prot_H-elongata_contig9161.16620.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9161.16620.1 vs. uniprot
Match: D8LE56_ECTSI (TFIIS-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE56_ECTSI) HSP 1 Score: 186 bits (472), Expect = 1.380e-57 Identity = 86/104 (82.69%), Postives = 95/104 (91.35%), Query Frame = 0
Query: 1 MYPKENKAGRKLMYACSRCTFQEAAKSSCCVYRNDIITTAGNKLDIVQADVVDDPTLQRSKHAICEKCNYNEAVFFQADEGTKSQSLSLIFVCTNRGCGHKWVS 104
M+PKENK RKLMY+C+RC ++E A+S CVYRN++ITTAGNKLDIVQ DVVDDPTLQRSK+AICEKCNYNEAVFFQADEG KSQSLSLIFVCTNR CGHKWVS
Sbjct: 134 MHPKENKTDRKLMYSCNRCKYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS 237
BLAST of mRNA_H-elongata_contig9161.16620.1 vs. uniprot
Match: A0A835YYP5_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYP5_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.670e-39 Identity = 65/103 (63.11%), Postives = 80/103 (77.67%), Query Frame = 0
Query: 1 MYPKENKAGRKLMYACSRCTFQEAAKSSCCVYRNDIITTAGNKLDIVQADVVDDPTLQRSKHAICEKCNYNEAVFFQADEGTKSQSLSLIFVCTNRGCGHKWV 103
++PKEN+ R L YAC+RC ++E A SC VY N+++ T KLDIV DVV+DPTLQRSKH IC++CNY+EAVFFQAD+ KS SLSLIFVCT+ CG KWV
Sbjct: 11 LHPKENRTTRTLFYACNRCAYREEAGQSC-VYENNLVKTTELKLDIVHEDVVNDPTLQRSKHQICDRCNYSEAVFFQADDSAKSSSLSLIFVCTH--CGKKWV 110
BLAST of mRNA_H-elongata_contig9161.16620.1 vs. uniprot
Match: A0A7S3HGL0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGL0_9STRA) HSP 1 Score: 103 bits (256), Expect = 2.260e-26 Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = 0
Query: 1 MYPKENKAGRKLMYACSR--CTFQEAAKSSCCVYRNDIITTAGNKLDIVQADVVDDPTLQRSKHAICEKCNYNEAVFFQADEGTKSQSLSLIFVCTNRGCGHKWV 103
+YP+EN+ + L Y C + C + E S CV+ N+II + +L+++ +DV DPTLQRS+ C C +NEAVFFQA++ TKS +L+L+FVC N CGHKW+
Sbjct: 12 LYPRENRQLKALEYYCKQNDCPYTEINLPSTCVFVNEIIKDSSTRLEVILSDVNKDPTLQRSRDINCTGCGFNEAVFFQAEQTTKSTALNLVFVCCN--CGHKWM 114
BLAST of mRNA_H-elongata_contig9161.16620.1 vs. uniprot
Match: A0A7S3NJ32_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJ32_9STRA) HSP 1 Score: 102 bits (255), Expect = 7.030e-26 Identity = 50/101 (49.50%), Postives = 65/101 (64.36%), Query Frame = 0
Query: 3 PKENKAGRKLMYACSRCTFQEAAKSSCCVYRNDIITTAGNKLDIVQADVVDDPTLQRSKHAICEKCNYNEAVFFQADEGTKSQSLSLIFVCTNRGCGHKWV 103
P+E + R LM C C ++E A +S VY N I +LDI+ ++ DDPTLQRS +CE CNY+EAV FQA+ G ++SLSLIFVC N C HKW+
Sbjct: 45 PREERTTRTLMLNCRNCGYEEPA-TSYKVYENRIKKEVSTRLDIINPEITDDPTLQRSNDVVCENCNYSEAVLFQAESGITAKSLSLIFVCCN--CKHKWI 142
BLAST of mRNA_H-elongata_contig9161.16620.1 vs. uniprot
Match: A0A1Y1IMB2_KLENI (DNA-directed RNA polymerase subunit n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMB2_KLENI) HSP 1 Score: 100 bits (248), Expect = 3.710e-25 Identity = 51/102 (50.00%), Postives = 66/102 (64.71%), Query Frame = 0
Query: 1 MYPKENKAGRKLMYACSRCTFQEAAKSSCCVYRNDIITTAGNKLDIVQADVVDDPTLQRSKHAICEKCNYNEAVFFQADEGTKSQSLSLIFVCTNRGCGHKW 102
+YP+ENKA ++L YAC RC F E A+ SC VYRN+I TA + ++Q DV DPTL RSK C C + EAVFFQA + + ++L FVC N C H+W
Sbjct: 14 LYPRENKAEKRLEYACGRCDFSEDAEQSC-VYRNEIHHTADERTQVLQ-DVTSDPTLPRSKALRCPVCKHGEAVFFQATSRGE-EGMTLFFVCCNPNCQHRW 112
BLAST of mRNA_H-elongata_contig9161.16620.1 vs. uniprot
Match: A0A6U0QUP1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0QUP1_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 4.860e-24 Identity = 53/104 (50.96%), Postives = 66/104 (63.46%), Query Frame = 0
