prot_H-elongata_contig88812.16393.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88812.16393.1
Unique Nameprot_H-elongata_contig88812.16393.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length111
Homology
[Close]
BLAST of mRNA_H-elongata_contig88812.16393.1 vs. uniprot
Match: D7FRP4_ECTSI (Similar to Iron-containing Alcohol Dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP4_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 8.300e-18
Identity = 49/78 (62.82%), Postives = 57/78 (73.08%), Query Frame = 0 
Query:   40 SAGLPEGDEGIA--DLESLTNPAKDAEYGDDVALQYGVSGSA----VGASDQFFSADTRVVFGVNALEIGLLELYEMG 111
            SAG   G  G    DLESL NPAK+ +YGD+ ALQYGV+  A     GA+  FFSADTRVVFGVNALEIGL+ELY++G
Sbjct:   37 SAGTTRGRRGHCRKDLESLANPAKEKDYGDNSALQYGVTVGAEAAGAGAAHHFFSADTRVVFGVNALEIGLVELYDLG 114
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88812.16393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRP4_ECTSI8.300e-1862.82Similar to Iron-containing Alcohol Dehydrogenase n... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88812contigH-elongata_contig88812:224..1563 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88812.16393.1mRNA_H-elongata_contig88812.16393.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88812 224..1563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88812.16393.1 ID=prot_H-elongata_contig88812.16393.1|Name=mRNA_H-elongata_contig88812.16393.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp
LKHRVFGSWSASGVDPFDRKASPLAIGIERGRFRPRWRLSAGLPEGDEGI
ADLESLTNPAKDAEYGDDVALQYGVSGSAVGASDQFFSADTRVVFGVNAL
EIGLLELYEMG
back to top