prot_H-elongata_contig8887.16396.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig8887.16396.1 vs. uniprot
Match: D7G075_ECTSI (DNA-directed RNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G075_ECTSI) HSP 1 Score: 476 bits (1224), Expect = 2.310e-166 Identity = 233/244 (95.49%), Postives = 237/244 (97.13%), Query Frame = 0
Query: 1 VGDKFSSRHGQKGVCGIIVPQVDMPFSDAGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLNGHLAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHM----MHARARGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 240
VGDKFSSRHGQKGVCGIIVPQ DMPF+D+GICPDLIMNPHGFPSRMTVGKMVELVAGKAGVL+GH AYGTAFGEE GSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHM MHARARGPRAVLTRQPTEGRS+DGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF
Sbjct: 208 VGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 451
BLAST of mRNA_H-elongata_contig8887.16396.1 vs. uniprot
Match: A0A812TJY5_SYMMI (DNA-directed RNA polymerase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TJY5_SYMMI) HSP 1 Score: 414 bits (1063), Expect = 6.280e-144 Identity = 198/244 (81.15%), Postives = 218/244 (89.34%), Query Frame = 0
Query: 1 VGDKFSSRHGQKGVCGIIVPQVDMPFSDAGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLNGHLAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHM----MHARARGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 240
VGDKFSSRHGQKGVCGIIV Q DMPFS+ G+CPDLIMNPHGFPSRMTVGKM+ELVAGKAGV G YGTAFGEEFG+AD+V + C+ LV+ GYSYVGKD++TSG GEPL +YIFAGPVFYQKLKHM MHAR+RGPRAVLTRQPTEGRS+DGGLRLGEMERDCLIGYGAS L+MERLMISSDAFTANVC+GCG+LGY GWCQ CR+ +KM++IRLPYACKLLFQELQSMNI RL LQDF
Sbjct: 72 VGDKFSSRHGQKGVCGIIVNQEDMPFSETGVCPDLIMNPHGFPSRMTVGKMIELVAGKAGVFEGRQGYGTAFGEEFGNADKVEVACETLVKHGYSYVGKDIMTSGITGEPLQSYIFAGPVFYQKLKHMVMDKMHARSRGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASNLVMERLMISSDAFTANVCEGCGMLGYEGWCQGCRNGDKMSNIRLPYACKLLFQELQSMNIATRLHLQDF 315
BLAST of mRNA_H-elongata_contig8887.16396.1 vs. uniprot
Match: A0A835Z565_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z565_9STRA) HSP 1 Score: 423 bits (1088), Expect = 2.540e-137 Identity = 203/244 (83.20%), Postives = 222/244 (90.98%), Query Frame = 0
Query: 1 VGDKFSSRHGQKGVCGIIVPQVDMPFSDAGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLNGHLAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHM----MHARARGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 240
VGDKFSSRHGQKGVCGIIVPQ DMPFS+ GICPDLIMNPHGFPSRMTVGKM+EL+AGKAGVL+GH AYGTAFGEEFG+AD+V CQALV+RG+SY GKD+L SG GEP++NYIFAGPVFYQKLKHM MHARARGPRA LTRQPTEGRS+DGGLRLGEMERDCLIGYGASALIMERLMISSDAFTA VC+GCGLLGY GWCQ CR P+ M+ I +PYACKLLFQELQSMNIVPRL+LQ++
Sbjct: 938 VGDKFSSRHGQKGVCGIIVPQADMPFSEMGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLHGHQAYGTAFGEEFGNADKVTDICQALVDRGFSYCGKDILMSGINGEPVLNYIFAGPVFYQKLKHMVMDKMHARARGPRATLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTAYVCEGCGLLGYQGWCQGCRRPDSMSSISVPYACKLLFQELQSMNIVPRLRLQEY 1181
BLAST of mRNA_H-elongata_contig8887.16396.1 vs. uniprot
Match: M4C4I9_HYAAE (DNA-directed RNA polymerase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4I9_HYAAE) HSP 1 Score: 387 bits (995), Expect = 1.130e-133 Identity = 185/244 (75.82%), Postives = 212/244 (86.89%), Query Frame = 0
Query: 1 VGDKFSSRHGQKGVCGIIVPQVDMPFSDAGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLNGHLAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHM----MHARARGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 240
