prot_H-elongata_contig8949.16448.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8949.16448.1
Unique Nameprot_H-elongata_contig8949.16448.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length147
Homology
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BLAST of mRNA_H-elongata_contig8949.16448.1 vs. uniprot
Match: D8LIE1_ECTSI (Rhodanese Homology Domain superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE1_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 4.130e-38
Identity = 74/106 (69.81%), Postives = 84/106 (79.25%), Query Frame = 0 
Query:   41 GLFDVIVLGGGGGTADAGPDSIYEAEEIETLSLTPAERLDLVLDRRLIKRTGLVLCDPSALVGGQEAVRSLVARAVESKGTVEHARVPGAGPNGGLHVFKWKTYSH 146
            GLFDVI+LGGG G   AG   + E +       TP+ERLDLV+DRRL+KRTGLVLCDP AL GG+ A RS+VARA E KG+VEHARVPGAGP+GGLHVFKWKTYSH
Sbjct:  775 GLFDVILLGGGDGVEGAGSVPVREEDR------TPSERLDLVMDRRLMKRTGLVLCDPQALGGGRAAARSMVARAAEVKGSVEHARVPGAGPSGGLHVFKWKTYSH 874
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BLAST of mRNA_H-elongata_contig8949.16448.1 vs. uniprot
Match: A0A6H5L4H6_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H6_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 2.300e-24
Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 0 
Query:   86 RLIKRTGLVLCDPSALVGGQEAVRSLVARAVESKGTVEHARVPGAGPNGGLHVFKWKTYSH 146
            RL+KRTGLVLCDP AL GG+ A RS+VARA E KG+VEHARVPGAGP+GGLHVFKWKTYSH
Sbjct:  830 RLMKRTGLVLCDPQALGGGRAAARSMVARAAEVKGSVEHARVPGAGPSGGLHVFKWKTYSH 890
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8949.16448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIE1_ECTSI4.130e-3869.81Rhodanese Homology Domain superfamily n=1 Tax=Ecto... [more]
A0A6H5L4H6_9PHAE2.300e-2481.97Rhodanese domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8949contigH-elongata_contig8949:6800..7557 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8949.16448.1mRNA_H-elongata_contig8949.16448.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8949 6189..9612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8949.16448.1 ID=prot_H-elongata_contig8949.16448.1|Name=mRNA_H-elongata_contig8949.16448.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp
MYVLTCDEASVLKHLDQRGGRRSLSEEPDFKTMTLNNFPEGLFDVIVLGG
GGGTADAGPDSIYEAEEIETLSLTPAERLDLVLDRRLIKRTGLVLCDPSA
LVGGQEAVRSLVARAVESKGTVEHARVPGAGPNGGLHVFKWKTYSH*
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