prot_H-elongata_contig89356.16436.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig89356.16436.1
Unique Nameprot_H-elongata_contig89356.16436.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length35
Homology
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BLAST of mRNA_H-elongata_contig89356.16436.1 vs. uniprot
Match: D8LIB3_ECTSI (Amino_oxidase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB3_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 3.170e-10
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0 
Query:    1 GVKKLLSSCAGLGAARPDLRRAMALKSVDVMATRL 35
            GVKKLLSSC GL AARPDLRRAM+L+SVDVMATRL
Sbjct:  303 GVKKLLSSCTGLSAARPDLRRAMSLRSVDVMATRL 337
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89356.16436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIB3_ECTSI3.170e-1088.57Amino_oxidase domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig89356contigH-elongata_contig89356:57..161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig89356.16436.1mRNA_H-elongata_contig89356.16436.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig89356 57..163 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig89356.16436.1 ID=prot_H-elongata_contig89356.16436.1|Name=mRNA_H-elongata_contig89356.16436.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=35bp
GVKKLLSSCAGLGAARPDLRRAMALKSVDVMATRL
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