prot_H-elongata_contig8853.16377.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8853.16377.1
Unique Nameprot_H-elongata_contig8853.16377.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length167
Homology
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: A0A5S9INE9_9BACT (NADAR domain-containing protein n=1 Tax=Candidatus Uabimicrobium amorphum TaxID=2596890 RepID=A0A5S9INE9_9BACT)

HSP 1 Score: 136 bits (343), Expect = 1.070e-37
Identity = 73/166 (43.98%), Postives = 98/166 (59.04%), Query Frame = 0
Query:    1 YDKSSTYICDDVVLFWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNILRQE 166
            +D +   + D  VLFW+PP    +WT S F VD V Y  AE++MM  KARL  DE     I+++D PREQK+LG +VR F   TW +E   IV RGN+AK+SQN +++ AL  T +R L EAS  DK+WGIG   +   A          LLG+ L+ VR  L+ +
Sbjct:   18 FDGTQVVVSDSFVLFWKPPCAFGQWTLSPFEVDGVHYNCAEQYMMAEKARLFQDEKNEKLIMESDCPREQKKLGKRVRGFKEKTWLEERFAIVFRGNMAKFSQNLDLKQALLETENRTLVEASPLDKIWGIGFAANQEEAYDETKWNGLNLLGKVLQEVRQELQSD 183          
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: UPI00148A748D (uncharacterized protein LOC105329780 isoform X1 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A748D)

HSP 1 Score: 139 bits (349), Expect = 8.050e-36
Identity = 73/165 (44.24%), Postives = 99/165 (60.00%), Query Frame = 0
Query:    2 DKSSTYICDDVVLFWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNILRQE 166
            +K S    D    FWQ  S+  +W PS+FVVD VEY  AE++MM  KA L+ D      I+  D P E K+ G  V+ F+   W + C  IV +GNIAK+SQN+++++ L  T  + L EAS +DK+WGIGLR +D RA    T   K LLG+ L  VR+ LR+E
Sbjct:  318 NKQSENEKDKFEYFWQKESVFSQWYPSKFVVDGVEYSCAEQYMMQQKAILMDDMETADIIMALDAPNEMKQYGRYVKNFSQTLWDQHCTRIVEKGNIAKFSQNDDLKMTLFSTYPKTLVEASPYDKVWGIGLRQNDRRAWNKSTWLGKNLLGEILTRVRDKLREE 482          
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: A0A0L0DID5_THETB (NADAR domain-containing protein n=2 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DID5_THETB)

HSP 1 Score: 129 bits (323), Expect = 1.000e-34
Identity = 72/162 (44.44%), Postives = 94/162 (58.02%), Query Frame = 0
Query:    2 DKSSTYICDDVVLFWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNIL 163
            +     + D +VLFW+    + +W P  F VD V Y  AE++MM  KARL GD+  L AIL    PR+ K LG  VR F+   W+ EC  IV  GN+AK+SQ+EE+  AL  T  R +AEAS +DK+WGIGL  +D RA +        LLG+ L  VR  L
Sbjct:   13 ESRDVVMTDSLVLFWK--GFLSQWYPCEFEVDGVVYANAEQYMMAGKARLFGDDEMLEAILAETSPRKIKGLGRCVRNFDDKVWKAECLAIVEAGNVAKFSQSEELAAALLATGTRTIAEASPYDKIWGIGLAPNDRRALSRKNWRGSNLLGKALMAVRRQL 172          
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: A0A0F9K6M9_9ZZZZ (NADAR domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9K6M9_9ZZZZ)

HSP 1 Score: 126 bits (316), Expect = 7.630e-34
Identity = 67/161 (41.61%), Postives = 96/161 (59.63%), Query Frame = 0
Query:    8 ICDDVVLFWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVR-NILRQEN 167
            + DD VLFW  P    +W   +F VD  EY   E++MM  KA    DE +   I+ TD P+ QK +G  V+ F+ + W+  CE IV +GN AK++QN+ ++  +  T DR L EAS +DK+WGIGL  +DP+A  P +     LLG +L +VR +I+  EN
Sbjct:    7 VTDDFVLFWHGP--FSQWYSCQFTVDGTEYNCTEQYMMAKKALFFEDEQSWLKIMATDSPKIQKAVGRTVKNFDLEKWKDVCEEIVYKGNYAKFTQNDYLKSVILGTKDRTLVEASPYDKIWGIGLSETDPKALCPASWQGLNLLGISLMNVRESIISYEN 165          
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: A0A495QTY0_9ACTN (NADAR domain-containing protein n=3 Tax=Actinomadura TaxID=1988 RepID=A0A495QTY0_9ACTN)

