prot_H-elongata_contig8929.16429.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig8929.16429.1
Unique Name	prot_H-elongata_contig8929.16429.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	96

Homology

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BLAST of mRNA_H-elongata_contig8929.16429.1 vs. uniprot
Match: A0A6H5KUG3_9PHAE (Mitochondrial inner membrane protease subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUG3_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 4.950e-57
Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 0

Query:    2 ALIKRVIAVDGDSVEIKDGSLIVNGEEQFEQYTFEEPEYNWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLVES 95
            ALIKRVIAV GD V+IKDGSL VNG+EQFE YTFEEPEY+WGPQTVPEGMVMVLGDNRNHSLDSHIWGFLP ENVIGRAIFKYWPPWRAG +E+
Sbjct:  118 ALIKRVIAVGGDVVQIKDGSLFVNGQEQFEDYTFEEPEYSWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRAGTIET 211

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BLAST of mRNA_H-elongata_contig8929.16429.1 vs. uniprot
Match: D8LS42_ECTSI (Mitochondrial inner membrane protease subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS42_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 1.530e-56
Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 0

Query:    2 ALIKRVIAVDGDSVEIKDGSLIVNGEEQFEQYTFEEPEYNWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLVES 95
            ALIKRVIAV GD+V+IKDGSL VNG+EQFE YTFEEPEY+WGPQTVPEGMVMVLGDNRNHSLDSHIWGFLP ENVIGRAIFKYWPPWRAG +E+
Sbjct:  191 ALIKRVIAVGGDAVQIKDGSLFVNGQEQFEDYTFEEPEYSWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRAGTIET 284

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BLAST of mRNA_H-elongata_contig8929.16429.1 vs. uniprot
Match: A0A836CAW9_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW9_9STRA)

HSP 1 Score: 155 bits (392), Expect = 9.710e-47
Identity = 66/95 (69.47%), Postives = 80/95 (84.21%), Query Frame = 0

Query:    1 QALIKRVIAVDGDSVEIKDGSLIVNGEEQFEQYTFEEPEYNWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLVES 95
            +ALIKR++AV+GD+V+I+ G + +NG+ Q E +  ++PEY WGP  VP G VMVLGDNRNHSLDSHIWGFLPRENVIGRA+FKYWPPWRAG VE 
Sbjct:   57 EALIKRIVAVEGDTVQIRGGKVYLNGQAQDEPFVTDKPEYEWGPMVVPAGKVMVLGDNRNHSLDSHIWGFLPRENVIGRAVFKYWPPWRAGAVEG 151

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BLAST of mRNA_H-elongata_contig8929.16429.1 vs. uniprot
Match: K8YRM0_NANGC (Mitochondrial inner membrane protease subunit n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRM0_NANGC)

HSP 1 Score: 152 bits (385), Expect = 6.390e-44
Identity = 69/95 (72.63%), Postives = 77/95 (81.05%), Query Frame = 0

Query:    1 QALIKRVIAVDGDSVEIKDGSLIVNGEEQFEQYTFEEPEYNWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLVES 95
            +ALIKR+IA  GD VE+KDG L VNG  Q E+Y  E P Y WGP+ VP+GM MVLGDNRNHSLDSHIWGFLP+EN+IGRAI KYWPPWR GLVE 
Sbjct:  195 EALIKRIIAKGGDVVEVKDGQLFVNGVAQEEKYIAEGPAYVWGPRRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGRAICKYWPPWRLGLVEG 289

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BLAST of mRNA_H-elongata_contig8929.16429.1 vs. uniprot
Match: A0A6T5N089_HETAK (Mitochondrial inner membrane protease subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N089_HETAK)

HSP 1 Score: 151 bits (382), Expect = 1.020e-43
Identity = 68/94 (72.34%), Postives = 80/94 (85.11%), Query Frame = 0

