prot_H-elongata_contig8971.16468.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8971.16468.1
Unique Nameprot_H-elongata_contig8971.16468.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length259
Homology
BLAST of mRNA_H-elongata_contig8971.16468.1 vs. uniprot
Match: A0A6H5KVH9_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVH9_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 4.460e-79
Identity = 132/200 (66.00%), Postives = 162/200 (81.00%), Query Frame = 0
Query:    9 TGDVKYWDSNYGKTLDELEAFISTAEKGSGEARNEALESAANGFRRVTGMKRNYHLEIKLMTEPGSKAHYTTEKSQKDARLTALQTRLDAEQARSGQSKRDELFGGRRDIETGNSGGGAQTAESKLDEADHYQDKTEEAYKNMIGVLQETEQTADGTALELANQREQMNAITQQAIEIDSMLTRADRLVKVFSKRMMTDK 208
            +GDVKYWD++YGKTLD+L+ FI+T E GSG+AR +A+  A+   +R+ GM+R+Y+LEIKL+ +P  KAHY  EKSQKD+R   LQ+R DA +A SG S RDELFGGRRD+E+G + G  ++AE+KL EAD YQDKTE AYKNMIGVLQETE TAD TA+EL NQREQ+  IT+   EIDS+LTRADRLVKVFSKRMMTDK
Sbjct:    3 SGDVKYWDTSYGKTLDQLDGFIATMESGSGDAREDAMSEASRSLKRLAGMRRSYNLEIKLIKDPNMKAHYNLEKSQKDSRYATLQSRFDAAKA-SGDSTRDELFGGRRDVESGEAQG--KSAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDK 199          
BLAST of mRNA_H-elongata_contig8971.16468.1 vs. uniprot
Match: A0A835Z1V1_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V1_9STRA)

HSP 1 Score: 152 bits (385), Expect = 4.940e-42
Identity = 93/201 (46.27%), Postives = 131/201 (65.17%), Query Frame = 0
Query:   10 GDVKYWDSNYGKTLDELEAFISTAEKGSGEARNEA-LESAANGFRRVTGMKRNYHLEIKLMTEPGSKAHYTTEKSQKDARLTALQTRLDAEQARSGQSKRDELFGGRRDIETGNSGGGAQTAESKLDEADHYQDKTEEAYKNMIGVLQETEQTADGTALELANQREQMNAITQQAIEIDSMLTRADRLVKVFSKRMMTDKV 209
            GDVKYWD++YGK LDEL   +  A KG+  A  EA + +A    RR+ GMKR+Y+LEIKLM +   KA Y  EK+ KDA+LT L+ +L+  + +   S +  LF GR   E        +TA+ KLD+A+  Q+KTE  YKN+I VL++TE+    TA  L  QR Q++ IT+  +E+D MLTRA++L+ VFS+R+ TDK+
Sbjct:    2 GDVKYWDTSYGKALDELSDQVK-AVKGASAAEKEAKIATATQTVRRLQGMKRSYNLEIKLMRDATQKASYQEEKNAKDAKLTELEAQLEEAKNKPAGSDKVSLFSGRAAEEPK-----VKTADQKLDQAEIIQNKTEAKYKNIITVLEQTEEVGSATAATLQEQRAQISEITENVMEMDGMLTRANKLIMVFSRRLATDKM 196          
BLAST of mRNA_H-elongata_contig8971.16468.1 vs. uniprot
Match: A0A7S2V573_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V573_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 9.360e-15
Identity = 61/209 (29.19%), Postives = 105/209 (50.24%), Query Frame = 0
Query:   12 VKYWDSNYGKTLDELEAFISTAEKGSGEARNEALESAANGFRRVTGMKRNYHLEIKLMTEPGSKAHYTTEKSQKDARLTALQTRLDAEQARSGQSKRDELFGGRRDIETGNSGGGAQTAESKLDEADHYQDKTEEAYKNMIGVLQETEQTADGTALELANQREQMNAITQQAIEIDSMLTRADRLVKVFSKRMMTDK-VRFIILIPKCI 219
            ++YWD      +D+ E      +  + E   EA +   +  +   G+K+++  E++L+ +   + HY  +  + + R++AL  RL+   +R    K   + G ++    G  G      ++ L +A+  QD  E+AY      L E  Q A  T  EL NQRE++  IT+ A  ID +LTRADRL++ F +RM TD+ ++    I  C+
Sbjct:    1 MEYWDERINSLIDQGEREAEKLDMDN-ETAMEACQEIEHCLQSAKGVKQSFTTELRLLGDKVEEQHYKMKLRRYEERMSALTERLNG--SREAIEKEHLMRGAQQRRGGGGFGDSDDPNDAMLGKAEKLQDDIEDAYGRAENDLDEIRQLAPETLAELRNQREKIQDITETAERIDDLLTRADRLLRTFGRRMATDRLIQVFFFINACL 206          
