prot_H-elongata_contig9005.16495.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9005.16495.1
Unique Nameprot_H-elongata_contig9005.16495.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length506
Homology
BLAST of mRNA_H-elongata_contig9005.16495.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 1.670e-39
Identity = 119/394 (30.20%), Postives = 191/394 (48.48%), Query Frame = 0
Query:   92 IPPSWRLALVVLDAVRDGVKPIDAARRHMNIKDPLP---VESKKKRSWVPLEELQLHWTDVLNILKHDLPTELIPDDPKFALQSVMDMRERGGSLLKHP--EVVFLDVESFALSLAPILNHKTQQRGGEGTCIFAERKLEEAWQYDAKEQLVSKGILETRFAVFLWGNDSGDLPHQT-------FDVLVKLGVLLPLPLRIHTPVDHCFLDQAWENMTS-CRNVKEFMVLMRLPQNAPCETLARFNAF-NKLREDWGVVAEWEFSLGRTPHGLVERLIASCHYIGNVVRNTCWRRGACFVAHQKAINLAGGSFALSLQFTQSSTSNLRTVGTLVVKAFGNRKGRAVWGALRFVISTVWSLFQEFPGLSWQARMMCPKHEGRIIHYLAGPKDIKV 471
            +PP+W LAL V+ A+R    PI AAR  + + +PLP   V      +++  +EL   W  V++ L+ D+P  +I  + + AL+  + + +  G  L+    + +FLDV   +  L+PIL+HK + +             E  W +  ++ L   GIL   FA+ +W    G++  ++       F VL+KLGV LP+  R  T + H   D++     S      + +V+MRL +         F+   +K+  D  V  +WEF     P+GL+ERLIASCH +G V    CWR GA F +H   +    G      +   S TS   +      K FG      VW A+R+V S + +L +E+PG+ W   + C KH  + + Y+A   + +V
Sbjct:  274 VPPAWDLALEVIGALRASCNPIAAARDKLGLPNPLPADGVADVHAFAFISKDELSRKWRSVVDNLRDDVPAAMI-SNWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKNQ-----------PFENRWLW-MRDDLAGDGILRREFALHIWRESVGEVVMESEEVAEALFSVLIKLGVALPMGRR--TLLAHS--DRSTPTAPSDVSGSNDMLVIMRLSETCNEHQRTLFDGLASKMPRD-RVTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHD--MRFVEGRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHL-YMASSVEARV 646          
BLAST of mRNA_H-elongata_contig9005.16495.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 1.830e-33
Identity = 126/424 (29.72%), Postives = 199/424 (46.93%), Query Frame = 0
Query:   67 ACYYENGLADLQERLKTCGEGTRWLIPPSWRLALVVLDAVRDGVKPIDAARRHMNIKDPLPVESKKKRSWVPLEELQLHWTDVLNILKHDL--PTE-LIPDDPKFALQSVMDMRERGGSLLK--HPEVVFLDVESFALSLAPILNHKTQQRGGEGTCIFAERKLEEAWQYDAKEQLVSKGILETRFAVFLWGNDSGDLPHQTF-----DVLVKLGVLLPLPLRI-HTPVDHCFLDQAWENMTSCRNVKEFMVLMRLP----QNAPCETLARFNAFNKLREDWGVVAEWEFSLGRTPHGLVERLIASCHYIGNVVRNTCWRRGACFVAHQKAINLAGGS---FALSLQFTQSSTSNLRTVGTLVVKAFGNRKGRAVWGALRFVISTVWSLFQEFPGLSWQARMMCPKH-EGRIIHYLAGPKDIKV 471
            +C    GL+++  R+   G  T  ++PPSW LAL  LDA+RD   P  A RR +++     V + +  S++    L   W D +  +  +L  P E +   D   A++  + + E  G +L+  H +V+FLDV   + +L PIL+HK +         F   +L        K++LV  G+L  +FA +LW  +    P +        VL  LGV LPL     HT      +D A  +    R  ++ +V+MRLP    +N   E        ++      V  +W F      HGLVER+IASCH +G+V    CWR GA F ++ +A +  GG    ++  +++ +   S  R    L V  FG      +W ALR+V S+V +    +PG+ W+    C  H  GR+  Y   P + ++
Sbjct:  557 SCDDGGGLSEVIARVDAQG-ATSIVVPPSWGLALAFLDALRDSRDPEPATRRFLHLDFDAEVGAAQGSSFMTESTLFQRWNDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESH------FFPRSELTAM-----KDELVDNGVLRLKFAEYLWDLEMEAPPSEEVMDALCGVLHSLGVALPLGREERHTA---SAIDPAAAHGQIGR--QDMLVIMRLPDTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARADD--GGLNWLYSFVIRYDEEVGSGERV---LAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRM--YFKTPIEARI 956          