Query:    1 QALIKRVIAVDGDSVEIKDGS-LIVNGEEQFEQYTFEEPEYNWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLV 93
            +ALIKRV+AV GD VEIKDG  L +NGE+Q E+YT E+  Y WGPQTVP+G V+VLGDNRNHSLD H+WGFLP EN+IGRA+FKYWPPWRAG +
Sbjct:  175 EALIKRVVAVAGDVVEIKDGGHLFINGEKQEEKYTNEDALYEWGPQTVPKGCVLVLGDNRNHSLDGHVWGFLPTENIIGRAVFKYWPPWRAGGI 268

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BLAST of mRNA_H-elongata_contig8929.16429.1 vs. uniprot
Match: A0A7S2S8J5_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8J5_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.630e-41
Identity = 67/96 (69.79%), Postives = 81/96 (84.38%), Query Frame = 0

Query:    1 QALIKRVIAVDGDSVEIKDG-SLIVNGEEQFEQYTFEEPEYNWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLVES 95
            +ALIKRV+AV GD VE+KDG +L VNG  Q E +T E+  Y+WGP+ VP GM+MVLGDNRNHSLDSH+WGFLP+ENVIGRA+FKYWP WR GL+E+
Sbjct:  166 EALIKRVVAVAGDVVEMKDGGTLYVNGVPQPEGFTNEKAFYDWGPREVPAGMLMVLGDNRNHSLDSHVWGFLPKENVIGRAVFKYWPVWRLGLIET 261

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BLAST of mRNA_H-elongata_contig8929.16429.1 vs. uniprot
Match: A0A448Z2B4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z2B4_9STRA)

HSP 1 Score: 143 bits (360), Expect = 3.330e-41
Identity = 62/91 (68.13%), Postives = 75/91 (82.42%), Query Frame = 0

Query:    1 QALIKRVIAVDGDSVEIKDGSLIVNGEEQFEQYTFEEPEYNWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAG 91
            +ALIKR++A++GD VE+K G L VNG+EQ E +T E+ EY +GP  VP G V+VLGDNRNHSLD HIWGFLP+ENVIGRA+F YWPPWR G
Sbjct:  108 EALIKRIVAIEGDEVEVKMGKLYVNGDEQDEPFTAEDAEYEFGPVVVPPGNVLVLGDNRNHSLDGHIWGFLPKENVIGRAVFVYWPPWRVG 198

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BLAST of mRNA_H-elongata_contig8929.16429.1 vs. uniprot
Match: A0A7S1E4I6_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E4I6_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.280e-40
Identity = 60/91 (65.93%), Postives = 75/91 (82.42%), Query Frame = 0

Query:    1 QALIKRVIAVDGDSVEIKDGSLIVNGEEQFEQYTFEEPEYNWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAG 91
            +ALIKR++A++GD V+I++G L +NGE Q E +T E+  Y +GP TVP G V+VLGDNRNHSLD HIWGFLP+ENVIGRA+F YWPPWR G
Sbjct:   90 EALIKRIVAIEGDVVKIREGKLYINGEPQDEPFTAEDAAYEFGPVTVPPGQVLVLGDNRNHSLDGHIWGFLPKENVIGRAVFVYWPPWRLG 180

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BLAST of mRNA_H-elongata_contig8929.16429.1 vs. uniprot
Match: A0A7R9WYP6_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WYP6_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.600e-40
Identity = 62/91 (68.13%), Postives = 75/91 (82.42%), Query Frame = 0

Query:    1 QALIKRVIAVDGDSVEIKDGSLIVNGEEQFEQYTFEEPEYNWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAG 91
            +ALIKR++A++GD VE+K G L +NG+ Q E YT E+ EY +GP  VPEG V+VLGDNRNHSLD HIWGFLP+ENVIGRA+F YWPPWR G
Sbjct:  213 EALIKRIVAIEGDQVEVKKGKLYINGDLQNEPYTAEDAEYEFGPVVVPEGAVLVLGDNRNHSLDGHIWGFLPQENVIGRAVFVYWPPWRLG 303

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BLAST of mRNA_H-elongata_contig8929.16429.1 vs. uniprot
Match: B8BZJ0_THAPS (Mitochondrial inner membrane protease subunit (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZJ0_THAPS)

