prot_H-elongata_contig89892.16481.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig89892.16481.1
Unique Name	prot_H-elongata_contig89892.16481.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	219

Homology

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BLAST of mRNA_H-elongata_contig89892.16481.1 vs. uniprot
Match: A0A6H5JIA4_9PHAE (PHD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA4_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 8.840e-68
Identity = 131/215 (60.93%), Postives = 157/215 (73.02%), Query Frame = 0

Query:    1 QEFIAICAHLPAELKRDLKEVASLNKSTHTLTAQLSREQTEILEKAKGKFRVMTHPEQLASLVDEEALGRTRQKRRKVDECVSEKVGITKRMYDTLDGCIKNIADEVIDRLEKDVKENYGAIPDLSLLAPDATAENELEAAXXXXXXXXXXXXXSQAGAGAAMNXXXXXXXXXVNGSGLRGLVTGADGAARRDDTIAANEPVYCICRQVGWGDMV 215
            QEF+AICAHLP ELK DLK+VA+L++ TH LTA+LSR+Q EILE+AK K+R MT PEQL +L+DE+AL ++RQKRRKVDE VSEKV ITKRMY  LD CIKNI DE ID+LEKDVKE+YGA+PD+  LAP+  AE++  A   XXXXXXXXXX   AG                 G G   L   A GA R +D ++ NEPVYC+CRQVGWGDM+
Sbjct:   39 QEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSRQKRRKVDESVSEKVSITKRMYGALDTCIKNIDDE-IDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTA---XXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAGALXXXAGGAVRSNDLLSTNEPVYCVCRQVGWGDMI 249

[Close]

BLAST of mRNA_H-elongata_contig89892.16481.1 vs. uniprot
Match: D7FVE0_ECTSI (PHD finger protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE0_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 7.230e-64
Identity = 126/215 (58.60%), Postives = 153/215 (71.16%), Query Frame = 0

Query:    1 QEFIAICAHLPAELKRDLKEVASLNKSTHTLTAQLSREQTEILEKAKGKFRVMTHPEQLASLVDEEALGRTRQKRRKVDECVSEKVGITKRMYDTLDGCIKNIADEVIDRLEKDVKENYGAIPDLSLLAPDATAENELEAAXXXXXXXXXXXXXSQAGAGAAMNXXXXXXXXXVNGSGLRGLVTGADGAARRDDTIAANEPVYCICRQVGWGDMV 215
            QEF+AICAHLP ELK DLK+VA+L++ TH LTA+LSR+Q EILE+AK K+R MT PEQL +L+DE+AL ++R+KRRKVDE VSEKV ITKRMY  LD CIKNI DE ID+LEKDVKE+YGA+PD+  LAP+  AE++  A   XXXXXXXXXX   AG                 G G            R +D ++ NEPVYC+CRQVGWGDM+
Sbjct:   30 QEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSREKRRKVDESVSEKVSITKRMYGALDTCIKNIDDE-IDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTA---XXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAXXXXXXXXXXVRGNDLLSTNEPVYCVCRQVGWGDMI 240

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig89892.16481.1 vs. uniprot

BLAST of mRNA_H-elongata_contig89892.16481.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JIA4_9PHAE	8.840e-68	60.93	PHD domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7FVE0_ECTSI	7.230e-64	58.60	PHD finger protein-related n=1 Tax=Ectocarpus sili...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024610	Inhibitor of growth protein, N-terminal histone-binding	PFAM	PF12998	ING	coord: 3..104 e-value: 9.0E-7 score: 29.4
IPR028651	ING family	PANTHER	PTHR10333	INHIBITOR OF GROWTH PROTEIN	coord: 2..122

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig89892	contig	H-elongata_contig89892:695..2478 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig89892.16481.1	mRNA_H-elongata_contig89892.16481.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig89892 695..2478 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig89892.16481.1 ID=prot_H-elongata_contig89892.16481.1|Name=mRNA_H-elongata_contig89892.16481.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp
QEFIAICAHLPAELKRDLKEVASLNKSTHTLTAQLSREQTEILEKAKGKF
RVMTHPEQLASLVDEEALGRTRQKRRKVDECVSEKVGITKRMYDTLDGCI
KNIADEVIDRLEKDVKENYGAIPDLSLLAPDATAENELEAAAAAAVVAAG
GGGGSQAGAGAAMNAVAGAGGGGVNGSGLRGLVTGADGAARRDDTIAANE
PVYCICRQVGWGDMVRER*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024610	ING_N_histone_binding
IPR028651	ING_fam