFAVSSSNLPIECREFGGGEEWELVYEEMRRGDREL-AEPSFEEWVLDFPH-MVAPDWCAKYVSEIGLADVQSKHSVLRITTPDMTVRFSIGVNHRYAGKIDRFGRELPELDFWQSSVGLSGINLENEHLTGILGETARPVRDTDGHVITKGIKAIRGTVADYRVSGPTSKDFALL 260
            +D+ +NVR T PLP++FPDRQ +T +++L  GHS +IEV  PY+  T GCP+   PCL +GGLR IVD ++   LL  +R+  VA G   VSSSNLP+EC++FGG   W  +Y++M  G REL  + S EEW+L + H M AP WCAKY++E  LAD+QS H++ +I TP +TVR + GVN++  G+++  GR LP+L+FWQ  VG+ G++++N  L+G+LGETARPV D +G V+ +G  A RGT+ DYRVS      F LL
Sbjct:  143 IDININVRLTAPLPDEFPDRQLMTSLAVLSKGHSVVIEVENPYTVVTNGCPEGVSPCLANGGLRIIVDSQQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQDMIEGRRELHGDESLEEWILKYDHGMAAPGWCAKYIAENDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHFPLL 405          
BLAST of mRNA_H-elongata_contig9254.16708.1 vs. uniprot
Match: A0A6H5JP35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP35_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 1.050e-85
Identity = 134/268 (50.00%), Postives = 178/268 (66.42%), Query Frame = 0
Query:    1 MDMQVNVRTTGPLPEDFPDRQYVTGVSILQNGHSFIIEVIEPYSGNTPG-CPDDT-FPCLVDGGLRFIVDGE---ESKALLSPTRNENVAGTFAVSSSNLPIECREFGGGEEWELVYEE-MRRGDRELAEPSFEEWVLDFPHMVAPDWCAKYVSEIGLADVQSKHSVLRITTPDMTVRFSIGVNHRYAGKIDRFGRELPELDFWQSSVGLSGINLENEHLTGILGETARPVRDTDGHVITKGIKAIRGTVADYRVSGPTSKDFALLHK 262
            +D+ VNVR T P PE+FPDRQ VTG+S++  GHS +IEV +PY  +T G CPD    PCL +GGL  IVDGE   +   LL   R+E + G   VS++NLP++C +FGG +     Y   +  G R L   +FEEWVL F HM A DWC +Y++   L+DVQS  ++ +I TP++ VRF++G+ H+  G ++  GR +P+LD W+  VGL+G++LENE LTGILGETARPV D  G  + KG KA RGT  DYRVSG    DFALL +
Sbjct:   84 IDLNVNVRLTAPPPEEFPDRQLVTGLSVMAGGHSLVIEVTKPYDTDTAGGCPDGAPAPCLANGGLSVIVDGEKEADDSPLLHTIRDETLPGGIQVSAANLPVQCWQFGGDKISARHYANTIMEGRRHLLSETFEEWVLSFQHMAAHDWCTEYIAHKDLSDVQSAQAIYQIITPEVVVRFNVGIGHQTGGHVEMDGRIVPDLDVWEMDVGLAGLSLENETLTGILGETARPVLDEHGRAVMKGNKAYRGTPEDYRVSGALGTDFALLRQ 351          
BLAST of mRNA_H-elongata_contig9254.16708.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 7.730e-82
Identity = 126/262 (48.09%), Postives = 179/262 (68.32%), Query Frame = 0
Query:    2 DMQVNVRTTGPLPEDFPDRQYVTGVSILQNGHSFIIEVIEPYSGNTPGCPDDTFPCLVDGGLRFIVDGEESKALLSPTRNENVA-GTFAVSSSNLPIECREFGGGEEWELVYEEMRRGDREL-AEPSFEEWVLDFP-HMVAPDWCAKYVSEIGLADVQSKHSVLRITTPDMTVRFSIGVNHRYAGKIDRFGRELPELDFWQSSVGLSGINLENEHLTGILGETARPVRDTDGHVITKGIKAIRGTVADYRVSGPTSKDFALL 260
            D+ +NVR T PLP++FPDRQ +T ++I+  G+S +IEV  PY+  T GCP+   PCL +GGLR IVDG+E   LL  +R   VA GT  +S+SNLP+ECR+FGG   W  +Y+++    R+L    S EEW+L +  +M A  WCAKY++E  LAD+Q+ H++ +I TP +TVR + GVN++  G+++  GR LP+L+FWQ  VG+ G++++N  L+G+LGETARPV   +G  + +G  A RGTV DYRVS      FALL
