prot_H-elongata_contig91800.16637.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig91800.16637.1
Unique Nameprot_H-elongata_contig91800.16637.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
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BLAST of mRNA_H-elongata_contig91800.16637.1 vs. uniprot
Match: D7FIC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIC2_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 3.550e-17
Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 0 
Query:   28 GGRSARIKSVSGDPPRSDNFQLVVLGRDEGSAADGADSKAQAAENAQKFLRERTAKQRRVSHSVFKARKRLGPSPEF 104
            G R AR K+  GD  RSDNF+LVVL  D+G      +SKA AAE+A+ FLR+R   ++RVSHS+FKARKRLGPSP F
Sbjct:  142 GRRKARAKA--GDASRSDNFRLVVLDEDDGGVDADDESKAHAAESAKNFLRDRMGSRKRVSHSLFKARKRLGPSPNF 216
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig91800.16637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIC2_ECTSI3.550e-1759.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig91800contigH-elongata_contig91800:1070..1632 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig91800.16637.1mRNA_H-elongata_contig91800.16637.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig91800 431..1941 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig91800.16637.1 ID=prot_H-elongata_contig91800.16637.1|Name=mRNA_H-elongata_contig91800.16637.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
MQDEALRARHQEEEKEAEAVEASLEGTGGRSARIKSVSGDPPRSDNFQLV
VLGRDEGSAADGADSKAQAAENAQKFLRERTAKQRRVSHSVFKARKRLGP
SPEF*
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