prot_H-elongata_contig91872.16642.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig91872.16642.1
Unique Nameprot_H-elongata_contig91872.16642.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
BLAST of mRNA_H-elongata_contig91872.16642.1 vs. uniprot
Match: UPI001AA1AADC (hypothetical protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI001AA1AADC)

HSP 1 Score: 76.3 bits (186), Expect = 7.070e-15
Identity = 47/114 (41.23%), Postives = 60/114 (52.63%), Query Frame = 0
Query:    3 TGSESIETIMRRRRILFAGFVARTDDTRLPKCVMFGEIMEGAGC-VGGQGKEWMGCLLENLK--------------VFGINVDQWTIAAQDEGEWRKTAEQGAEHFMKKWVAAE 101
            T  ESIET +R+RR+ FAG VAR    RLP  VMFG I  G     GGQ K W  C++E+L+              VFG+    W  AA+  G+W +   + AE FM +W  AE
Sbjct:   23 TRCESIETTIRKRRLFFAGGVARQSKDRLPSRVMFGTIAGGENPRPGGQVKTWHRCVVEDLREFRATEGSTELAPLVFGVETALWPTAAKKAGKWYRGILEAAERFMVRWHEAE 136          
BLAST of mRNA_H-elongata_contig91872.16642.1 vs. uniprot
Match: A0A6H5LG55_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG55_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 2.250e-14
Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 0
Query:    6 ESIETIMRRRRILFAGFVARTDDTRLPKCVMFGEIMEGAGCVGGQGKEWMGCLLENLKVFGINV----DQWTIAAQDEGEWRKTAEQGAEHFMKKW 97
            E+IE  +R+RR+ FAGFV R +D+RLPK ++ G +  G G  GGQ  +W+  L E+L  F +      D+W  +A+D   W    E+GA  FM+KW
Sbjct:  302 ETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFSMGDEMEGDKWKESAKDPEVWYNKVEKGAAWFMRKW 397          
BLAST of mRNA_H-elongata_contig91872.16642.1 vs. uniprot
Match: A0A6H5JNV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV8_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 7.620e-14
Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = 0
Query:    6 ESIETIMRRRRILFAGFVARTDDTRLPKCVMFGEIMEGAGCVGGQGKEWMGCLLENLKVFGINVDQ----WTIAAQDEGEWRKTAEQGAEHFMKKW 97
            E+IE  +R+RR+ FAGFV R +D+RLPK ++ G +  G G  GGQ  +W+  L E+L  F +  ++    W  +A++   W    E GA  FM+KW
Sbjct:   62 ETIEATVRKRRLCFAGFVLRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKW 157          
BLAST of mRNA_H-elongata_contig91872.16642.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 8.630e-14
Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = 0
Query:    6 ESIETIMRRRRILFAGFVARTDDTRLPKCVMFGEIMEGAGCVGGQGKEWMGCLLENLKVFGINVDQ----WTIAAQDEGEWRKTAEQGAEHFMKKW 97
            E+IE  +R+RR+ FAGFV R +D+RLPK ++ G +  G G  GGQ  +W+  L E+L  F ++ ++    W  +A+D   W    E GA  FM+KW
Sbjct:  696 ETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMSDEKEGGKWKESAKDPEVWYNKVEDGAAWFMRKW 791          
BLAST of mRNA_H-elongata_contig91872.16642.1 vs. uniprot
Match: A0A6H5K0C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C0_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 1.360e-13
Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = 0
Query:    6 ESIETIMRRRRILFAGFVARTDDTRLPKCVMFGEIMEGAGCVGGQGKEWMGCLLENLKVFGINVDQ----WTIAAQDEGEWRKTAEQGAEHFMKKW 97
            E+IE  +R+RR+ FAGFV R +D+RLPK ++ G +  G G  GGQ  +W+  L E+L  F +  ++    W  +A+D   W    + GA  FM+KW
Sbjct:  226 ETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKDPEVWYNKVKDGAARFMRKW 321          
BLAST of mRNA_H-elongata_contig91872.16642.1 vs. uniprot
Match: A0A6H5JCS2_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS2_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 1.960e-13
Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 0
Query:    6 ESIETIMRRRRILFAGFVARTDDTRLPKCVMFGEIMEGAGCVGGQGKEWMGCLLENLKVFGINVDQ----WTIAAQDEGEWRKTAEQGAEHFMKKW 97
            E+IE  +R+RR+ FAGFV R +D+RLPK ++ G +  G G  GGQG +W+  L E L  F +  ++    W  +A+D   W    E  A  FM+KW
Sbjct:  182 ETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQGSDWVSRLGEYLVAFNMGDEKEGGKWKESAKDSEVWYNKVEDVAAWFMRKW 277          
BLAST of mRNA_H-elongata_contig91872.16642.1 vs. uniprot