Query: 1 MYPKENKAGRKLMYACSRCTFQEAAKSSCCVYRNDIITTAGNKLDIVQADVVDDPTLQRSKHAICEKCNYNEAVFFQADEGTKSQSLSLIFVCTNRGCGHKWVS 104
+YPKE+K R L YAC C + E + +YRN I GN L V V DDPTL RS ++ CE C +NEAVFFQ+D G +S SL+LIFVC+N C KWV+
Sbjct: 46 LYPKEHKRSRSLRYACRLCRYSEESPHPM-IYRNLIKKEVGNVLHTVPGSVSDDPTLPRSHNSNCESCGHNEAVFFQSDTG-QSDSLALIFVCSN--CEFKWVA 145
BLAST of mRNA_H-elongata_contig9161.16620.1 vs. uniprot
Match: UPI001D0951AA (DNA-directed RNA polymerase II subunit RPB9 n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D0951AA) HSP 1 Score: 94.7 bits (234), Expect = 7.870e-23 Identity = 47/103 (45.63%), Postives = 62/103 (60.19%), Query Frame = 0
Query: 1 MYPKENKAGRKLMYACSRCTFQEAAKSSCCVYRNDIITTAGNKLDIVQADVVDDPTLQRSKHAICEKCNYNEAVFFQADEGTKSQSLSLIFVCTNRGCGHKWV 103
+YPKE+K + L+YAC C +++ A S+C +Y N I+ IV DVV DPTL RS+ C KCNY EAVFFQA + + L +VCTN C H+W
Sbjct: 31 LYPKEDKENKVLLYACRNCDYKQLADSNC-IYVNKIMHEIDELTHIVP-DVVSDPTLPRSEDHHCPKCNYREAVFFQAQTRRAEEEMRLYYVCTNPQCTHRWT 131
BLAST of mRNA_H-elongata_contig9161.16620.1 vs. uniprot
Match: W7T555_9STRA (Dna-directed rna polymerase ii kDa polypeptide n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T555_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 4.350e-22 Identity = 52/105 (49.52%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 1 MYPKENKAGRKLMYACS--RCTFQEAAKSSCCVYRNDIITTAGNKLDIVQADVVDDPTLQRSKHAICEKCNYNEAVFFQADEGTKSQSLSLIFVCTNRGCGHKWV 103
+YPKE+K RKL+Y C RC +E A V+RN +I T LD V + V +DPTLQRS A C C+Y+EAV Q+ + KS L+LIFVC N CGHKW
Sbjct: 65 LYPKEDKDERKLVYYCRSPRCDHEEDAPDPY-VFRNQVIKTRTVNLDHVLSAVANDPTLQRST-ADCPLCHYHEAVLIQSTQNVKSNKLTLIFVCCNPNCGHKWT 167
BLAST of mRNA_H-elongata_contig9161.16620.1 vs. uniprot
Match: A0A8B8JSG6_ABRPR (DNA-directed RNA polymerase subunit n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8JSG6_ABRPR) HSP 1 Score: 90.9 bits (224), Expect = 1.570e-21 Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 0
Query: 1 MYPKENKAGRKLMYACSRCTFQEAAKSSCCVYRNDIITTAGNKLDIVQADVVDDPTLQRSKHAICEKCNYNEAVFFQADEGTKSQSLSLIFVCTNRGCGHKW 102
+YPKENK R L+YAC C +E A S+ VYRN+I + + + ++ ++ DPTL R+K C KCN EAVFF+A + T +SL+FVC+N C H+W
Sbjct: 14 LYPKENKEQRILLYACRTCDHEEIADSNI-VYRNEIRQSVERRPEELE-NIASDPTLPRTKSVRCSKCNNGEAVFFRA-KATGEDDMSLVFVCSNLACSHRW 112
BLAST of mRNA_H-elongata_contig9161.16620.1 vs. uniprot
Match: A0A1X2HED9_SYNRA (DNA-directed RNA polymerase subunit n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HED9_SYNRA) HSP 1 Score: 90.5 bits (223), Expect = 2.230e-21 Identity = 44/103 (42.72%), Postives = 67/103 (65.05%), Query Frame = 0
Query: 1 MYPKENKAGRKLMYACSRCTFQEAAKSSCCVYRNDIITTAGNKLDIVQADVVDDPTLQRSKHAICEKCNYNEAVFFQADEGTKSQSLSLIFVCTNRGCGHKWV 103
+YP+E+KA R+LM+AC C ++E A + C VYR++II + +V +D+ DPTL R+ + C +C Y EAVFFQ+ ++L +VC +R CGH+WV
Sbjct: 14 LYPREDKANRRLMFACRNCQYEEDADNFC-VYRHEIIHQPSEQT-MVLSDLSIDPTLPRA-NVTCPQCGYEEAVFFQSSSRRADAKMTLFYVCGDRMCGHRWV 113 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9161.16620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig9161.16620.1 ID=prot_H-elongata_contig9161.16620.1|Name=mRNA_H-elongata_contig9161.16620.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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