HSP 1 Score: 125 bits (314), Expect = 1.980e-33
Identity = 69/157 (43.95%), Postives = 92/157 (58.60%), Query Frame = 0
Query:   11 DVVLFWQPPSIIP----KWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNIL 163
            + + FW   +I P    +W PS F VD   Y  AE +MM  KARL GDE + +AI+ + DP + K+LG +VR F+  TW+     IV +GN+AK+SQ++E+R  L  T DR L EAS  D++WGIGL V DPRA        + LLG  L   R  L
Sbjct:   17 EFLFFWGHKNIDPGCLSQWWPSPFTVDGTTYATAEHYMMAEKARLFGDEKSAAAIVASSDPSQAKKLGRRVRNFDEQTWRDNRLAIVTKGNVAKFSQDDELRDYLLGTRDRVLVEASPVDRIWGIGLGVDDPRAEQVSAWRGQNLLGFALMSARESL 173          
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: A0A1X7UIZ4_AMPQE (NADAR domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UIZ4_AMPQE)

HSP 1 Score: 125 bits (314), Expect = 2.150e-33
Identity = 64/146 (43.84%), Postives = 86/146 (58.90%), Query Frame = 0
Query:   15 FWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVR 160
            FWQ  S   +W PS F +D + +   E++MM  KA L GD+ A   ILDT +PREQK +G  VR F+   W++ C  IV RGN AK++QNE+++  L  T    L EAS  D++WGIGL  S+P+A    T      LGQ +  VR
Sbjct:   20 FWQSQSPFSQWHPSEFKIDGITFCCCEQYMMYQKAILFGDDEAAQKILDTSEPREQKAIGRTVRNFDDKVWKENCRDIVKRGNKAKFTQNEDLKEKLMSTIGTTLVEASPRDRIWGIGLGASNPKALNRKTWRGTNWLGQAITEVR 165          
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: A0A429G873_9ACTN (DUF1768 domain-containing protein n=3 Tax=Actinomadura TaxID=1988 RepID=A0A429G873_9ACTN)

HSP 1 Score: 125 bits (315), Expect = 2.370e-33
Identity = 69/154 (44.81%), Postives = 91/154 (59.09%), Query Frame = 0
Query:   13 VLFWQ---PPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNIL 163
            + FW+   P   + +W  S F VD V Y  AE +MM  KARL GDE A++AI D   P   K LG +V  F    W++    IV+RGN+AK++Q++++R  L  T DR LAEAS  D++WGIGL   DPRA  PD    + LLG+ L  VR  L
Sbjct:   40 LFFWREHGPAGCLSQWHASPFTVDGVRYATAEHYMMAEKARLFGDERAVAAITDAPHPGRAKDLGRRVAAFEEAVWREHRLGIVVRGNLAKFAQHDDLRAYLLGTRDRILAEASPLDRIWGIGLTAGDPRAERPDAWRGENLLGRALMAVRASL 193          
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: K1R4Q0_CRAGI (Phosphopyruvate hydratase n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1R4Q0_CRAGI)