BLAST of mRNA_H-elongata_contig8971.16468.1 vs. uniprot
Match: W7TW41_9STRA (Soluble nsf attachment protein receptor n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW41_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 5.130e-14
Identity = 59/207 (28.50%), Postives = 110/207 (53.14%), Query Frame = 0
Query:   11 DVKYWDSNYGKTLDELEAFISTAEKGSGEARNEALESAANGFRRVTGMKRNYHLEIKLMTEPGSKAHYTTEKSQK-DARLTALQTRLDAEQARSGQSKRDELFGGRRDIETGNSGGGAQTAESKLDEADHYQDKTEEAYKNMIGVLQETEQTADGTALELANQREQMNAITQQAIEIDSMLTRADRLVKVFSKRMMTDK-VRFIILI 215
            D++YWD      L ELE  I   +   G  +   +  +    +RV  +K+ Y+ E+++  +   + H   EK +  D R+ AL+T L  + A++  +K+  LF G +  +   +     T ++ L EA   QDKTE + ++ +G+++ ++Q    T  E+  Q+EQ+  IT     ++  LTRAD+L++ F +R+ TDK ++F  ++
Sbjct:    3 DIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETEL--KWAKTEANKKS-LFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVL 206          
BLAST of mRNA_H-elongata_contig8971.16468.1 vs. uniprot
Match: A0A7S4A3K9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3K9_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.330e-13
Identity = 54/199 (27.14%), Postives = 106/199 (53.27%), Query Frame = 0
Query:   11 DVKYWDSNYGKTLDELEAFISTAEKGSGEARNEALESAANGFRRVTGMKRNYHLEIKLMTEPGSKAHYTTEKSQKDARLTALQTRLDAEQARSGQSKRDELFGGRRDIETGNSGGGAQTAESKLDEADHYQDKTEEAYKNMIGVLQETEQTADGTALELANQREQMNAITQQAIEIDSMLTRADRLVKVFSKRMMTDKV 209
            D+ YW  +Y  ++D+ +  +++      + R   +++A    +R  G+K++Y LE++L+ +   K +Y     + D R   L+ R++  + R+   +R  L       ET  + G  +  +  LD+A   QDKTE   +    +++ +++    T  EL  Q++Q+  ++   + I+  L+RADRL++ F+KRMMTDK+
Sbjct:   62 DIDYWSDSYRSSIDDADRLVTSLGACEPDERLSIIDAADAKLKRAGGIKKSYKLELRLLRDRELKRNYEESLRELDDRRDELKRRVEEHRERT---ERSTLL-----QETPAAFGEHKGNDYYLDKAHSLQDKTENTLERTTQMIEASKEVGASTLSELERQQDQIKDVSADIMLIEDNLSRADRLIRNFTKRMMTDKL 252          
BLAST of mRNA_H-elongata_contig8971.16468.1 vs. uniprot
Match: F0YKX2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKX2_AURAN)

HSP 1 Score: 73.9 bits (180), Expect = 2.920e-11
Identity = 58/204 (28.43%), Postives = 105/204 (51.47%), Query Frame = 0
Query:   11 DVKYWDSNYGKTLDELEAFISTAEKGSGEARNEALESAANGFRRVTGMKRNYHLEIKLMTEPGSKAHYTTEKSQKDARLTALQTRLDAEQARSGQSKRDELFGGRRDIETGNSGGGAQTAESKLDEADHYQDKTEEAYKNMIGVLQETEQTADGTALE-----LANQREQMNAITQQAIEIDSMLTRADRLVKVFSKRMMTDKV 209
            DV+YW  +Y   +DEL   +S+  + SG    +          R   +K++Y LE++L+ +   K  +  +  + D R   L+  L+ E  R G+++R+ L     D        G    +S L++A   QD+T++A    I +++ +++  + T  E     L +Q+EQ+  I+   + I+  L RAD+L++ F+KRMMTDK+
Sbjct:    4 DVEYWSDSYAGAVDELAVRVSSIRELSGCDFRDIAAECDTKLSRAKSIKKSYCLEMRLLRDQKIKGLHNCKLKELDRRCAELE--LEIEFVRGGRARRELLTSSSVDH------AGCDDNKSCLNDAAILQDQTQDALSRTINLVEASKEVGNSTINEHTILLLEHQQEQVKDISTDVMLIEDNLLRADKLIRNFTKRMMTDKL 199          