+GDKFSSRHGQKGVCG I Q DMPF+D GICPDLIMNPHGFPSRMTVGKM+EL+AGKAGVL G AYGTAFGE++GSAD V C + LV+ G++Y GKD LTSG GEP+ YIF GP++YQKLKHM MHARARGPRAVLTRQPTEGRS+DGGLRLGEMERDCLIGYGAS L+MERLM+SSDAF+A+VCQGC +LGY GWCQ+C+S EK+ IR+PYACKLLFQELQ+MNIVPRL L+++
Sbjct: 66 IGDKFSSRHGQKGVCGTIRNQEDMPFNDQGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLTGRRAYGTAFGEKYGSADHVLDCSRELVKNGFNYAGKDYLTSGITGEPIECYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMLSSDAFSADVCQGCRMLGYEGWCQHCKSEEKVVSIRIPYACKLLFQELQAMNIVPRLTLKEY 309
BLAST of mRNA_H-elongata_contig8887.16396.1 vs. uniprot
Match: I2CNY0_NANGC (DNA-directed RNA polymerase subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CNY0_NANGC) HSP 1 Score: 411 bits (1056), Expect = 1.700e-132 Identity = 198/244 (81.15%), Postives = 219/244 (89.75%), Query Frame = 0
Query: 1 VGDKFSSRHGQKGVCGIIVPQVDMPFSDAGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLNGHLAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHM----MHARARGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 240
VGDKFSSRHGQKGVCGIIV Q DMPF+D GICPDLIMNPHGFPSRMTVGK++E VAGKA V+ G AYGTAFGE+FGSADRV C ALVE G+SYVGK+++TSGT GEPL+ YIF GPVFYQKLKHM MHARARGPRAVLTRQPTEGRS+DGGLRLGEMERDCLIGYGAS+L+ ERLMISSDAFTA VC+ CGLLGY+GWCQ+CRS E+MADIRLPYACKLLFQELQSMN++P+LKL +F
Sbjct: 954 VGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLMEF 1197
BLAST of mRNA_H-elongata_contig8887.16396.1 vs. uniprot
Match: A0A7S2GFG3_9STRA (DNA-directed RNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GFG3_9STRA) HSP 1 Score: 379 bits (974), Expect = 1.090e-130 Identity = 185/247 (74.90%), Postives = 209/247 (84.62%), Query Frame = 0
Query: 1 VGDKFSSRHGQKGVCGIIVPQVDMPFSDAGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLNGHLAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHM----MHARARGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSG----WCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQD 239
VGDKF+SRHGQKGVCG+IV Q ++PF++ GICPDLIMNPHGFPSRMTVGK++ELV GKAGV+NGH Y TAFGE+FG+AD+V Q LV G+SYV KDMLTSG GEPL YIF GPVFYQKLKHM MHARARGPRAVLTRQPTEGRS+DGGLRLGEMERDCL+GYGA+ALI ERLM SSDAFTA+VC+ C L+GY G WCQNCRS E M D++LPYACKLLFQELQSMNI P+L L++
Sbjct: 48 VGDKFASRHGQKGVCGLIVNQENLPFNETGICPDLIMNPHGFPSRMTVGKIIELVVGKAGVMNGHQGYATAFGEDFGNADKVVEASQELVRHGFSYVAKDMLTSGITGEPLSAYIFMGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLVGYGAAALISERLMTSSDAFTAHVCKKCNLIGYLGEKGMWCQNCRSAENMTDMKLPYACKLLFQELQSMNITPKLHLEE 294
BLAST of mRNA_H-elongata_contig8887.16396.1 vs. uniprot
Match: A0A7S3H3I2_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3I2_9STRA) HSP 1 Score: 402 bits (1033), Expect = 1.850e-130 Identity = 194/244 (79.51%), Postives = 214/244 (87.70%), Query Frame = 0
Query: 1 VGDKFSSRHGQKGVCGIIVPQVDMPFSDAGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLNGHLAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHM----MHARARGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 240
VGDKFSSRHGQKGVCG+I+ Q DMPFS+ GICPDLIMNPHGFPSRMTVGKM+ELV+GKA V G YG+AFGEEFG+ADRV + C LV+ GYSYVGKD+LTSG GEPL +Y+F GPVFYQKLKHM MHARA+GPRAVLTRQPTEGRS+DGGLRLGEMERDCLIGYGAS LIMERLMISSDAFTANVC+ CGLLGY GWCQ CRS +K++ IRLPYACKLLFQELQSMNI RL+LQD+
Sbjct: 795 VGDKFSSRHGQKGVCGLILNQEDMPFSERGICPDLIMNPHGFPSRMTVGKMIELVSGKAAVFEGRQGYGSAFGEEFGNADRVEVSCATLVKHGYSYVGKDILTSGITGEPLESYVFMGPVFYQKLKHMVMDKMHARAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASNLIMERLMISSDAFTANVCENCGLLGYEGWCQRCRSGDKVSSIRLPYACKLLFQELQSMNIATRLRLQDY 1038