Sbjct:   45 DLSINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVENPYTIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVADGTMTMSASNLPVECRQFGGHRIWARMYQDILEDRRQLRGGESLEEWILRYDQNMPARRWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHFALL 306          
BLAST of mRNA_H-elongata_contig9254.16708.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.510e-67
Identity = 112/264 (42.42%), Postives = 164/264 (62.12%), Query Frame = 0
Query:    2 DMQVNVRTTGPLPEDFPDRQYVTGVSILQNGHSFIIEVIEPYSGNTPGCPDDTFPCLVDGGLRFIVDGEESKALLSPTRNENVAGTFAVSSSNLPIECREFGGGEEWELVYEEMRRGDREL-AEPSFEEWVLDFP-HMVAPDWCAKYVSEIGLADVQSKHSVLRITTPDMTVRFSIGVNHRYAGKIDRFGRELPELDFWQSSVGLSGINLENEHLTGILGETARPVRDTDGHVITKGIKAIRGTVADYRVSGPTSKDFALLHKS 263
            D+ +NVR T PLP++FPDRQ +T ++I+  G+S +IEV  PY+ +T GCP+D  PC  +GGLR IVDG E   LL  +R              +P      GG   W  +Y+++  G R+L    S EEW+L +  +M A  WCAKY++E  LAD+Q+ H++ +I TP +TVR + GVN++  G+++  GR LP+L+FWQ  VG+ G++++   L+G+ GETA PV D +G  + +G  A RG V DYRVS      FALL ++
Sbjct:   50 DLHINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVKNPYTTDTGGCPEDVSPCHANGGLRIIVDGHEVDELLRFSRQ-------------MP------GGKRIWARMYQDILEGRRQLRGGESLEEWILRYDQNMPARTWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGIDGLDVDKPALSGLFGETACPVYDENGKAVMEGYDAFRGAVEDYRVSSALGVHFALLDET 294          
BLAST of mRNA_H-elongata_contig9254.16708.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 3.180e-62
Identity = 119/272 (43.75%), Postives = 157/272 (57.72%), Query Frame = 0
Query:    2 DMQVNVRTTGPLPEDFPDRQYVTGVSILQ-NGHSFIIEVIEPYSGNTPGCPDDTFPCLVDGGLRFIVDGEESKALLSPTRNENV-AGTFAVSSSNLPIECREFGGGEEWELVYEEMR--RGDREL-AEPSFEEWVLDFPHMVAPDWCAKYVSE---IGLADVQSKHSVLRITTPDMTVRFSIGVNHRYAG-KIDRFGRELPELDFWQSSVGLSGINLENEHLTGILGETARPVRDTDGHVITKGIKAIRGTVADYRVSGPTSKDFALLHKSV 264
            + QVN R T P+P++FP RQ V+GVSI    G S ++EV  P +  T GC   + PCL +G LR +VDG+ES AL SP  N  +  G   VSS+NLP ECR FGG   W   +  M    G R L     F +WVL+   M AP WCA +  E    GL+ VQS  ++LR+ T  +TVR  +GVN++ +    D     +PELDFWQ+ +    +    E L G+LG+TAR V D DG  IT G++A+RG V   RVSGP   DF  +H +V
Sbjct:   38 EFQVNARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNPITTETEGCSSTSAPCLAEGALRILVDGDESHALQSPVENLVLPGGDLVVSSANLPAECRPFGGDRIWAAQFAAMNDASGRRSLRGHTPFADWVLEADTMAAPGWCALFAREQRLSGLSSVQSNRAILRVETGGVTVRVDVGVNYQDSVLSSDGNAVLVPELDFWQTDIAFEELRPSGE-LGGMLGDTARYVIDDDGKPITSGMEALRGPVETCRVSGPLGVDFEQMHGAV 308          
BLAST of mRNA_H-elongata_contig9254.16708.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 7.800e-32
