prot_H-elongata_contig91864.16641.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig91864.16641.1
Unique Nameprot_H-elongata_contig91864.16641.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length142
Homology
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BLAST of mRNA_H-elongata_contig91864.16641.1 vs. uniprot
Match: J9LE10_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9LE10_ACYPI)

HSP 1 Score: 71.6 bits (174), Expect = 7.150e-12
Identity = 49/149 (32.89%), Postives = 78/149 (52.35%), Query Frame = 0 
Query:    1 RSKELVFATWNVRTMSERGTNGPGHAEDLLMFAAKYECDFIAIQETRRDGKTTIQAPATGYVVH--CSGHCDGGLGDVQVLGP-YGR----DTLNDNGSRLLACATEQKLPIVNTLFSTPKRGGNSDAFTHEGPKELHRWRLDYILVRQ 142
            R ++L+F TWNVRTM +     PG A  ++    KY+   +A+QETR   + TI    T  +++  C+     G+G  Q L P  G+    +T NDNG +L+  AT +   I++T+F  P +  N    T   P   H  ++D+IL+ +
Sbjct:   40 RKQDLLFGTWNVRTMFQ-----PGTAISVVKEIEKYKIKIVALQETRWSDEGTIDINDTAAILYDKCNERRQFGIGKEQFLKPTIGKYRLHETTNDNGMKLIDLATGKGFRIMSTMF--PYK--NIHKSTRRSPDGQHVNQIDHILMNE 179
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BLAST of mRNA_H-elongata_contig91864.16641.1 vs. uniprot
Match: A0A6H5J5Z5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5Z5_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 9.310e-9
Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 0 
Query:   72 GLGDVQVLGPYGRDTLNDNGSRLLACATEQKLPIVNTLFSTPKRGGNSDAFTHEGPKELHRWRLDYILVRQ 142
            G  D +++G YGRD++N+NG RLL  A++ +L + NT F TPK G      T +   +  ++ LD+IL+RQ
Sbjct:   91 GCCDAKIMGAYGRDSMNNNGERLLGPASDNQLSLTNTYFRTPKGGVQH---TFQSSNKGKKYHLDFILMRQ 158
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BLAST of mRNA_H-elongata_contig91864.16641.1 vs. uniprot
Match: A0A654HQ13_9CEST (Uncharacterized protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654HQ13_9CEST)

HSP 1 Score: 55.5 bits (132), Expect = 3.620e-6
Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 0 
Query:   78 VLGPYGRDTLNDNGSRLLACATEQKLPIVNTLFSTPKRGGNSDAFTHEGPKELHRWRLDYILVRQ 142
            VLGP+GR+ LNDNG  LL    EQ+L + NT F  P +     A+ H   ++ H   LDY+LVR+
Sbjct:  406 VLGPHGRNGLNDNGLLLLRTCAEQRLILTNTFFRLPMQ--EETAWMHPRSRQWHL--LDYVLVRR 466
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig91864.16641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
J9LE10_ACYPI7.150e-1232.89Uncharacterized protein n=1 Tax=Acyrthosiphon pisu... [more]
A0A6H5J5Z5_9PHAE9.310e-940.85Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A654HQ13_9CEST3.620e-644.62Uncharacterized protein n=1 Tax=Sparganum prolifer... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..114
e-value: 3.7E-5
score: 25.6
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 4..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig91864contigH-elongata_contig91864:1451..2185 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig91864.16641.1mRNA_H-elongata_contig91864.16641.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig91864 1451..2185 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig91864.16641.1 ID=prot_H-elongata_contig91864.16641.1|Name=mRNA_H-elongata_contig91864.16641.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
RSKELVFATWNVRTMSERGTNGPGHAEDLLMFAAKYECDFIAIQETRRDG
KTTIQAPATGYVVHCSGHCDGGLGDVQVLGPYGRDTLNDNGSRLLACATE
QKLPIVNTLFSTPKRGGNSDAFTHEGPKELHRWRLDYILVRQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf