prot_H-elongata_contig88951.16403.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88951.16403.1
Unique Nameprot_H-elongata_contig88951.16403.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length112
Homology
BLAST of mRNA_H-elongata_contig88951.16403.1 vs. uniprot
Match: A0A6H5JAT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT0_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 5.910e-23
Identity = 47/106 (44.34%), Postives = 67/106 (63.21%), Query Frame = 0
Query:    3 QVFTMYSAHLKGDWNGVMLALSVKDGNNCVVHVATAITKKEGGPSYEYLLGNAKRNTKLGEWITRETTTCITDGHKGLDYALPKLVPLAESRRCVHHLLKNVPAVG 108
            QV  M  AH+KG+WNG + A++ K  +N +VH+AT I  KE G +Y YL+ NA +N  +  ++ + +TT ITD HKG + A+P  +  AE   C  H+LKN  AVG
Sbjct:  203 QVLCMDFAHMKGEWNGTIGAMTTKSSDNTIVHLATCIVAKENGNAYRYLIDNALKNPTVAAFLKKPSTTIITDKHKGSESAVPDGLDEAEYLTCAEHMLKNCGAVG 308          
BLAST of mRNA_H-elongata_contig88951.16403.1 vs. uniprot
Match: A0A6H5L4I0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I0_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 4.970e-21
Identity = 48/106 (45.28%), Postives = 60/106 (56.60%), Query Frame = 0
Query:    3 QVFTMYSAHLKGDWNGVMLALSVKDGNNCVVHVATAITKKEGGPSYEYLLGNAKRNTKLGEWITRETTTCITDGHKGLDYALPKLVPLAESRRCVHHLLKNVPAVG 108
            QVF M +A     WNG   A+S KD NN ++HVAT +  KE    Y  LL  A +  +L   +    TTC TD HKG D A+PK+ PL E RRCV HL + V  +G
Sbjct:  228 QVFAMDAAAFHDVWNGQFGAISFKDANNKIIHVATMVQAKENAAMYTELLTRAMQFPELKTILNNVNTTCFTDKHKGSDAAVPKICPLTEHRRCVEHLTRTVGCIG 333          
BLAST of mRNA_H-elongata_contig88951.16403.1 vs. uniprot
Match: UPI000CD7FC1A (uncharacterized protein LOC111919800 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD7FC1A)

HSP 1 Score: 58.5 bits (140), Expect = 9.720e-8
Identity = 29/95 (30.53%), Postives = 49/95 (51.58%), Query Frame = 0
Query:    9 SAHLKGDWNGVMLALSVKDGNNCVVHVATAITKKEGGPSYEYLLGNAKRNTKLGEWITRETTTCITDGHKGLDYALPKLVPLAESRRCVHHLLKN 103
            + HLKG +NGV++A +  DGNN +  +   + K E   S+ + L + K+  ++   +        +D  KGL+ A+  + P  E R C+ HL  N
Sbjct:  131 ACHLKGKFNGVLVAATGIDGNNSIFPITYCVLKSEKTQSWPWFLNSLKKAIRMPNGLV-----ISSDMQKGLEVAIMNVYPNVEHRECIRHLYSN 220          
BLAST of mRNA_H-elongata_contig88951.16403.1 vs. uniprot
Match: UPI001652E71E (uncharacterized protein LOC110893254 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI001652E71E)

HSP 1 Score: 58.2 bits (139), Expect = 1.200e-7
Identity = 33/95 (34.74%), Postives = 50/95 (52.63%), Query Frame = 0
Query:    9 SAHLKGDWNGVMLALSVKDGNNCVVHVATAITKKEGGPSYEYLLGNAKRNTKLGEWITRETTTCITDGHKGLDYALPKLVPLAESRRCVHHLLKN 103
            + HLKG +NGV++A +  DGNN +  VA  + + E   S+ + L   K+   +G   T       +D  KGLD A+ ++ P  E R C+ HL  N
Sbjct:  180 ACHLKGKFNGVLVAANSVDGNNSIFPVAYGVLESENKNSWIWFLELLKK--AIG---TPNGLVISSDMQKGLDIAITQVYPNVEHRECIRHLFSN 269          
BLAST of mRNA_H-elongata_contig88951.16403.1 vs. uniprot
Match: UPI001652F7B6 (uncharacterized protein LOC110937514 n=2 Tax=Helianthus annuus TaxID=4232 RepID=UPI001652F7B6)

HSP 1 Score: 58.2 bits (139), Expect = 1.610e-7
Identity = 33/95 (34.74%), Postives = 50/95 (52.63%), Query Frame = 0
Query:    9 SAHLKGDWNGVMLALSVKDGNNCVVHVATAITKKEGGPSYEYLLGNAKRNTKLGEWITRETTTCITDGHKGLDYALPKLVPLAESRRCVHHLLKN 103
            + HLKG +NGV++A +  DGNN +  VA  + + E   S+ + L   K+   +G   T       +D  KGLD A+ ++ P  E R C+ HL  N
Sbjct:  394 ACHLKGKFNGVLVAANSVDGNNSIFPVAYGVLESENKNSWIWFLELLKK--AIG---TPNGLVISSDMQKGLDIAITQVYPNVEHRECIRHLFSN 483          
BLAST of mRNA_H-elongata_contig88951.16403.1 vs. uniprot
Match: A0A5N6Q553_9ASTR (SWIM-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6Q553_9ASTR)

HSP 1 Score: 55.5 bits (132), Expect = 1.410e-6
Identity = 34/103 (33.01%), Postives = 55/103 (53.40%), Query Frame = 0
Query:    9 SAHLKGDWNGVMLALSVKDGNNCVVHVATAITKKEGGPSYEYLLGNAKRNTKLGEWITRETTTCITDGHKGLDYALPKLVPLAESRRCVHHLLKNVPAVGSVS 111
            + HLKG +NGV++A +  DGNN +  VA  + + E   S+ + L   K+   +G   T +     +D  KGL+ A+ ++ P  E R C+ HL  N  A+  +S
Sbjct:  381 ACHLKGKFNGVLVAATSVDGNNSIFPVAYGVLESENKNSWIWFLELLKK--AIG---TPDGLVISSDMQKGLEVAITQIYPNVEHRECMRHL-SNKQALAYIS 477          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88951.16403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JAT0_9PHAE5.910e-2344.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4I0_9PHAE4.970e-2145.28SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI000CD7FC1A9.720e-830.53uncharacterized protein LOC111919800 n=1 Tax=Lactu... [more]
UPI001652E71E1.200e-734.74uncharacterized protein LOC110893254 n=1 Tax=Helia... [more]
UPI001652F7B61.610e-734.74uncharacterized protein LOC110937514 n=2 Tax=Helia... [more]
A0A5N6Q553_9ASTR1.410e-633.01SWIM-type domain-containing protein n=1 Tax=Mikani... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 5..103
e-value: 2.3E-10
score: 40.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88951contigH-elongata_contig88951:80..415 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88951.16403.1mRNA_H-elongata_contig88951.16403.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88951 80..415 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88951.16403.1 ID=prot_H-elongata_contig88951.16403.1|Name=mRNA_H-elongata_contig88951.16403.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bp
MGQVFTMYSAHLKGDWNGVMLALSVKDGNNCVVHVATAITKKEGGPSYEY
LLGNAKRNTKLGEWITRETTTCITDGHKGLDYALPKLVPLAESRRCVHHL
LKNVPAVGSVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018289MULE_transposase_dom