Identity = 87/245 (35.51%), Postives = 135/245 (55.10%), Query Frame = 0
Query:    3 MQVNVRTTGPLPEDFPDRQYVTGVSIL-QNGHSFIIEVIEPYSGNTPGCPDD-----TFPCLVDGGLRFIVDGEESKALLSPTRNENVAGTFAVSSSNLPIECREFGGGEEW-EL-VYEEMRRGDREL--AEPSFEEWVLDFPHMVAPDWCAKYVSEIG-----LADVQSKHSVLRITTPDMTVRFSIGVNHRYAGKIDRFGRELPELDFWQSSVGLSGINLENEHLTGILGETARPVRDTDGHV 232
            +Q+N+R T  LP  FP+RQ VTGV+++ + GH+   ++++P     P C        + PCLV+GGLR  VDG E    L      +  G   +++ NLP+EC+ FG    W +L V + +R G R L  AE  F+ W++    M+AP WC KY+ E+      LA ++S H+VLRI TP++++R ++G+N      +   GR +P   FWQ  V +       EH  G+   TA+ + +T G+V
Sbjct:  275 LQMNLRVTSHLPATFPERQLVTGVALVTEGGHTITADIVDPLD-LAPTCHGTVDAVGSAPCLVNGGLRITVDGREQ---LQGAGEYDFDGDIHITAVNLPLECQRFGDYMMWGDLDVEQRLRGGSRSLRSAETVFD-WLVADSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTEREQTLQD-GRVVPTASFWQMDVRV-------EHAEGMA--TAKGMLETYGYV 504          
BLAST of mRNA_H-elongata_contig9254.16708.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 2.110e-30
Identity = 84/225 (37.33%), Postives = 117/225 (52.00%), Query Frame = 0
Query:   33 HSFIIEVIEPYSGNTPGCPDDTFPCLVDGGLRFIVDGEESKALLSPTRNENVAGTFAVSSSNLPIECREFGGGEEWELVYEEMRRGDREL-AEPSFEEWVLDFPHMVAPDWCAKYVS-----EIGLADVQSKHSVLRITTPDMTVRFSIGVNHRYAGKIDRFGRELPELDFWQSSVGLSGINLENEHLTGILGETARPVRDTDGHVITKGIKAIRGTVADYRVSG 251
            HS +IEV EP+S ++  CP    PCL DG LR ++DG+E+   L      ++     +S+ NLP  CR FG  + WE    E   G R+L  +PS  EW+L  P     D C +YV+     E G+   QS+H+  +I TP  TVR S G  H+ A +      +LP+   WQ ++ +   N  +    GILGET  P RD  G  I  G++AIRGT  D +  G
Sbjct:   85 HSIVIEVAEPHSLDS-SCPAGVSPCLADGALRVLLDGDEA---LFAHGTVSLGLGVEISAVNLPGACRSFGFEKYWEHKKLEYATGGRQLRTQPSMGEWILGDPTATNMDECVEYVARAEAEEGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDH-NQVSYAAKGILGETFVPTRDASGKPIMTGMEAIRGTEEDCKCGG 304          
BLAST of mRNA_H-elongata_contig9254.16708.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 2.250e-29
Identity = 95/273 (34.80%), Postives = 136/273 (49.82%), Query Frame = 0
Query:    3 MQVNVRTTGPLPEDFPDRQYVTGVSILQNG-----HSFIIEVIEPYSGNTPGCPDDTFPCLVDGGLRFIVDGEESKALLSPTRNENVAGTFAVSSSNLPIECREFGGGEEWELV-YEEMRRGDREL-AEPSFEEWVLDFPHMVAPDWCAKYVSEIGLADV-------QSKHSVLRITTPDMTVRFSIGVNHRYAGKIDRFGRELPELDFWQSSVGL--SGINLENEHLTGILGETARPVRDTDGHVITKGIKAIRGTVADYRVSGPTSKDFAL 259
            M +N+R T P+    PD  Y+TG+S++        HS II V +P++ ++  CP    PCL DG L  ++DG E+  L +P   E +A    VS+ N+P  CR FG  + WE    E  + G R L  E S  EW+L  P     + C +YV+      V       QS+H+  +I TP   VR S G  H+ A      G  LP+   WQ ++ +  + ++L  +   G+LGET  P R   G  +  G++AIRGT  DY V GP    F L