BLAST of mRNA_H-elongata_contig8887.16396.1 vs. uniprot
Match: A0A7S1V8C7_9STRA (DNA-directed RNA polymerase n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V8C7_9STRA) HSP 1 Score: 377 bits (967), Expect = 9.080e-128 Identity = 184/243 (75.72%), Postives = 205/243 (84.36%), Query Frame = 0
Query: 1 VGDKFSSRHGQKGVCGIIVPQVDMPFSDAGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLNGHLAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMM----HARARGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQD 239
VGDKF+SRHGQKGVCG+IVPQ DMPF++ GI PDLIMNPHGFPSRMTVGK++EL+ GKAGV G AYG+AFGEE GSAD +AL+ G +Y GKD++ SGT GEPL YIF GPVFYQKLKHM+ HARARGPRAVLTRQPTEGRS+DGGLRLGEMERDCLI YGAS LIMERLM SSDAF+ANVC CGLL Y WCQ CRS EK+ADIRLPYACKLLFQELQSMN++PRL+L+D
Sbjct: 178 VGDKFASRHGQKGVCGLIVPQADMPFNEFGISPDLIMNPHGFPSRMTVGKLLELLVGKAGVYEGRQAYGSAFGEEHGSADTAEAASEALIRNGLNYTGKDVMYSGTSGEPLNAYIFQGPVFYQKLKHMVLDKAHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASNLIMERLMHSSDAFSANVCMTCGLLQYENWCQYCRSGEKVADIRLPYACKLLFQELQSMNVLPRLRLRD 420
BLAST of mRNA_H-elongata_contig8887.16396.1 vs. uniprot
Match: A0A6U4JF41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JF41_9STRA) HSP 1 Score: 394 bits (1013), Expect = 1.320e-126 Identity = 192/241 (79.67%), Postives = 210/241 (87.14%), Query Frame = 0
Query: 1 VGDKFSSRHGQKGVCGIIVPQVDMPFSDAGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLNGHLAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHM----MHARARGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKL 237
VGDKFSSRHGQKGVCGIIVPQ DMPF++ GICPDLIMNPHGFPSRMTVGKM+EL+ GKAGVL G AYGTAFGE+FG+ADRV + LV G+SY GKD+LTSGT GE + +YIF GPVFYQKLKHM MHARARGPRAVLTRQPTEGRS+DGGLRLGEMERDCLIGYGAS LIMERLM+SSD FTA VC+ CGLL GWCQNCRS E +AD+RLPYACKLLFQELQSMNI+PRL+L
Sbjct: 902 VGDKFSSRHGQKGVCGIIVPQEDMPFNNDGICPDLIMNPHGFPSRMTVGKMIELLTGKAGVLRGRQAYGTAFGEDFGNADRVQFASEELVRHGFSYYGKDILTSGTSGEQICSYIFMGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASNLIMERLMLSSDQFTATVCEKCGLLQRPGWCQNCRSDEAIADVRLPYACKLLFQELQSMNIIPRLRL 1142
BLAST of mRNA_H-elongata_contig8887.16396.1 vs. uniprot
Match: A0A7S3DSU4_9STRA (DNA-directed RNA polymerase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DSU4_9STRA) HSP 1 Score: 366 bits (939), Expect = 1.030e-125 Identity = 178/243 (73.25%), Postives = 200/243 (82.30%), Query Frame = 0
Query: 1 VGDKFSSRHGQKGVCGIIVPQVDMPFSDAGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLNGHLAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMM----HARARGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQD 239
+GDKF+SRHGQKGVCG+IVP+ D+PF++ G PDLIMNPHGFPSRMTVGK++EL+ GKA V G Y TAFGEEFGSAD +AL+ G +Y GKD SGT GE L YIF+GPVFYQKLKHM+ HARARGPRAVLTRQPTEGRS+DGGLRLGEMERDCLI YGAS LIMERLM SSDAF+ANVC CGLL Y WCQ CRS EK+ADIRLPYACKLLFQELQSMN++PRL+L+D
Sbjct: 28 IGDKFASRHGQKGVCGLIVPEQDLPFNEYGHAPDLIMNPHGFPSRMTVGKLLELLVGKAAVFEGRQGYSTAFGEEFGSADTAEAASEALIRNGLNYTGKDTFYSGTNGEALDGYIFSGPVFYQKLKHMVLDKAHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASNLIMERLMHSSDAFSANVCMTCGLLQYQNWCQYCRSGEKVADIRLPYACKLLFQELQSMNVLPRLRLKD 270 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8887.16396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig8887.16396.1 ID=prot_H-elongata_contig8887.16396.1|Name=mRNA_H-elongata_contig8887.16396.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=241bpback to top |