Match: A0A6H5JEX7_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX7_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.980e-13
Identity = 47/115 (40.87%), Postives = 64/115 (55.65%), Query Frame = 0
Query:    2 KTGSESIETIMRRRRILFAGFVARTDDTRLPKCVMFGEIMEGAGCVGGQG---KEWMGCLLENLK--------------VFGINVDQWTIAAQDEG--EWRKTAEQGAEHFMKKW 97
            + G +S+E  +R+RR+LFAG VAR  D RLPK +MFGE++ G G   GQG   + W+ CL +++K              VFG+    W+ AA+ EG   W     QGAE FM  W
Sbjct:  634 RVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEGP--GQGNPEQNWLTCLKDDMKMFEARYGSTTDKPSVFGVPKLVWSEAAKVEGGVPWHAGVLQGAERFMASW 746          
BLAST of mRNA_H-elongata_contig91872.16642.1 vs. uniprot
Match: A0A6H5KN74_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN74_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.980e-13
Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = 0
Query:    6 ESIETIMRRRRILFAGFVARTDDTRLPKCVMFGEIMEGAGCVGGQGKEWMGCLLENLKVFGINVDQ----WTIAAQDEGEWRKTAEQGAEHFMKKW 97
            E+IE  +R+RR+ FAGFV RT+D+RLPK ++   +  G G  GGQ  +W+  L E+L  F +  ++    W  +A++   W    E GA  FM+KW
Sbjct:  131 ETIEATVRKRRLCFAGFVMRTEDSRLPKRMLLRAMTGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKW 226          
BLAST of mRNA_H-elongata_contig91872.16642.1 vs. uniprot
Match: A0A6H5L618_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L618_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 3.000e-13
Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 0
Query:    6 ESIETIMRRRRILFAGFVARTDDTRLPKCVMFGEIMEGAGCVGGQGKEWMGCLLENLKVFGINVDQ----WTIAAQDEGEWRKTAEQGAEHFMKKW 97
            E+IE  +R+RR+ FAGFV R +D+RLPK ++ G +  G G  GGQ  +W+  L E+L  F +  ++    W  +A+D   W    E GA  FM+KW
Sbjct:  601 ETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVPRLGEDLVAFNMRDEKEGGKWKESAKDPEVWYDKVEDGAAWFMRKW 696          
BLAST of mRNA_H-elongata_contig91872.16642.1 vs. uniprot
Match: A0A6H5L2N2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2N2_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 3.700e-13
Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = 0
Query:    6 ESIETIMRRRRILFAGFVARTDDTRLPKCVMFGEIMEGAGCVGGQGKEWMGCLLENLKVFGINVDQ----WTIAAQDEGEWRKTAEQGAEHFMKKW 97
            E+IE  +R+RR+ FAGFV R +D+RLPKC+    +  G G  GGQ  +W+  L E+L  F +  ++    W  +A++   W    E GA  FM+KW
Sbjct:  301 ETIEATVRKRRLCFAGFVMRMEDSRLPKCMPLEAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKW 396          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig91872.16642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001AA1AADC7.070e-1541.23hypothetical protein n=1 Tax=Vibrio parahaemolytic... [more]
A0A6H5LG55_9PHAE2.250e-1441.67Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JNV8_9PHAE7.620e-1439.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGX2_9PHAE8.630e-1440.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0C0_9PHAE1.360e-1339.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCS2_9PHAE1.960e-1340.63Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JEX7_9PHAE2.980e-1340.87Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KN74_9PHAE2.980e-1339.58Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L618_9PHAE3.000e-1340.63MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L2N2_9PHAE3.700e-1339.58Reverse transcriptase domain-containing protein n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig91872contigH-elongata_contig91872:2003..2326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig91872.16642.1mRNA_H-elongata_contig91872.16642.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig91872 2003..2347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig91872.16642.1 ID=prot_H-elongata_contig91872.16642.1|Name=mRNA_H-elongata_contig91872.16642.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
MKTGSESIETIMRRRRILFAGFVARTDDTRLPKCVMFGEIMEGAGCVGGQ
GKEWMGCLLENLKVFGINVDQWTIAAQDEGEWRKTAEQGAEHFMKKWVAA
EKVRAELR
back to top