BLAST of mRNA_H-elongata_contig8971.16468.1 vs. uniprot
Match: A0A485L062_9STRA (Aste57867_13425 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L062_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 7.540e-11
Identity = 56/203 (27.59%), Postives = 108/203 (53.20%), Query Frame = 0
Query:   11 DVKYWDSNYGKTLDELEAFISTAEKGSGEARNEALESAANGFRRVTGMKRNYHLEIKLMTEPGSKAHYTTEKSQKDARLTALQTRLDAEQARSGQSKRDELFGGRR----DIETGNSGGGAQTAESKLDEADHYQDKTEEAYKNMIGVLQETEQTADGTALELANQREQMNAITQQAIEIDSMLTRADRLVKVFSKRMMTDKV 209
            ++ Y+D +    L++L+  ++   K     R+E L  A    + V  +K+ + L ++ +T+      Y  +     AR+  L TR + + A+S +++R+ LFG  +       TGN+          L++A   Q KTE + KN   +++ +++ A  T   L  QR Q+NAIT++ + +D  +TRA++L++ F++RM TD++
Sbjct:    3 EIAYYDGDLSDALEKLDQIMAKLAKAPPGVRSEVLAEAEKKLKEVIDLKKGFSLALRQVTDREEIKTYREKNDVYAARVEEL-TR-EVKWAKS-ETERNGLFGDAKAKASTAPTGNA--------DMLNKAQELQTKTESSLKNTQKMIESSKEVALATGETLREQRNQLNAITEEVMRMDDGITRANKLMRTFTRRMATDRL 194          
BLAST of mRNA_H-elongata_contig8971.16468.1 vs. uniprot
Match: A0A067BTK0_SAPPC (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BTK0_SAPPC)

HSP 1 Score: 66.2 bits (160), Expect = 3.050e-9
Identity = 57/203 (28.08%), Postives = 102/203 (50.25%), Query Frame = 0
Query:   11 DVKYWDSNYGKTLDELEAFISTAEKGSGEARNEALESAANGFRRVTGMKRNYHLEIKLMTEPGSKAHYTTEKSQKDARLTALQTRLDAEQARSGQSKRDELFGGRR----DIETGNSGGGAQTAESKLDEADHYQDKTEEAYKNMIGVLQETEQTADGTALELANQREQMNAITQQAIEIDSMLTRADRLVKVFSKRMMTDKV 209
            ++ Y+D +  + L  L+  ++   K     R E L  A    + V  +K+ Y L ++ +T+      +  +     AR+  L TR + + A+S +++R+ LFG  +     + TGN           L +A   Q KTE + KN   +++ ++  A  T   L  QR Q+NAIT++ + +D  L RA++L++ F +RM TD+V
Sbjct:    3 EINYYDGDLSEALSTLDGIMARLAKAPPAVRGEVLAEAEKKLKEVIDLKKGYTLALRQVTDREEIKVFREKNDVYAARVEEL-TR-EVKWAKS-ETERNGLFGDAKVNAAKMPTGN--------REMLGKAQEIQTKTEMSLKNTQKMVEASKDVALATGEVLREQRNQINAITEEVMRMDDGLARANKLLRTFGRRMATDRV 194          
BLAST of mRNA_H-elongata_contig8971.16468.1 vs. uniprot
Match: A0A6G0W6N5_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6N5_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 8.490e-9
Identity = 54/199 (27.14%), Postives = 106/199 (53.27%), Query Frame = 0
Query:   11 DVKYWDSNYGKTLDELEAFISTAEKGSGEARNEALESAANGFRRVTGMKRNYHLEIKLMTEPGSKAHYTTEKSQKDARLTALQTRLDAEQARSGQSKRDELFGGRRDIETGNSGGGAQTAESKLDEADHYQDKTEEAYKNMIGVLQETEQTADGTALELANQREQMNAITQQAIEIDSMLTRADRLVKVFSKRMMTDKV 209
            ++ Y+D +    L +L+  ++   K     ++E L  A    + V  +K+ + L ++ +T+      Y  +     AR+  L TR + + A+S +++R+ LFG   D +   S      AE  L++A   Q KTE + KN   +++ +++ A  T   L  QR Q+NAIT++ + +D  + RA++L++ F++RM +D++
Sbjct:    3 EIAYYDGDLSDALTKLDQIMAKLAKAPPGVKSEVLAEAEKKLKEVIDLKKGFSLALRQVTDREDLKTYREKNDVYTARVEEL-TR-EVKWAKS-ETERNGLFG---DAKAKASKAPTGNAEM-LNKAQELQTKTESSLKNTQKMVESSKEVALATGEVLREQRNQLNAITEEVMRMDDGIARANKLMRTFTRRMASDRL 194          
BLAST of mRNA_H-elongata_contig8971.16468.1 vs. uniprot