HSP 1 Score: 134 bits (337), Expect = 2.440e-33
Identity = 68/152 (44.74%), Postives = 94/152 (61.84%), Query Frame = 0
Query:   15 FWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNILRQE 166
            FWQ  S+  +W P  FV+D + Y  AE++MM  KA ++GDE +  AI+  DDP E K+ G  V+ FN D W    + IV RGN+ K+SQNEE++  L +T  + L EAS +D++WGIGL   DP+A    T   K LLG+ L  VR  LR++
Sbjct:  705 FWQKHSVFSQWYPCTFVIDGITYNCAEQYMMHQKAEIMGDEDSAKAIMTLDDPSEIKKRGRYVKNFNQDIWGACSQEIVKRGNMEKFSQNEELKQQLLWTHPKTLVEASPYDQIWGIGLSEDDPKAWNKLTWRGKNLLGEILTTVREKLRRD 856          
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: D7FMJ5_ECTSI (NADAR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ5_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 3.150e-33
Identity = 67/159 (42.14%), Postives = 93/159 (58.49%), Query Frame = 0
Query:    8 ICDDVVLFWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNILRQE 166
            + D +VLFW PP +  +W P+ F VD V+Y  AE++MM  KA + GD    + I+ T DP +QKRLG +V  ++   W       VL GN +K++QN  M   L  T D+ LAEAS HDK+WGIG+   DP     +    + LLG+ L +VRN +R E
Sbjct:  132 VTDTMVLFWNPPCVFTQWEPALFEVDGVKYCSAEQYMMACKANVFGDTDIWNKIMSTSDPAQQKRLGKEVANYDHGIWNLCKVQFVLTGNYSKFTQNPGMCDQLLATGDKMLAEASQHDKVWGIGMDAFDPNVERHECWRGQNLLGKILMYVRNKIRWE 290          
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: UPI00178ACF33 (NADAR family protein n=1 Tax=Actinomadura algeriensis TaxID=1679523 RepID=UPI00178ACF33)

HSP 1 Score: 123 bits (309), Expect = 1.060e-32
Identity = 67/154 (43.51%), Postives = 92/154 (59.74%), Query Frame = 0
Query:   13 VLFWQPPSI---IPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNIL 163
            V FW+   +   + +W  S F VD V Y  AE +MM  KARL GDE A +A++    P   K LG +V  F+  TW++    IV+RGN+AK++Q++++R  L  T  R LAEAS  D++WGIGL   DPRA  PD    + LLG+ L  VR+ L
Sbjct:   19 VFFWREHGLTGCLSQWHASPFTVDGVRYATAEHYMMAEKARLFGDERAAAAVIAAPHPGRAKDLGRRVTGFDESTWREHRLDIVVRGNLAKFAQHDDLRAYLVGTRRRILAEASPRDRVWGIGLTADDPRAERPDAWRGENLLGRALMTVRDRL 172          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5S9INE9_9BACT1.070e-3743.98NADAR domain-containing protein n=1 Tax=Candidatus... [more]
UPI00148A748D8.050e-3644.24uncharacterized protein LOC105329780 isoform X1 n=... [more]
A0A0L0DID5_THETB1.000e-3444.44NADAR domain-containing protein n=2 Tax=Thecamonas... [more]
A0A0F9K6M9_9ZZZZ7.630e-3441.61NADAR domain-containing protein n=1 Tax=marine sed... [more]
A0A495QTY0_9ACTN1.980e-3343.95NADAR domain-containing protein n=3 Tax=Actinomadu... [more]
A0A1X7UIZ4_AMPQE2.150e-3343.84NADAR domain-containing protein n=1 Tax=Amphimedon... [more]
A0A429G873_9ACTN2.370e-3344.81DUF1768 domain-containing protein n=3 Tax=Actinoma... [more]
K1R4Q0_CRAGI2.440e-3344.74Phosphopyruvate hydratase n=1 Tax=Crassostrea giga... [more]
D7FMJ5_ECTSI3.150e-3342.14NADAR domain-containing protein n=1 Tax=Ectocarpus... [more]
UPI00178ACF331.060e-3243.51NADAR family protein n=1 Tax=Actinomadura algerien... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012816NADARTIGRFAMTIGR02464TIGR02464coord: 15..163
e-value: 2.2E-32
score: 110.4
IPR012816NADARPFAMPF08719DUF1768coord: 15..164
e-value: 1.8E-32
score: 112.8
IPR037238YbiA-like superfamilyGENE3D1.10.357.40coord: 4..167
e-value: 1.1E-24
score: 88.7
IPR037238YbiA-like superfamilySUPERFAMILY143990YbiA-likecoord: 6..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8853contigH-elongata_contig8853:2693..3193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8853.16377.1mRNA_H-elongata_contig8853.16377.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8853 2693..3193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8853.16377.1 ID=prot_H-elongata_contig8853.16377.1|Name=mRNA_H-elongata_contig8853.16377.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp
YDKSSTYICDDVVLFWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKAR
LLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAK
YSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKK
LLGQTLEHVRNILRQEN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012816NADAR
IPR037238YbiA-like_sf