Sbjct:  629 MHLNMRVTAPVSSR-PDITYITGLSLITTDGGGQEHSIIISVKDPHNLDSD-CPPGVSPCLADGSLIVVLDGNET--LFAPGAVE-LAPDVKVSAVNIPGACRSFGFEKYWERKKLEYAQAGGRGLLTEQSMGEWILGDPTATNVEECTEYVARHVAGSVDGDLFAHQSEHTSFQIVTPTAVVRLSHGRRHQIA----ELG--LPDHVTWQMNLAVDHNDVSLSAK---GVLGETLIPTRAASGEYVMHGMEAIRGTEEDYHVDGPLGLGFNL 887          
BLAST of mRNA_H-elongata_contig9254.16708.1 vs. uniprot
Match: D7G4E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E8_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.640e-14
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    1 MDMQVNVRTTGPLPEDFPDRQYVTGVSILQNGHSFIIEVIEPYSGN-TPGCPDD-TFPCLVDGGLRFIVDGEESKA---LLSPTR 80
            +D+ VNVR T PLPE+FP+RQ VTG+S++   HS I+EV  PY  +   GC D  + PCL +GGL   V+GE+      LL P R
Sbjct:   39 IDLHVNVRLTAPLPEEFPERQLVTGLSVIAGEHSLILEVTNPYDTDINGGCLDGMSTPCLANGGLSVTVNGEKQMVDSPLLHPIR 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9254.16708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JNZ2_9PHAE2.220e-8953.03VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JS96_9PHAE7.190e-8749.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP35_9PHAE1.050e-8550.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LMW2_ECTSI7.730e-8248.09Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JP37_9PHAE1.510e-6742.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYD0_9PHAE3.180e-6243.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G544_ECTSI7.800e-3235.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5Y7_9PHAE2.110e-3037.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRC1_9PHAE2.250e-2934.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4E8_ECTSI1.640e-1448.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9254contigH-elongata_contig9254:1861..2667 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9254.16708.1mRNA_H-elongata_contig9254.16708.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9254 676..9329 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9254.16708.1 ID=prot_H-elongata_contig9254.16708.1|Name=mRNA_H-elongata_contig9254.16708.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=269bp
MDMQVNVRTTGPLPEDFPDRQYVTGVSILQNGHSFIIEVIEPYSGNTPGC
PDDTFPCLVDGGLRFIVDGEESKALLSPTRNENVAGTFAVSSSNLPIECR
EFGGGEEWELVYEEMRRGDRELAEPSFEEWVLDFPHMVAPDWCAKYVSEI
GLADVQSKHSVLRITTPDMTVRFSIGVNHRYAGKIDRFGRELPELDFWQS
SVGLSGINLENEHLTGILGETARPVRDTDGHVITKGIKAIRGTVADYRVS
GPTSKDFALLHKSVSTMP*
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