prot_H-elongata_contig89999.16488.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig89999.16488.1
Unique Nameprot_H-elongata_contig89999.16488.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig89999.16488.1 vs. uniprot
Match: D7FTN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN6_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 2.090e-27
Identity = 50/58 (86.21%), Postives = 54/58 (93.10%), Query Frame = 0
Query:    8 RQVTFYGPRSEFVASGSDCGHIFIWDKKTAKLEMLLFGDKSGAVNCLEPHPFLPALAT 65
            +QVTFYGPRSEFV SGSDCGHIF W+K +AKLEMLLFGDK GAVNCLEPHP+LPALAT
Sbjct:  508 KQVTFYGPRSEFVVSGSDCGHIFFWNKSSAKLEMLLFGDKVGAVNCLEPHPYLPALAT 565          
BLAST of mRNA_H-elongata_contig89999.16488.1 vs. uniprot
Match: A0A6H5KJD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD8_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 2.860e-27
Identity = 50/58 (86.21%), Postives = 54/58 (93.10%), Query Frame = 0
Query:    8 RQVTFYGPRSEFVASGSDCGHIFIWDKKTAKLEMLLFGDKSGAVNCLEPHPFLPALAT 65
            +QVTFYGPRSEFV SGSDCGHIF W+K +AKLEMLLFGDK GAVNCLEPHP+LPALAT
Sbjct:  553 KQVTFYGPRSEFVVSGSDCGHIFFWNKASAKLEMLLFGDKVGAVNCLEPHPYLPALAT 610          
BLAST of mRNA_H-elongata_contig89999.16488.1 vs. uniprot
Match: A0A0A6YWY2_MOUSE (DDB1- and CUL4-associated factor 8 (Fragment) n=2 Tax=Boreoeutheria TaxID=1437010 RepID=A0A0A6YWY2_MOUSE)

HSP 1 Score: 94.7 bits (234), Expect = 6.620e-23
Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    1 HPSPRFCRQVTFYGPRSEFVASGSDCGHIFIWDKKTAKLEMLLFGDKSGAVNCLEPHPFLPALATRSVG-DARVVVPRREAMQSGTG 86
            H +    + V FYGP+SEFV SGSDCGHIF+W+K + ++   + GDK G VNCLEPHP LP LAT  +  D ++  P  EA    TG
Sbjct:   22 HRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAEASTELTG 108          
BLAST of mRNA_H-elongata_contig89999.16488.1 vs. uniprot
Match: A0A6S7JB47_PARCT (DDB1- and CUL4-associated factor 8 n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JB47_PARCT)

HSP 1 Score: 92.8 bits (229), Expect = 3.770e-22
Identity = 41/68 (60.29%), Postives = 50/68 (73.53%), Query Frame = 0
Query:   10 VTFYGPRSEFVASGSDCGHIFIWDKKTAKLEMLLFGDKSGAVNCLEPHPFLPALATRSVG-DARVVVP 76
            V FYGPRSEFV SGSDCGH+F+WDK+T  +  LL GD +G VNCLEPHP+ P LAT  +  D ++  P
Sbjct:    6 VNFYGPRSEFVVSGSDCGHVFLWDKETESIVQLLEGDVTGVVNCLEPHPYHPFLATSGLDHDVKIWTP 73          
BLAST of mRNA_H-elongata_contig89999.16488.1 vs. uniprot
Match: A0A7J8CRV2_MOLMO (Uncharacterized protein n=1 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8CRV2_MOLMO)

HSP 1 Score: 94.7 bits (234), Expect = 7.480e-22
Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    1 HPSPRFCRQVTFYGPRSEFVASGSDCGHIFIWDKKTAKLEMLLFGDKSGAVNCLEPHPFLPALATRSVG-DARVVVPRREAMQSGTG 86
            H +    + V FYGP+SEFV SGSDCGHIF+W+K + ++   + GDK G VNCLEPHP LP LAT  +  D ++  P  EA    TG
Sbjct:   96 HRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAEASTELTG 182          
BLAST of mRNA_H-elongata_contig89999.16488.1 vs. uniprot
Match: A0A8C0SB23_CANLF (Uncharacterized protein n=6 Tax=Canidae TaxID=9608 RepID=A0A8C0SB23_CANLF)

HSP 1 Score: 96.3 bits (238), Expect = 2.410e-21
Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 0
Query:    1 HPSPRFCRQVTFYGPRSEFVASGSDCGHIFIWDKKTAKLEMLLFGDKSGAVNCLEPHPFLPALATRSVG-DARVVVPRREAMQSGTG 86
            H +    + V FYGPRSEFV SGSDCGHIF+W+K + ++   + GDK G +NCLEPHP+LP +AT  +  +A++  P  EA    TG
Sbjct:  425 HRNNATIKGVNFYGPRSEFVVSGSDCGHIFLWEKSSCQIVQFMEGDKGGTINCLEPHPYLPVMATSGLDHNAKIWAPTAEATTELTG 511          
BLAST of mRNA_H-elongata_contig89999.16488.1 vs. uniprot
Match: A0A2U3Z4L8_LEPWE (DDB1- and CUL4-associated factor 8-like n=2 Tax=Laurasiatheria TaxID=314145 RepID=A0A2U3Z4L8_LEPWE)