HSP 1 Score: 138 bits (348), Expect = 1.270e-39
Identity = 61/91 (67.03%), Postives = 72/91 (79.12%), Query Frame = 0

Query:    1 QALIKRVIAVDGDSVEIKDGSLIVNGEEQFEQYTFEEPEYNWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAG 91
            +ALIKR++A +GD VE+  G L VNG EQ E +T E+ EY++GP  VP G V+VLGDNRNHSLD HIWGFLP ENVIGRA+F YWPPWR G
Sbjct:   89 EALIKRIVATEGDKVEVMGGKLFVNGVEQEEPFTAEDAEYDFGPVVVPPGNVLVLGDNRNHSLDGHIWGFLPTENVIGRAVFVYWPPWRCG 179

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig8929.16429.1 vs. uniprot

BLAST of mRNA_H-elongata_contig8929.16429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KUG3_9PHAE	4.950e-57	88.30	Mitochondrial inner membrane protease subunit n=1 ...	[more]
D8LS42_ECTSI	1.530e-56	88.30	Mitochondrial inner membrane protease subunit n=1 ...	[more]
A0A836CAW9_9STRA	9.710e-47	69.47	Mitochondrial inner membrane protease subunit n=1 ...	[more]
K8YRM0_NANGC	6.390e-44	72.63	Mitochondrial inner membrane protease subunit n=3 ...	[more]
A0A6T5N089_HETAK	1.020e-43	72.34	Mitochondrial inner membrane protease subunit n=1 ...	[more]
A0A7S2S8J5_9STRA	1.630e-41	69.79	Mitochondrial inner membrane protease subunit n=1 ...	[more]
A0A448Z2B4_9STRA	3.330e-41	68.13	Mitochondrial inner membrane protease subunit n=1 ...	[more]
A0A7S1E4I6_9STRA	2.280e-40	65.93	Mitochondrial inner membrane protease subunit n=1 ...	[more]
A0A7R9WYP6_9STRA	2.600e-40	68.13	Mitochondrial inner membrane protease subunit n=1 ...	[more]
B8BZJ0_THAPS	1.270e-39	67.03	Mitochondrial inner membrane protease subunit (Fra...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000223	Peptidase S26A, signal peptidase I	PRINTS	PR00727	LEADERPTASE	coord: 47..66 score: 54.52 coord: 3..15 score: 51.65
IPR000223	Peptidase S26A, signal peptidase I	TIGRFAM	TIGR02227	TIGR02227	coord: 2..86 e-value: 4.4E-25 score: 86.4
None	No IPR available	GENE3D	2.10.109.10		coord: 1..92 e-value: 9.6E-27 score: 95.4
None	No IPR available	PANTHER	PTHR43390	FAMILY NOT NAMED	coord: 2..91
None	No IPR available	PANTHER	PTHR43390:SF9	CHLOROPLAST PROCESSING PEPTIDASE	coord: 2..91
IPR019533	Peptidase S26	PFAM	PF10502	Peptidase_S26	coord: 3..80 e-value: 7.2E-11 score: 42.0
IPR019758	Peptidase S26A, signal peptidase I, conserved site	PROSITE	PS00761	SPASE_I_3	coord: 52..65
IPR036286	LexA/Signal peptidase-like superfamily	SUPERFAMILY	51306	LexA/Signal peptidase	coord: 2..93

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig8929	contig	H-elongata_contig8929:6389..7458 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig8929.16429.1	mRNA_H-elongata_contig8929.16429.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig8929 6389..7458 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig8929.16429.1 ID=prot_H-elongata_contig8929.16429.1|Name=mRNA_H-elongata_contig8929.16429.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
QALIKRVIAVDGDSVEIKDGSLIVNGEEQFEQYTFEEPEYNWGPQTVPEG
MVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLVES*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000223	Pept_S26A_signal_pept_1
IPR019533	Peptidase_S26
IPR019758	Pept_S26A_signal_pept_1_CS
IPR036286	LexA/Signal_pep-like_sf