prot_H-elongata_contig92520.16705.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig92520.16705.1
Unique Nameprot_H-elongata_contig92520.16705.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length75
Homology
BLAST of mRNA_H-elongata_contig92520.16705.1 vs. uniprot
Match: D7FT44_ECTSI (PA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT44_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 6.890e-14
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 0
Query:    1 VVIAERGKCTFTAKVRHAQEASAAGLLIVNNESGVVHPPGPDGKDL 46
            VVIA RG CT+T K R+AQEASA+ LL+VNNE G++HPPGPDG DL
Sbjct:   54 VVIATRGSCTYTNKARNAQEASASALLVVNNEQGLLHPPGPDGMDL 99          
BLAST of mRNA_H-elongata_contig92520.16705.1 vs. uniprot
Match: A0A482RZ19_9ARCH (PA domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ19_9ARCH)

HSP 1 Score: 57.8 bits (138), Expect = 5.140e-8
Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    1 VVIAERGKCTFTAKVRHAQEASAAGLLIVNNESGVVHPPGPDGKDLGERVNIL 53
            V++  RG CTF  K +HAQ  +A+ ++I+NNE G+ H PGPD  DL   V+ +
Sbjct:  131 VLLVHRGSCTFGTKAKHAQLTNASAIVIINNEPGIDHLPGPDAHDLTFSVSSI 183          
BLAST of mRNA_H-elongata_contig92520.16705.1 vs. uniprot
Match: A0A7S1TXM3_9STRA (Hypothetical protein n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXM3_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 3.590e-7
Identity = 28/69 (40.58%), Postives = 41/69 (59.42%), Query Frame = 0
Query:    1 VVIAERGKCTFTAKVRHAQEASAAGLLIVNNESGVVHPPGPDGKDLGERVNILS-----RYSAFVRRAG 64
            VV+A RG CTF  K +  +  + +GL+I+NNE G+ H PGPD  +L   V ++S     R  ++V  AG
Sbjct:  200 VVLAYRGTCTFGTKAKLVKNYTDSGLVIMNNEPGLFHLPGPDASELELFVGLISNSTGHRLMSYVEEAG 268          
BLAST of mRNA_H-elongata_contig92520.16705.1 vs. uniprot
Match: A0A7S2CH50_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CH50_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 4.900e-7
Identity = 24/54 (44.44%), Postives = 36/54 (66.67%), Query Frame = 0
Query:    1 VVIAERGKCTFTAKVRHAQEASAAGLLIVNNESGVVHPPGPDGKDLGERVNILS 54
            +V+A+RG CTF  K ++   +  A L+IVNNE G +H PGPD  DL   V++++
Sbjct:  182 IVVAKRGTCTFGTKGKNVLASGGAALVIVNNEPGNMHAPGPDAHDLKLSVSMVA 235          
BLAST of mRNA_H-elongata_contig92520.16705.1 vs. uniprot
Match: A0A812RLD8_SYMMI (SPPL2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RLD8_SYMMI)

HSP 1 Score: 53.1 bits (126), Expect = 8.150e-7
Identity = 22/55 (40.00%), Postives = 36/55 (65.45%), Query Frame = 0
Query:    1 VVIAERGKCTFTAKVRHAQEASAAGLLIVNNESGVVHPPGPDGKDLGERVNILSR 55
            VV+  RGKCT+  K  + ++ +A+ ++I+NNE G+ H PGPD  D+   V  +S+
Sbjct:   75 VVLVNRGKCTYGQKALNVKKTAASAVIIINNEPGIDHLPGPDAHDVQIAVMSISQ 129          
BLAST of mRNA_H-elongata_contig92520.16705.1 vs. uniprot
Match: A0A6S8CTY5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8CTY5_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 2.860e-5
Identity = 22/61 (36.07%), Postives = 36/61 (59.02%), Query Frame = 0
Query:    1 VVIAERGKCTFTAKVRHAQEA------SAAGLLIVNNESGVVHPPGPDGKDLGERVNILSR 55
            +++A+RG CTF  K    + A        + LL++NNE G +H PGPD  D+   ++++SR
Sbjct:  154 IILAKRGTCTFGTKANITERALGIDKSKQSALLLINNEPGSMHAPGPDAHDVQLSISMVSR 214          
BLAST of mRNA_H-elongata_contig92520.16705.1 vs. uniprot
Match: A0A0H5R4T0_9EUKA (PA domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R4T0_9EUKA)

HSP 1 Score: 49.7 bits (117), Expect = 3.940e-5
Identity = 22/45 (48.89%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 VVIAERGKCTFTAKVRHAQEASAAGLLIVNNESGVVHPPGPDGKD 45
            VV+ +RG+CTF  KVR+AQEA AA +++VNNE  +      DG +
Sbjct:  134 VVLLKRGQCTFATKVRNAQEALAAAVIVVNNEDAIPKHMNSDGSN 178          
BLAST of mRNA_H-elongata_contig92520.16705.1 vs. uniprot
Match: A0A2V8AIB9_9BACT (Uncharacterized protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8AIB9_9BACT)

HSP 1 Score: 49.7 bits (117), Expect = 3.990e-5
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 VVIAERGKCTFTAKVRHAQEASAAGLLIVNNESGVVHPPGPDG 43
            +V+ +RG CTF+ K+R+AQ A AAG L+VNN +G     G DG
Sbjct:  426 IVVIDRGTCTFSTKIRNAQNAGAAGALVVNNVAGDPIAMGSDG 468          
BLAST of mRNA_H-elongata_contig92520.16705.1 vs. uniprot
Match: A0A2W0BZL1_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2W0BZL1_9BACT)

HSP 1 Score: 49.7 bits (117), Expect = 3.990e-5
Identity = 22/43 (51.16%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 VVIAERGKCTFTAKVRHAQEASAAGLLIVNNESGVVHPPGPDG 43
            +V+ +RG CTF+ K+R+AQ A AAG+L+VNN +G     G DG
Sbjct:  428 MVVLDRGACTFSTKIRNAQAAGAAGVLVVNNAAGDPIAMGTDG 470          
BLAST of mRNA_H-elongata_contig92520.16705.1 vs. uniprot
Match: A0A7S3ZJ86_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJ86_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 7.270e-5
Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0
Query:    2 VIAERGKCTFTAKVRHAQE-----ASAAGLLIVNNESGVVHPPGPDGKDLGERVNILSRY 56
            V+A+RG CTF  K  +  E     AS A LL+VNNE G  H PGPD  ++   V +++ +
Sbjct:  141 VVAKRGTCTFGTKATYLAESVEDNASLATLLLVNNEPGNQHAPGPDAHEVQASVAMVAEW 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig92520.16705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FT44_ECTSI6.890e-1471.74PA domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A482RZ19_9ARCH5.140e-845.28PA domain-containing protein n=1 Tax=archaeon TaxI... [more]
A0A7S1TXM3_9STRA3.590e-740.58Hypothetical protein n=6 Tax=Phaeomonas parva TaxI... [more]
A0A7S2CH50_9STRA4.900e-744.44Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A812RLD8_SYMMI8.150e-740.00SPPL2 protein (Fragment) n=1 Tax=Symbiodinium micr... [more]
A0A6S8CTY5_9STRA2.860e-536.07Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A0H5R4T0_9EUKA3.940e-548.89PA domain-containing protein (Fragment) n=1 Tax=Sp... [more]
A0A2V8AIB9_9BACT3.990e-551.16Uncharacterized protein n=2 Tax=Acidobacteria bact... [more]
A0A2W0BZL1_9BACT3.990e-551.16Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A7S3ZJ86_9STRA7.270e-541.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003137PA domainPFAMPF02225PAcoord: 2..41
e-value: 9.1E-6
score: 25.6
NoneNo IPR availableGENE3D3.50.30.30coord: 1..64
e-value: 6.8E-12
score: 47.4
NoneNo IPR availableSUPERFAMILY52025PA domaincoord: 1..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig92520contigH-elongata_contig92520:551..775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig92520.16705.1mRNA_H-elongata_contig92520.16705.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig92520 551..775 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig92520.16705.1 ID=prot_H-elongata_contig92520.16705.1|Name=mRNA_H-elongata_contig92520.16705.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp
VVIAERGKCTFTAKVRHAQEASAAGLLIVNNESGVVHPPGPDGKDLGERV
NILSRYSAFVRRAGHISSIQHYMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003137PA_domain