Match: A0A024TLV5_9STRA (t-SNARE coiled-coil homology domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TLV5_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.150e-8
Identity = 54/203 (26.60%), Postives = 105/203 (51.72%), Query Frame = 0
Query:   11 DVKYWDSNYGKTLDELEAFISTAEKGSGEARNEALESAANGFRRVTGMKRNYHLEIKLMTEPGSKAHYTTEKSQKDARLTALQTRLDAEQARSGQSKRDELFGGRR----DIETGNSGGGAQTAESKLDEADHYQDKTEEAYKNMIGVLQETEQTADGTALELANQREQMNAITQQAIEIDSMLTRADRLVKVFSKRMMTDKV 209
            ++ Y+D +    L +L   ++   K     ++E L  A    + V  +K+ + L ++ +T+      Y  +     AR+  L TR + + A+S ++ R+ LFG  +     + TGN+          L++A   Q KTE + KN   +++ +++ A  T   L  QR Q+NAIT++ + +D  + RA++L++ F++RM TD++
Sbjct:    3 EIAYYDGDLSDALTKLNQIMAKLAKAPPGIKSEVLVEAEKKLKEVIDLKKGFSLALRQVTDREEIKSYREKNDVYAARVEEL-TR-EVKWAKS-ETDRNGLFGDAKAKASKVPTGNT--------DLLNKAQELQGKTEVSLKNTQKMIENSKEVALATGETLREQRNQLNAITEEVMRMDDGVARANKLMRTFTRRMATDRL 194          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8971.16468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KVH9_9PHAE4.460e-7966.00t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z1V1_9STRA4.940e-4246.27Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2V573_9STRA9.360e-1529.19Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TW41_9STRA5.130e-1428.50Soluble nsf attachment protein receptor n=2 Tax=Mo... [more]
A0A7S4A3K9_9STRA2.330e-1327.14Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
F0YKX2_AURAN2.920e-1128.43Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A485L062_9STRA7.540e-1127.59Aste57867_13425 protein n=1 Tax=Aphanomyces stella... [more]
A0A067BTK0_SAPPC3.050e-928.08t-SNARE coiled-coil homology domain-containing pro... [more]
A0A6G0W6N5_9STRA8.490e-927.14t-SNARE coiled-coil homology domain-containing pro... [more]
A0A024TLV5_9STRA1.150e-826.60t-SNARE coiled-coil homology domain-containing pro... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 155..175
NoneNo IPR availableGENE3D1.20.5.110coord: 130..208
e-value: 2.9E-11
score: 45.4
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 20..214
NoneNo IPR availablePANTHERPTHR21230:SF69coord: 20..214
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 129..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8971contigH-elongata_contig8971:6416..9356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8971.16468.1mRNA_H-elongata_contig8971.16468.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8971 6404..9642 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8971.16468.1 ID=prot_H-elongata_contig8971.16468.1|Name=mRNA_H-elongata_contig8971.16468.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=259bp
MARSGGSNTGDVKYWDSNYGKTLDELEAFISTAEKGSGEARNEALESAAN
GFRRVTGMKRNYHLEIKLMTEPGSKAHYTTEKSQKDARLTALQTRLDAEQ
ARSGQSKRDELFGGRRDIETGNSGGGAQTAESKLDEADHYQDKTEEAYKN
MIGVLQETEQTADGTALELANQREQMNAITQQAIEIDSMLTRADRLVKVF
SKRMMTDKVRFIILIPKCIRHSPGCNYSPARARMCSRLMVYFPWCIVTCW
PAPWTAHK*
back to top