HSP 1 Score: 93.2 bits (230), Expect = 3.180e-21
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 0
Query:    1 HPSPRFCRQVTFYGPRSEFVASGSDCGHIFIWDKKTAKLEMLLFGDKSGAVNCLEPHPFLPALATRSVG-DARVVVPRREAMQSGTG 86
            H +    + V FYGP+SEFV SGSDCGHIF+W+K + ++   + GDK G VNCLEPHP LP LAT  +  D ++  P  E     TG
Sbjct:  101 HRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKASCQIVQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAETSTELTG 187          
BLAST of mRNA_H-elongata_contig89999.16488.1 vs. uniprot
Match: A0A5N4C2V8_CAMDR (DDB1-and CUL4-associated factor 8 n=2 Tax=Camelus TaxID=9836 RepID=A0A5N4C2V8_CAMDR)

HSP 1 Score: 95.9 bits (237), Expect = 3.270e-21
Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 0
Query:    1 HPSPRFCRQVTFYGPRSEFVASGSDCGHIFIWDKKTAKLEMLLFGDKSGAVNCLEPHPFLPALATRSVG-DARVVVPRREAMQSGTG 86
            H +    + V FYGPRSEFV SGSDCGHIF+W+K + ++   + GDK G +NCLEPHP+LP +AT  +  DA++  P  +A    TG
Sbjct:  416 HRNNATVKGVNFYGPRSEFVVSGSDCGHIFLWEKSSCQIVQFMEGDKGGTINCLEPHPYLPVMATSGLDHDAKIWAPIAKATNRLTG 502          
BLAST of mRNA_H-elongata_contig89999.16488.1 vs. uniprot
Match: A0A7J8CRU4_MOLMO (Uncharacterized protein n=1 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8CRU4_MOLMO)

HSP 1 Score: 94.7 bits (234), Expect = 3.270e-21
Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    1 HPSPRFCRQVTFYGPRSEFVASGSDCGHIFIWDKKTAKLEMLLFGDKSGAVNCLEPHPFLPALATRSVG-DARVVVPRREAMQSGTG 86
            H +    + V FYGP+SEFV SGSDCGHIF+W+K + ++   + GDK G VNCLEPHP LP LAT  +  D ++  P  EA    TG
Sbjct:  201 HRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAEASTELTG 287          
BLAST of mRNA_H-elongata_contig89999.16488.1 vs. uniprot
Match: UPI000854E315 (DDB1- and CUL4-associated factor 8-like n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854E315)

HSP 1 Score: 92.8 bits (229), Expect = 3.420e-21
Identity = 42/77 (54.55%), Postives = 52/77 (67.53%), Query Frame = 0
Query:    1 HPSPRFCRQVTFYGPRSEFVASGSDCGHIFIWDKKTAKLEMLLFGDKSGAVNCLEPHPFLPALATRSVG-DARVVVP 76
            H +    + V FYGP SEFV SGSDCGHIF+WDK + ++   + GDK G VNCLEPHP LP LAT  +  D +V +P
Sbjct:   87 HRNNATVKGVNFYGPTSEFVVSGSDCGHIFLWDKSSCQIVQFMDGDKGGVVNCLEPHPHLPVLATSGLDYDVKVWLP 163          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89999.16488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTN6_ECTSI2.090e-2786.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJD8_9PHAE2.860e-2786.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0A6YWY2_MOUSE6.620e-2350.57DDB1- and CUL4-associated factor 8 (Fragment) n=2 ... [more]
A0A6S7JB47_PARCT3.770e-2260.29DDB1- and CUL4-associated factor 8 n=3 Tax=Paramur... [more]
A0A7J8CRV2_MOLMO7.480e-2250.57Uncharacterized protein n=1 Tax=Molossus molossus ... [more]
A0A8C0SB23_CANLF2.410e-2149.43Uncharacterized protein n=6 Tax=Canidae TaxID=9608... [more]
A0A2U3Z4L8_LEPWE3.180e-2149.43DDB1- and CUL4-associated factor 8-like n=2 Tax=La... [more]
A0A5N4C2V8_CAMDR3.270e-2149.43DDB1-and CUL4-associated factor 8 n=2 Tax=Camelus ... [more]
A0A7J8CRU4_MOLMO3.270e-2150.57Uncharacterized protein n=1 Tax=Molossus molossus ... [more]
UPI000854E3153.420e-2154.55DDB1- and CUL4-associated factor 8-like n=1 Tax=Na... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..75
e-value: 6.4E-7
score: 30.6
NoneNo IPR availablePANTHERPTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYcoord: 8..68
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 12..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig89999contigH-elongata_contig89999:1458..2427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig89999.16488.1mRNA_H-elongata_contig89999.16488.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig89999 1458..2427 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig89999.16488.1 ID=prot_H-elongata_contig89999.16488.1|Name=mRNA_H-elongata_contig89999.16488.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
HPSPRFCRQVTFYGPRSEFVASGSDCGHIFIWDKKTAKLEMLLFGDKSGA
VNCLEPHPFLPALATRSVGDARVVVPRREAMQSGTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf