prot_H-elongata_contig9177.16633.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9177.16633.1
Unique Nameprot_H-elongata_contig9177.16633.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length166
Homology
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: D8LCB7_ECTSI (All0748 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB7_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 4.350e-75
Identity = 124/163 (76.07%), Postives = 140/163 (85.89%), Query Frame = 0
Query:    1 MEREEQERIAERKARIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSDRMDVEDMIADEEARKANRYQRRQMRKTD 163
            ME EE+ERIA+R+ RI +V++ KAA E DP AGSIPE+VSNRML RMVPFF+LPALGGVGVFV VYVLS  Y+YTIPAYIVAY TQAPF VAL GITYAI+S+SWDEDREGTF GF+EAKRN GNI +GL+RSSDRMDVEDM+AD+E    NR QRRQMRK D
Sbjct:  153 MEAEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFVLPALGGVGVFVTVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERMSMNRRQRRQMRKED 315          
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A6H5L0S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S3_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 7.600e-70
Identity = 115/146 (78.77%), Postives = 130/146 (89.04%), Query Frame = 0
Query:    1 MEREEQERIAERKARIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSDRMDVEDMIADE 146
            ME EE+ERIA+R+ RI +V++ KAA E DP AGSIPE+VSNRML RMVPFFLLPALGGVGVFVAVYVLS  Y+YTIPAYIVAY TQAPF VAL GITYAI+S+SWDEDREGTF GF+EAKRN GNI +GL+RSSDRMDVEDM+AD+
Sbjct:  153 MEAEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQ 298          
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A835Z7Y5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y5_9STRA)

HSP 1 Score: 149 bits (377), Expect = 8.190e-42
Identity = 76/160 (47.50%), Postives = 119/160 (74.38%), Query Frame = 0
Query:    1 MEREEQERIAERKARIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSDRMDVEDMIADEEARKANRYQRRQMR 160
            M+ E + R+  +K R+A++   +A  +++P AG IP++V+NRML RM+PFF+LP L GVGVFV  +VL+K Y+ +    +VA+ TQAPF ++L+GITYAILS+SWD +REG+ LGF+E + N G I +GL+RSS+R ++++ + ++E R  NR +RR+ +
Sbjct:  102 MKEERERRVQAQKQRMADIKAAQAITKDNPDAGVIPDLVANRMLARMIPFFVLPVLAGVGVFVYFFVLAKRYDTSFQPGMVAFATQAPFAISLVGITYAILSASWDPEREGSALGFDEFRSNAGAILEGLRRSSERQELDEQLEEQEKR-VNRAERRRQK 260          
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A6U0UN43_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UN43_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.830e-34
Identity = 69/142 (48.59%), Postives = 99/142 (69.72%), Query Frame = 0
Query:   10 AERKARIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSDRMDVED-MIADEEARK 150
            AER A++   +EE+A   ++P AG IP+ VS RML RMVP F LP + G+  FVA Y   +     +   +VAY TQAPF + L+G++Y +LS+SWDED EG+FLG EE + NVG ++DG++R+++R D+ED ++A EEA K
Sbjct:  109 AERAAKVDMYVEERAEIRKNPRAGVIPDAVSKRMLGRMVPLFSLPFVLGIAAFVAFYFYGQKTGNQMQPTVVAYSTQAPFFLGLVGLSYGVLSASWDEDEEGSFLGIEEFQTNVGRLFDGVQRAAERRDLEDEILAREEALK 250          
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A7S2STX2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STX2_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.730e-27
Identity = 55/121 (45.45%), Postives = 80/121 (66.12%), Query Frame = 0
Query:   15 RIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSD 135
            R+ ++ E +    E+P AG IPEVV+ RML RM+P   +P  GG+ +FV  Y+ +  ++  I   +VAY T AP+L+ L G+TY ILS+SWD + EG+FLG EE K N+  I DGL+R+ +
Sbjct:  100 RLEDMKEVEKVLRENPDAGVIPEVVAQRMLGRMLPLAAVPIFGGIALFVGFYIAATKWDLEIQPTVVAYATTAPWLLGLAGLTYGILSASWDPEVEGSFLGTEEVKLNLSRIADGLRRAGE 220          
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: W7TZB0_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZB0_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.880e-26
Identity = 60/128 (46.88%), Postives = 85/128 (66.41%), Query Frame = 0
Query:   33 GSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSS-DRMDVEDMIADEEARKANRYQRRQM 159
            G +PE +SNRMLKR++PF L P LGG+G+F     L+KN E  +P   VA+ TQ PFL AL+GITY+I+S+SW+ + EG+F GF E K NV N+ D L+++  +    E M     +R  NR +RR++
Sbjct:  171 GYLPERISNRMLKRLLPFILFPVLGGIGLFGFYLYLAKNTEIDVPPAFVAFSTQVPFLAALVGITYSIMSTSWEPEVEGSFWGFTEFKANVLNLLDSLQKTKREESAKEKMEKYSGSRGPNRAKRREL 298          
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A0G4F121_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F121_VITBC)

HSP 1 Score: 106 bits (264), Expect = 4.430e-25
Identity = 52/114 (45.61%), Postives = 79/114 (69.30%), Query Frame = 0
Query:   20 LEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRS 133
            L++   A +D +AG++PEVVS R++ R+VPFFL P       F+  ++L   ++Y I   I+AYITQ  FL+AL G++Y ILSSSW+EDREG+F G +E KRN+  +  G++++
Sbjct:  104 LKQLREAGKDGNAGTMPEVVSQRIISRIVPFFLTPLAFAFSTFIGGFLLYSQFDYRIEPSIIAYITQFSFLLALGGVSYGILSSSWEEDREGSFWGADEFKRNIKRVASGVRQT 217          
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: R1FQ09_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FQ09_EMIHU)

HSP 1 Score: 105 bits (262), Expect = 9.510e-25
Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 0
Query:   29 DPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKR 132
            DPSAG +PEVVSNRML R+VPF  LP  G   VFV  Y  +   +  +P  ++AY TQA F ++  GIT+ +LS+SWDE+ EG+ LG E+  RNV  + DG+ R
Sbjct:  113 DPSAGVMPEVVSNRMLSRVVPFAGLPVFGSFLVFVGAYYANTQLDLDVPPQVIAYATQACFALSFAGITWGVLSTSWDEETEGSLLGTEQVGRNVAMMRDGMAR 216          
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A7S2NSH2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NSH2_9EUKA)

HSP 1 Score: 103 bits (257), Expect = 7.820e-24
Identity = 52/94 (55.32%), Postives = 63/94 (67.02%), Query Frame = 0
Query:   29 DPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRN 122
            DPSAG +PEVVS RML R+VPF  LP  GG  VFV  Y  +   E  +P  IVAY TQ   L++  GITY ++S+SWDE++EGT LG E  KRN
Sbjct:  139 DPSAGVMPEVVSQRMLNRVVPFAALPVFGGALVFVGFYYANTQLELDVPPMIVAYATQVLLLLSFAGITYGVMSTSWDEEKEGTLLGTENLKRN 232          
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A7S2BKL3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKL3_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.620e-23
Identity = 62/159 (38.99%), Postives = 94/159 (59.12%), Query Frame = 0
Query:    6 QERIAERKARIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSDRMDVEDMIADEEARK---ANRYQRRQMRK 161
            +E +A+   R A + E + A +E+P+AG IPE V+NRMLKRM+     P  GG+G+FV  Y+ +  ++  +   IVA  T  P+L+ L G+TY +LS+SWD + EG+ LG +E K N+  I  G+ RS    +  +    ++ +    ANR QRRQ  K
Sbjct:   89 EEDLAKADERYAELSEVQEALKENPAAGVIPEAVANRMLKRMLTLAAPPIFGGIGLFVVFYISATQWDTDVAPPIVAAATTVPWLLGLAGLTYGVLSASWDPEVEGSALGLDEFKENLKIIGAGVLRSGQDSEFREQYEYQQRKNNAPANREQRRQDEK 247          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCB7_ECTSI4.350e-7576.07All0748 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L0S3_9PHAE7.600e-7078.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7Y5_9STRA8.190e-4247.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U0UN43_9STRA1.830e-3448.59Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2STX2_9STRA1.730e-2745.45Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TZB0_9STRA1.880e-2646.88Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A0G4F121_VITBC4.430e-2545.61Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
R1FQ09_EMIHU9.510e-2550.00Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A7S2NSH2_9EUKA7.820e-2455.32Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S2BKL3_9STRA1.620e-2338.99Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 9..29
NoneNo IPR availablePANTHERPTHR34575:SF1PROTEIN PAM68, CHLOROPLASTICcoord: 17..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..101
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
IPR021855PAM68-likePFAMPF11947DUF3464coord: 12..131
e-value: 2.2E-33
score: 115.1
IPR021855PAM68-likePANTHERPTHR34575FAMILY NOT NAMEDcoord: 17..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9177contigH-elongata_contig9177:4206..7307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9177.16633.1mRNA_H-elongata_contig9177.16633.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9177 311..7955 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9177.16633.1 ID=prot_H-elongata_contig9177.16633.1|Name=mRNA_H-elongata_contig9177.16633.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bp
MEREEQERIAERKARIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPF
FLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAI
LSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSDRMDVEDMIADEEARK
ANRYQRRQMRKTDDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021855PAM68-like