prot_H-elongata_contig89006.16410.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig89006.16410.1
Unique Nameprot_H-elongata_contig89006.16410.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length41
Homology
BLAST of mRNA_H-elongata_contig89006.16410.1 vs. uniprot
Match: A0A6H5K9J2_9PHAE (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J2_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 9.360e-14
Identity = 31/37 (83.78%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    4 IYHEKQHLMHCAVHTLNNLFQEQWATASLLEDISKEL 40
            ++HEKQ+LMHCAVHTLNNLFQE WATASL+EDI+KEL
Sbjct:    6 MFHEKQYLMHCAVHTLNNLFQESWATASLMEDIAKEL 42          
BLAST of mRNA_H-elongata_contig89006.16410.1 vs. uniprot
Match: D7FI75_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI75_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 1.380e-6
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    4 IYHEKQHLMHCAVHTLNNLFQEQWATASLLEDISKEL 40
            +YHE+Q LM CA+H LNNLFQE WA   L+E ++ EL
Sbjct:    1 MYHERQRLMQCAMHALNNLFQEPWANRELMERLALEL 37          
BLAST of mRNA_H-elongata_contig89006.16410.1 vs. uniprot
Match: A0A183J0H5_9BILA (NudC domain-containing protein 1 n=1 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183J0H5_9BILA)

HSP 1 Score: 48.9 bits (115), Expect = 1.740e-5
Identity = 22/35 (62.86%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    4 IYHEKQHLMHCAVHTLNNLFQEQWATASLLEDISK 38
            IYHEKQH   CAVHTLNNLFQE+  +   L++IS+
Sbjct:  607 IYHEKQHFQFCAVHTLNNLFQERLFSKRCLDEISE 641          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89006.16410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K9J2_9PHAE9.360e-1483.78Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI75_ECTSI1.380e-659.46Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A183J0H5_9BILA1.740e-562.86NudC domain-containing protein 1 n=1 Tax=Soboliphy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006155Josephin domainPFAMPF02099Josephincoord: 9..40
e-value: 4.3E-6
score: 26.9
IPR006155Josephin domainPROSITEPS50957JOSEPHINcoord: 1..40
score: 14.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig89006contigH-elongata_contig89006:477..599 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig89006.16410.1mRNA_H-elongata_contig89006.16410.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig89006 477..617 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig89006.16410.1 ID=prot_H-elongata_contig89006.16410.1|Name=mRNA_H-elongata_contig89006.16410.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=41bp
MAGIYHEKQHLMHCAVHTLNNLFQEQWATASLLEDISKEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006155Josephin