prot_H-elongata_contig888.16391.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig888.16391.1
Unique Nameprot_H-elongata_contig888.16391.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length419
Homology
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Match: D8LBX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX8_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 1.490e-114
Identity = 165/197 (83.76%), Postives = 185/197 (93.91%), Query Frame = 0
Query:   22 FPQDKEPTFMFPVNDLEVTISSRGRPFRPPPLARGSATPFIATAYDEFTRDWVSLSIGRLAQRTVPCVTYRAEEPPQYPADDDRVPVKLEDFTVGTDDPEEQAGSKEVRVLHYYQPDYRGLRSSYRRMPDLKLQLLLLDRPAHFMWMEIAAQALTFKVGELEPVFCSLTLYRIMSRLGKKGAEVDVSRSGRVSETFW 218
            +P+DKEPTF+FPVNDLEV+I+ RGRPF+PPPLARGSAT F+ATAYDEFTRDWV+LSIGRL+Q++VPCV YR+EEPPQYPADD +VP K E FTVGTDDPEEQ GSKEVRVLHYY+P Y+G RS+YR+ PDLKLQLLLLDRPAHFMWMEIAAQALTFKVG LEPVFCSLTLYRI+SRLGKKGAE+D+SRSGRVSETFW
Sbjct:    4 YPKDKEPTFIFPVNDLEVSIAPRGRPFQPPPLARGSATTFLATAYDEFTRDWVNLSIGRLSQKSVPCVKYRSEEPPQYPADDHQVPDK-EKFTVGTDDPEEQPGSKEVRVLHYYRPQYKGPRSTYRKTPDLKLQLLLLDRPAHFMWMEIAAQALTFKVGALEPVFCSLTLYRIVSRLGKKGAEMDLSRSGRVSETFW 199          
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Match: D8LBX9_ECTSI (Similar to dedicator of cytokinesis n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX9_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 2.220e-71
Identity = 144/217 (66.36%), Postives = 161/217 (74.19%), Query Frame = 0
Query:  211 GRVSETFWFDLNSGNTRRKFAHVFTRESPSGNPDHIATPPIILTGSSTRATGNA------GSGHSSRKRGVAQDKNVTRCRRALFALDPKNADGRLFLILQLSKVLQGEPEKVGYD-GAHGDGMGVIVKGGSSVL--EAYTKGRSKYNADSAAEEAAQRLWRYRQPLAFGVYQVAPEGRVQGGEDIIMSLYRQNDGLSEEGLMRHDCRGRWGHHCGR 418
            G   E F FDLNS   RRKF++VFTRESP+G PD IATP I +TGSSTRAT  A      G G  SR+RG   ++NVT CRRALFALDPKNADGRLFL+LQLSKVLQGEPEKV  + G  G G G +V    + L   AY+KGRSK NAD+  EEAAQRLWRYRQPLAFGVYQ APEGR+ G E++ MSLYRQNDGLSEEGLMR   R R GH CG+
Sbjct:   40 GPKREHFRFDLNSSTVRRKFSYVFTRESPTGAPDDIATPSISVTGSSTRATTGASGSSGGGRGKGSRRRGTTVERNVTGCRRALFALDPKNADGRLFLVLQLSKVLQGEPEKVRDETGGEGGGRGGVVVFCMAWLFWTAYSKGRSKSNADAPEEEAAQRLWRYRQPLAFGVYQAAPEGRLLGVEEVSMSLYRQNDGLSEEGLMRQGWRRRRGHPCGQ 256          
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Match: A0A836CP33_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP33_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.480e-40
Identity = 85/192 (44.27%), Postives = 112/192 (58.33%), Query Frame = 0
Query:   30 FMFPVNDLEVTISSRGRPFRPPPLARGSATPFIATAYDEFTRDWVSLSIGRLAQRTVPCVTYRAEEPPQYPAD----DDRVPVKLEDFTVGTDDPEEQAGSKEVRVLHYYQPDYRGLRSSYRRMPDLKLQLLLLDRPAHFMWMEIAAQALTFKVGELEPVFCSLTLYRIMSRLGKKGAEVDVSRSGRVSETF 217
            F FP NDLE+ +S R R    P L+    TP + TA DEFTRD+ ++ +GR +   VP V      PP+YP D    +       E+   GTD     + + EVR+L  Y P Y G  S+YR++P   L+ LL DRP+HF W+++    L F VGE EP+FCSLT+YRI  +  KKG E+D   SGRVSETF
Sbjct:    1 FTFPENDLEIEVSPRARSIGIPALSEAECTPQLVTALDEFTRDFRTVVVGRYSDALVPRVARTLLPPPRYPIDAVTGNGEAVGDEEEVPEGTD-----SDTPEVRLLQQYCPTYSGTPSTYRKLPPHDLRALLGDRPSHFTWLKVDCNKLVFGVGEPEPLFCSLTMYRIEGKPTKKGFELDRRNSGRVSETF 187          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBX8_ECTSI1.490e-11483.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LBX9_ECTSI2.220e-7166.36Similar to dedicator of cytokinesis n=1 Tax=Ectoca... [more]
A0A836CP33_9STRA1.480e-4044.27Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026791Dedicator of cytokinesisPANTHERPTHR23317DEDICATOR OF CYTOKINESIS DOCKcoord: 170..396

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig888contigH-elongata_contig888:3305..10394 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig888.16391.1mRNA_H-elongata_contig888.16391.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig888 1296..10475 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig888.16391.1 ID=prot_H-elongata_contig888.16391.1|Name=mRNA_H-elongata_contig888.16391.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=419bp
MGRSRSTTRTTINVAVHVWCLFPQDKEPTFMFPVNDLEVTISSRGRPFRP
PPLARGSATPFIATAYDEFTRDWVSLSIGRLAQRTVPCVTYRAEEPPQYP
ADDDRVPVKLEDFTVGTDDPEEQAGSKEVRVLHYYQPDYRGLRSSYRRMP
DLKLQLLLLDRPAHFMWMEIAAQALTFKVGELEPVFCSLTLYRIMSRLGK
KGAEVDVSRSGRVSETFWFDLNSGNTRRKFAHVFTRESPSGNPDHIATPP
IILTGSSTRATGNAGSGHSSRKRGVAQDKNVTRCRRALFALDPKNADGRL
FLILQLSKVLQGEPEKVGYDGAHGDGMGVIVKGGSSVLEAYTKGRSKYNA
DSAAEEAAQRLWRYRQPLAFGVYQVAPEGRVQGGEDIIMSLYRQNDGLSE
EGLMRHDCRGRWGHHCGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026791DOCK