BLAST of mRNA_H-elongata_contig9005.16495.1 vs. uniprot
Match: A0A6H5JME6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 6.190e-16
Identity = 98/393 (24.94%), Postives = 155/393 (39.44%), Query Frame = 0
Query:   87 GTRWLIPPSWRLALVVLDAV---------------RDGVKPIDAARRHMNIKDPLPVESKKKRSWVPLEELQLHWTDVLNILKHDLPTELIPDDPKFAL-QSVMDMRERGGSLLKHPEVVFLDVESFALSLAPILNHKTQQR-------GGEGTCIFAERKLEEAWQYDAKEQLVSKGILETRFAVFLWGNDSGDLPHQTFDVLVKLGVLLPLPLRIHTPVDHCFLDQAWENMTSCRNVKEFMVLMRLPQNAPCETLARFNAFNKLREDWGVVAEWEFSLGRTPHGLVERLIASCHYIGNVVRNTCWRRGACFVAHQKAINLAGGSFALSLQFTQSSTSNLRTVGTLVVKAFGNRKGRAVWGALRFVISTVWSLFQEFPGLSWQARMMCPKHE 456
            G   ++P SW +ALVVLDA+               R G +     R      DP    ++      P+ E++   +       +         +P+  L +  ++  +  GSL++H   VFLDV   A  L P+LNH+  +        G  G  +    K + +WQ     +    G+L+   A  LW    GDL       L  LG+   L  R                          +VL+RL +  P       + F +  E    V  W+ S+G  P G VE+++  C  IG +   T WR G     +   +  AG +FA+ ++++   +        + +K +GN    A W AL   IS V  +   FPGL W A + CP+H+
Sbjct:  615 GAALVLPRSWNIALVVLDALGNGRQGSRRFGARDGRRGGRATGTRRGDCREIDPAARWNRGYNMGRPIREMERRRSSSEGRRSNS-------HEPRPRLGRGALNQAQYEGSLVRHETYVFLDVTWLAKILKPLLNHREDEDFFGSLSLGDTGITLDG-HKDKVSWQ-----RFKQTGVLKPELAGLLW---PGDLCDYVLRTLESLGLAHQLDDRF---------------------AGGLVVLLRLGKERPASVGKELDDFRRDHEAIFSVT-WKISMG-VPPGAVEKVLTRCCSIGEL--RTFWRFGVLVQGNMGGVT-AGKTFAMLVEYSHKGSE-------IDIKVYGNIATTAPWAALSLGISAVRVMCSAFPGLRWCASLKCPEHK 958          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9005.16495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K8T1_9PHAE1.670e-3930.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVX5_ECTSI1.830e-3329.72LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JME6_9PHAE6.190e-1624.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9005contigH-elongata_contig9005:2307..4226 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9005.16495.1mRNA_H-elongata_contig9005.16495.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9005 2209..5633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9005.16495.1 ID=prot_H-elongata_contig9005.16495.1|Name=mRNA_H-elongata_contig9005.16495.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=506bp
MPSNILTKLLAWFRRSHSIETILKDVEHLIIKKNEQWENEQSKNKQSSSV
KGPKLACGIQLISSSPACYYENGLADLQERLKTCGEGTRWLIPPSWRLAL
VVLDAVRDGVKPIDAARRHMNIKDPLPVESKKKRSWVPLEELQLHWTDVL
NILKHDLPTELIPDDPKFALQSVMDMRERGGSLLKHPEVVFLDVESFALS
LAPILNHKTQQRGGEGTCIFAERKLEEAWQYDAKEQLVSKGILETRFAVF
LWGNDSGDLPHQTFDVLVKLGVLLPLPLRIHTPVDHCFLDQAWENMTSCR
NVKEFMVLMRLPQNAPCETLARFNAFNKLREDWGVVAEWEFSLGRTPHGL
VERLIASCHYIGNVVRNTCWRRGACFVAHQKAINLAGGSFALSLQFTQSS
TSNLRTVGTLVVKAFGNRKGRAVWGALRFVISTVWSLFQEFPGLSWQARM
MCPKHEGRIIHYLAGPKDIKVSVTASLFVLEILRSLFDTLSSGRPVRETF
RNIFR*
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