prot_H-elongata_contig89145.16417.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig89145.16417.1
Unique Nameprot_H-elongata_contig89145.16417.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length121
Homology
BLAST of mRNA_H-elongata_contig89145.16417.1 vs. uniprot
Match: A0A6U3Q8H2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q8H2_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.420e-6
Identity = 41/128 (32.03%), Postives = 59/128 (46.09%), Query Frame = 0
Query:    1 MVNICEMLLEKGVD-------VEAMSEDGFNALIAGASEGHATVVELLLEKGKANPNAKDKLPFAVDVSLICLSSAGCLFLLYTLKDGTTALMGASVRGHKEVVDVLLAHRANVDQQNGGGHTALMFA 121
            M ++ + LL++  D       V++ S++G   LIA ASEGH  VV+LL+++ KA+ +AKDK                         D T +                LA  A V++QN  GHTALMFA
Sbjct:  711 MADVVKALLKRHKDAGGKEGYVDSPSDEGITPLIAAASEGHVEVVKLLIDEAKADVDAKDK-------------------------DETNSXXXXXXXXXXXXXXXXLAAGAKVNEQNVDGHTALMFA 813          
BLAST of mRNA_H-elongata_contig89145.16417.1 vs. uniprot
Match: UPI001F09FFB2 (ankyrin repeat domain-containing protein n=3 Tax=Ralstonia solanacearum TaxID=305 RepID=UPI001F09FFB2)

HSP 1 Score: 54.7 bits (130), Expect = 2.220e-6
Identity = 40/130 (30.77%), Postives = 63/130 (48.46%), Query Frame = 0
Query:    2 VNICEMLLEKGVDVEAMSEDGFNALIAGASEGHATVVELLLEKGKANPNAKDKLPFAVDVSLICLSSAGCLFLLYTLKD----------GTTALMGASVRGHKEVVDVLLAHRANVDQQNGGGHTALMFA 121
            +N   +LL+KG   +  +  G   L A    G A+   +LL++G   P    K P+ +  + +    A  + L+  L+D          G TAL  A+  G+ E+V +LLA  A++DQ+N  G TAL  A
Sbjct:   97 LNAMRVLLDKGAQRDKPTGSGETPLEAAVLNGQASAACMLLQRGARLPPPAQK-PYLLPAAALTEDFASAVTLVAILRDHDFDPNARMNGDTALHIATELGNVELVRLLLARGASIDQKNSRGETALSIA 225          
BLAST of mRNA_H-elongata_contig89145.16417.1 vs. uniprot
Match: V6DF63_9BACT (Ankyrin repeats containing protein n=1 Tax=Candidatus Babela massiliensis TaxID=673862 RepID=V6DF63_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 2.310e-6
Identity = 40/131 (30.53%), Postives = 72/131 (54.96%), Query Frame = 0
Query:    2 VNICEMLLEKGVDVEAMSEDGFNALIAGASEGHATVVELLLEKGKANPNAKDKLPFAVDVSLIC-LSSAGCLFLL------YTLKD---GTTALMGASVRGHKEVVDVLLAHR-ANVDQQNGGGHTALMFA 121
            +N+ ++L++ G D+E  +++G NAL+  A   H  +V+LLL++G AN NA +   ++  + L C + S   L +       + LKD       LM A     K+ V+ +++    ++D+Q+  G TALM+A
Sbjct:  184 LNLIDILIDYGADIEYKNKNGNNALMFAAWSNHDHIVKLLLKRG-ANINAINNYQYSALLGLFCSIDSTNMLNIFKMGKADFALKDPEGNYNVLMLAIFDNCKKSVEFIVSQNLVDIDEQDSKGFTALMYA 313          
BLAST of mRNA_H-elongata_contig89145.16417.1 vs. uniprot
Match: A0A7S0M2Z9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M2Z9_9CRYP)

HSP 1 Score: 49.7 bits (117), Expect = 3.310e-5
Identity = 34/114 (29.82%), Postives = 53/114 (46.49%), Query Frame = 0
Query:    8 LLEKGVDVEAMSEDGFNALIAGASEGHATVVELLLEKGKANPNAKDKLPFAVDVSLICLSSAGCLFLLYTLKDGTTALMGASVRGHKEVVDVLLAHRANVDQQNGGGHTALMFA 121
            L + GV      E+G++ LI  +  GH   V+ L+ KG ANPN+ D                             TA+  A++ GH+E++ +LL+H+A+    + GG T LM A
Sbjct:   20 LSQHGVSPNVRDENGWSPLIMASKNGHVETVKCLIAKG-ANPNSPDI--------------------------SHTAIRAAALFGHREIIRLLLSHKADPCAISLGGRTPLMGA 106          
BLAST of mRNA_H-elongata_contig89145.16417.1 vs. uniprot
Match: T0RL16_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RL16_SAPDV)

HSP 1 Score: 51.2 bits (121), Expect = 6.120e-5
Identity = 38/128 (29.69%), Postives = 58/128 (45.31%), Query Frame = 0
Query:    4 ICEMLLEKGVDVEAMSEDGFNALIAGASEGHATVVELLLEKGK---ANPNAKDKLPFAVDVSLICLSSAGCLFLL-------YTLKDGTTALMGASVRGHKEVVDVLLAHRANVDQQNGGGHTALMFA 121
            + + L++ G   EA   +G   L+   S  H   +E+LL +        +   + P    V+   L +A  L  L         L DG T L  A+ RG  E+V +LLAH AN+D  +  G T +M+A
Sbjct: 1043 LIDYLIDHGAWQEARDSNGETPLLLATSLNHVDCIEVLLRRAADVHVVSSMTHETPIMTAVAANFLEAAHLLLGLGRCSPHATDLNDGATLLHDAAARGFVEMVQLLLAHGANIDAVDVDGSTPIMYA 1170          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89145.16417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6U3Q8H2_9STRA1.420e-632.03Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
UPI001F09FFB22.220e-630.77ankyrin repeat domain-containing protein n=3 Tax=R... [more]
V6DF63_9BACT2.310e-630.53Ankyrin repeats containing protein n=1 Tax=Candida... [more]
A0A7S0M2Z9_9CRYP3.310e-529.82Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
T0RL16_SAPDV6.120e-529.69Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 80..109
e-value: 0.015
score: 24.5
coord: 21..51
e-value: 0.036
score: 23.2
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 21..54
e-value: 3.8E-4
score: 20.8
coord: 80..111
e-value: 1.9E-5
score: 24.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 80..112
score: 11.033
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..57
e-value: 2.0E-12
score: 49.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 58..121
e-value: 2.8E-10
score: 42.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..121
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 3..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..121
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..54
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..121
score: 18.802

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig89145contigH-elongata_contig89145:1218..1619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig89145.16417.1mRNA_H-elongata_contig89145.16417.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig89145 1203..1619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig89145.16417.1 ID=prot_H-elongata_contig89145.16417.1|Name=mRNA_H-elongata_contig89145.16417.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp
MVNICEMLLEKGVDVEAMSEDGFNALIAGASEGHATVVELLLEKGKANPN
AKDKLPFAVDVSLICLSSAGCLFLLYTLKDGTTALMGASVRGHKEVVDVL
LAHRANVDQQNGGGHTALMFA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom